Array 1 1188873-1191162 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056381.1 Citrobacter sp. RHBSTW-00628 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1188873 29 96.6 32 ............................T TTCATTCCATCCTCCGATATTAACCACGTGCG 1188934 29 100.0 32 ............................. GCTTTCACCTAAATTTGCTGTTCAGGTTTCAA 1188995 29 100.0 32 ............................. CGGGCAATTTGCGTTTCAGGGAACTGGCTCTT 1189056 29 100.0 32 ............................. TCTGCTCTCTCCATCGCCGTCATTGAGGCGAC 1189117 29 100.0 32 ............................. ACAGAGGGAGGCCGCTGTCGGGTGCGGTTCGT 1189178 29 100.0 32 ............................. CTGGCCAATCTGGAAAAATTGCGCGATGCCGT 1189239 29 100.0 32 ............................. CTGAGGTCTGCGCTCGCTGATGAGGTGGAAGA 1189300 29 100.0 32 ............................. ATATTCAGAAACTCGGTGAGCGTCTTGGTTTG 1189361 29 100.0 32 ............................. CCTGTCATTCGTTTTGATGGAAATATGCTTCA 1189422 29 100.0 32 ............................. CAAACCGACGAAAAAATCACGCATACCGTCAT 1189483 29 100.0 32 ............................. TGCATCTGGAAGCTGGCAAAGTAGTTACAAAG 1189544 29 100.0 32 ............................. ACGAGCATACGGAGGTGGTTTGGGTACATGAA 1189605 29 100.0 32 ............................. GCGTAACCCCAGCTTCTCTAGCATCTGCTGAG 1189666 29 100.0 33 ............................. ACCGCTGGCACTGGCTGGAGGCTCGCCATTGGG 1189728 29 100.0 32 ............................. CCATCAACCCTGATTTCAATACGCACGACGAT 1189789 29 100.0 32 ............................. TAAAGTACCAATAGTACATATTTAAGATAAAA 1189850 29 100.0 32 ............................. ATTACCAAAGGCAGCCTGAACGGGTTTCGCGT 1189911 29 100.0 32 ............................. AAACCAGACCCGGCGTTGGATAAGCCTCTGCC 1189972 29 100.0 32 ............................. ACAGCCAGATCAGTGGCGTCTTTATGATCTCG 1190033 29 100.0 32 ............................. CGAACAATTTGAACATAACGAGAACCCCGCCA 1190094 29 100.0 32 ............................. GCGGCGCAGCGGCTGCGGCCATCACGCCACGC 1190155 29 100.0 32 ............................. CCGGGTAAAACCATAGGAAAAATCGGGTATGC 1190216 29 100.0 32 ............................. TTTCGTGGAATTGAGATATAGCGACTGACCGA 1190277 29 100.0 32 ............................. AACGAGGGGGCAATTGAGCCGGACGTTGACGG 1190338 29 100.0 32 ............................. ATATTGAGGACTCGATATCGATTGCGATGATG 1190399 29 100.0 32 ............................. TTGCCCGACCAGGCTTTCACTGACGTGCTCAA 1190460 29 100.0 32 ............................. GCATACGGCAGGATTTACGAAATTACTATCAA 1190521 29 100.0 33 ............................. GGTATTCTTTGTCTGAGTAACTGCCTTTTCTAA 1190583 29 100.0 32 ............................. ATCCTAAACAACAGCTCGCCTATTTGGCCGTA 1190644 29 100.0 32 ............................. ATATCGCCGCAGCACTCACGCAGTTTGCCACC 1190705 29 100.0 32 ............................. CAGGGATAGTCAGCAGCGTTCGCGGTCCCGGC 1190766 29 100.0 32 ............................. GTTTGAATAGTGCATTCATTATTTGCGGGAAC 1190827 29 100.0 32 ............................. AGCGGGGTCGGAGTTACTTTTTGTTTTCGCGT 1190888 29 100.0 34 ............................. ATCGAATATAGACAGTAAGCTAAATTATGCAAGT 1190951 29 100.0 32 ............................. GTGCGCGGCCCCATTTAGCAGGGCGTTTTGCG 1191012 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 1191073 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 1191134 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================== ================== 38 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //