Array 1 755435-757186 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017194.1 Lactococcus carnosus strain TMW 21612 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 755435 36 100.0 30 .................................... TGCGGTTAAAAGATTGACCTGTATTTGATT 755501 36 100.0 30 .................................... TGCTTTAATATTTTCTCGATACCTATCAGA 755567 36 100.0 30 .................................... CTTTAATATTTTCTCGATACCTATCAGACA 755633 36 100.0 30 .................................... TGTAGAAACAGGTGAAATAGTTAGGGAAAG 755699 36 100.0 30 .................................... TAGTAGCAAAATAATTCCAATTGCAAATGC 755765 36 100.0 30 .................................... AAATAAGTCCAATTGAATACAAGCACATAG 755831 36 100.0 30 .................................... TTTTTGCGCTTTCCAATCCTGCAAAGTTCT 755897 36 100.0 30 .................................... TAAAACATCGTATTACTAGAGCTGAGGACT 755963 36 100.0 30 .................................... CTTTAAGTCCTATCTCCTTATCGGTTTGTT 756029 36 100.0 30 .................................... CATTTTTATTTTCGGCGCATAGGTTTCTTG 756095 36 100.0 30 .................................... ATAAGCTTCGTAGTATACTCGCCAATCTTT 756161 36 100.0 30 .................................... TATCAAAATATCAAAAAGGTATTTATAGTG 756227 36 100.0 30 .................................... TGAACGTATTTTTGAAGAAAATGGCGAGGA 756293 36 100.0 30 .................................... GACCATGAGAGTGAATCGTTTAGAACTTTT 756359 36 100.0 30 .................................... ATCTCTTTTGTTTCCTCCTCTATAACCTCG 756425 36 100.0 30 .................................... GCTGGAACTTACTAGAGAGCGTCCACGTGA 756491 36 100.0 30 .................................... TCCAATTTCACGCGCTCCTTTCTGTTTTAA 756557 36 100.0 30 .................................... TAAGTTAATTGTGGATGAATTAGCTTTAGA 756623 36 97.2 30 ...........................T........ TGATGAAGCTAATAACTTTCAGAACTTTAA 756689 36 100.0 30 .................................... AATCAACTATAATATAATCAAACGCAATCA 756755 36 100.0 30 .................................... AAAGTTCATAAACGTGAACTAGAATGGAGT 756821 36 100.0 30 .................................... TTGAAGATAACATGGAAAACTCAGTAGCGA 756887 36 100.0 30 .................................... ATTTAAAATCGAGTTAGAACCAATTTGTTT 756953 36 100.0 30 .................................... GAAAACACGAACAGTGACGCATACAGACAG 757019 36 100.0 30 .................................... TGAAAATAAAGATGTTCGTATCGAATATAT 757085 36 100.0 30 .................................... CCTGATTTATAAACTCGTCTGCAAATGGCT 757151 36 94.4 0 .............................T.....T | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.7 30 GTTTTAGAGCTGTGTTGAATTGAATGCCTCCAAAAC # Left flank : ATTGGTTACGAATTGTTAGATCATGAGCTAGATTTGGAACAGGATGAAATCACAGTTCAAGAACTCTTCAAAGCACTGGGCGTCCAAATCGAAACATCCAGTGATACAATATTTGAGAAAGTCTTTGAAATTTTGCAGATTTTTAAATATCTATCTAAGAAAAAGATGCTGGTTTTTGTCAATGTTGCAAGCTACTTGACACTTGAAGAATTACAATCCATTCAAGAATTTTCTGAGTTTCAAGATTTGAAAATCATATTTTTAGAGAGATACAAAACATCCGGTTTTCCGCAGTATATATTGGATACAGACTATTTTCTTTGTGCTGAAAATATGGTATAATAAGGTAATATAACAAATTTATTTTTTATCAATTGTCCTTTGAAAATTGAATAAAATGAACAAAAAATACAACACAATAGCATTCATGATTCTGAAGTCCTTCGCTAGGAAAAACAGCAAAAATCTAAGACGTCGACAATAAAAAAATTGGCTCCGAG # Right flank : TTGATTAACGTGATTATATGTAGGTACAAATTTTCAACTCCTTACCTCTATATATTGATCAAAAAAAGACTGATACCGCCCACTAGGCCTATCAGTCTTTTTTATTCCCCAAAATTCTGTTAAACTATAGAAAGTGATGAAAAAATAACGGAGAAAAAATAATTAATGAGTATTTTAACAGTACAAAAACTAAGTCATGGCTTTGGCGATCGTGCGATTTTTGATGATGTCAATTTCCGCTTGCTTAAGGGTGAACATATCGGCTTTGTGGGAGCAAATGGTGAAGGTAAATCGACCTTCATGAATATTATCACGGGTGCTTTACAGCCTGATGAAGGTAAAATCACTTGGTCGACCAAGCATCGTGTGGGCTATATGGATCAGCATGCTGCGCTAGGTAAGGGCAAGACGACTCGTCAATCGCTATCTGAAGCTTTCCAATATCTACTAGATGCCGAAGCTGAGATGAATGACATCTACGGACGCATGGGCGAGATGCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGAATTGAATGCCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //