Array 1 224845-224615 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCLF010000002.1 Anaerostipes caccae strain DFI.1.56 GFNFKBDL_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 224844 30 100.0 37 .............................. CACATGAATTTCGGTCGTGCACATAAATTACGGCACC 224777 30 96.7 37 .....................C........ GAAGAAACTGTTGTTCCGGTAGAAGAATTTAATCTTA 224710 30 100.0 36 .............................. TGATGAATTACTACACCTCCAATAATACTTGATTCC 224644 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 99.2 37 GATAAACAAAAACAAGAGTTGTATTGAAAT # Left flank : AAAAGCCAGGCGGTGGTTTTGATTGGGGTGACTTATCAGCAAAGAGGACTGAATGAGTGCTGTGGTTGGTGTAATCAGACAAACTGCCAGGGCTGCAGGGAGAACCAGAGCGTCTGTGTATTTGATCCGGTGGATCTGGGAATCGCATTGGGATCGGCAGTCAGTGTGGCATCCTTAAACCACGTGGACAATCGGATCATGTTTTCTGTTGGAAAAGGAGCACTATCCTTGGGGATGCTGGGACCGGAAGTGAAGATAATCCTTGGAATTCCGTTGGCTGCTGCGGGAAAAGCGCCATATTTTGACCGTAAATAACGGTGTAGTTTTCCCAACCGGCTAAATTTAAAAAGTGGTCCAAAACGTTGATTTTACAGGGGCTGCAGAGGATTTTTAGGATTAGTTTTGAAAATGGACGGCCGGTTGGGAAAAAAGCTGGAAAACGTTGAATATATCTAGGTTTAGAGATATAATGGAAACTGAAGAATGGCTTAAAAACGTTG # Right flank : ACACTTACCTCCTCTTTTGTCAAAGGACGTCCACAGATAAATAAAAATAAAATGAATAATAGATTGCTTATCTTAATTTGAATTGTTTGAAAGTACTATGAAATGTTGTATTATTTTGAAAAATATAGTAAAATAGAACAATAGAGTGGTTTGTGTATAAAAGCTACTAATGAATCATTCCCTCCAGGGCAGTCGTTACGATAGGTACTATCAGCATGTATACGATACGAGGGTGCATACAAAAGAAAGGGGTGGGGCAGTGGATTTACAAGTTTTTGAAATCCGGCTAAAAGTATATCTGTTAGAAGATATCCCTGTAGAAGCAGTTCAAAAGAAGACAGCCGCACTGATTGACATTTGTCTGAGCAGAGACGAAGCACTTCTGAAATTTCATGAGACGAATCAATTTAAGAATTATTCTTTCGGAAATCCATATCCATTGGAAAAGGACAAAATTTATAAAAAGGATAAGGTGTATGTCATAACAATCCGCACCATTG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAAAAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 1 93537-94827 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCLF010000001.1 Anaerostipes caccae strain DFI.1.56 GFNFKBDL_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 93537 32 100.0 34 ................................ TTACCGACTGCTTACTGGGTAAACGGAGATACAG 93603 32 100.0 35 ................................ CTCTTGGAATGGCTTTAGGAATTGAGAAAAACGCC 93670 32 100.0 34 ................................ GTGTAAAATTTATGTTCGCACTCCAGACATTTTC 93736 32 100.0 34 ................................ TTTAAGACGGTGTGACATATCCTCAAAATACAGT 93802 32 100.0 35 ................................ TGTTTATACCAGGAGTAAATATCATTACTTTGCTT 93869 32 100.0 35 ................................ AGGTCGGGTTTGGTGATGTCGCAAAAACATACACC 93936 32 100.0 34 ................................ ATAAGAGAAGACTTAGGATTATCTCAAGCAGGCC 94002 32 100.0 34 ................................ GTAAAATCTCCTGTCCAGGCTAAAATGTCTTGGT 94068 32 100.0 35 ................................ GCCACTGTTGCGAAAGAGGCAGACGTAGACGAATA 94135 32 100.0 34 ................................ CTGTCAATACAAAGGATTTAATACAGATCCATGG 94201 32 100.0 34 ................................ GTGCACATCGTTAGCAATACTTTGTCTTTACTAC 94267 32 100.0 34 ................................ TCCGCTATAGAAAAGGAGGCAAGTATGCAGAAAG 94333 32 100.0 34 ................................ AGATCTGGCGATAAACCGGACGGACGACATAGGC 94399 32 100.0 34 ................................ ATAGATATTTTGTTTAAACCGGTCTGTTGTGATA 94465 32 100.0 33 ................................ CTTAGAGATATCTTTCATTGTTGCTCCCCGCAC 94530 32 100.0 35 ................................ TACATATTTAATAATATTACCAGGCTGCATATCTA 94597 32 100.0 34 ................................ ACCGTGGGAAAAGAAAACACGGTCAAGGGCTTAG 94663 32 100.0 34 ................................ AAAAAAACAGGATGCCTATAAAAATGCTGTAGAG 94729 32 100.0 35 ................................ ATTAATATCACGACTGAAGGATTTGTCAGAGAAGG 94796 32 78.1 0 ......T...A..A.....AA..C....G... | ========== ====== ====== ====== ================================ =================================== ================== 20 32 98.9 34 GTCGTTCCCCTCGTGGGAACGTGGATTGAAAT # Left flank : TGCATATCCGCCTTTTTTATGGAAGTGAGGTAGCAAACGTGTTAGTGTTAATTACTTATGATGTAAATACAGAAACATCTGCGGGAAAGACAAGGCTTCGGAAGGTCGCTAAGCAGTGTGTGAATTATGGGAGACGTGTACAGAATTCGGTATTTGAATGTATACTTGACAATGCCCAAAGCGTGCTGCTAAAGTCTATGCTTACAGATATCATAGATGAGGAAGTAGATAGTTTACGGTTTTACTACTTGGGAAATAATTACAAAACGAAAGTAGAACATGTAGGTGTAAACCGTGGAATTGCAGCGGATGAGACATTAATCTTATAGTGCGAATTGGAAGTGAACACGAAAACCCAGGGAGGCTCGCACCAAAAAAGTTGCACAAAAACAGTATAAATGAAAAGAAAAGTTATCGGTTTATGAATTGAAGATTAGTTGTGGTTAGCGAAATGATACAAATTAAATATATATGTGGAGGTATTTTTGTTGAATTTTGCT # Right flank : TTCATACCAGAATGAATAAGTGATGAAGAATAAGACTTTTCATTTTGATATAAAAGGAAGCATATTCAATGGGGATTAAAGGAATCATGCAGGCCAGACATATTCTATTACTTGCGTCAGGAAAACAGAAAGCCCAGGCTCTGTATGAGGCTGTTTACGGTGATATCACACCGGAAGTCCCGGCATCTATCCTTAAATTACATCCCCATGCTGCCGTATTCGCGGAGGAGGCTCTCTCTGTGATCAAAGAAAAATCTTGAAAATAAAATAGTTTGTTGTTCCTTTGTTGACATTCTTCATGTAAGATAAACCAGAGGTGATAACAATGAACTATAAGATTTTACTCGTCGACGATGACAAAGATTTATTACAGATGCTCCGTAGCTATTTTGAACTGAAGGGCTATCTCATAAAAACAGCGGTCAACGGACTGGAAGCTATGGAGCGGATAAAGGATGCCCCGGATATTATCCTGCTGGATGTCAACATGCCGGGGCTTG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCTCGTGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.40,-5.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 313099-312805 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCLF010000004.1 Anaerostipes caccae strain DFI.1.56 GFNFKBDL_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 313098 30 100.0 37 .............................. TTTTACCATGCACCTGCCTGAAATGCAAGGAGCCGAG 313031 30 100.0 36 .............................. GCCGATAGCATGGATGGAGATGCCGGAGCCGTATAG 312965 30 100.0 35 .............................. ATCTGATACTGTGTTACATTACTAACTTTGTTCCA 312900 30 96.7 36 ................A............. TGGGTAGTGTGCTGGTCTATGGCAGCAAAGTTCTCA 312834 30 76.7 0 ........GT.....AA.........T.TA | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 94.7 36 GATAAACATCAACAAGCGTTGTATTGAAAT # Left flank : CTGCTGGTGAGGCCGTACAGGGAAAGCAAGAAGTTAAAGGTTGATTTGAAAGAGGTAACAGGAACAAGATAATATTGGAAATAGAGAGGTCTGCACCTGGTGTGCAGACCTGCATGATAAAGGAGGTTTCTATGGGAACAATAGCAGTAGGTTTGGCTGTCCTTGGTATTGTCAGTTTGATCGTCAGAAGCATGGTAAAGGATAAGAGACAGGGAAAGTCGATCCAGTGCGGGAATGACTGCAAACATTGCGGCGGGCACTGCGGTCATTGAGAAATGGAGAGTTGTCTCAGCTGACTACATTGAGGCTGGCTGATAATGATTGGATTTCCCAACCACAAATATTTAAATAGAATGGCAGAACCGCAGAAAATGGTGGTTTACAGGCGATTTGAAAGAAAAAACAGAAAATATGAAGGTGGTTGGGAAAAAACAAAGGAAACGTTGATTTTATCAGGGAAACTGGCTATAATAAAAAATAGAAATGGCTTAAAAACGAGG # Right flank : AAGATCTTCTTTCTATGTCCAGGAGACAGAAATTATAATTTCTGCCTTCTATTTTTTTGCCTTCTGTCTGCTGAACCACACCAGTCCACAAGCTGCCGTTTTTATGTTATGATAAAAGAGCAAAACACAAAGGAGGAGCTATGAGATTTGGTTACGATATCCCGGATTCTTTTTGGAGCCTGTTCCGTTCTGTAAACCGGGATCATTACATAGAAGCGCTGCTGAAAATCAGTGAAGAATATGAATATAACAACTACTTTCTGAGCCGGGAGGTCTGTATTCAGGTCCTGAGCGACTGGAATGCGGACAAGCGCATCTGGCTCCAGCGGGAAGAGTTTGAATCAGAACTGGATGTACTGGAGACTCCCCCAAACCGGATACTAAACTGGCTGATTAAGACCGGCTGGCTGAAAAAACTGGATGACTTTTCTACGCTGACATCCAACATTGTCATTCCCGATTACGCGGCCGTTTTTCTCGATGCTTTTGAACAGCTCGTG # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:0, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACATCAACAAGCGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 2 416780-417005 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCLF010000004.1 Anaerostipes caccae strain DFI.1.56 GFNFKBDL_4, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 416780 30 100.0 36 .............................. ATTATCTCGGGATGAAGGCACAAGAAGACTTGCAAA 416846 30 100.0 34 .............................. GTATACAGATTTCTAAATTTACTGCGACTACTGA 416910 30 100.0 36 .............................. GGTCTTTGACAATGTGACGATCCGGGAAATTACAGA 416976 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 100.0 36 GTAAATATACAACTCTTGTTTTTATTTATC # Left flank : TTTATGAGAAGGTAATGGAACAAACGGTAGAGATGGATCTGGGGGTTCATGTTTCTTTTCAAAATGGCCTGTCTCTGCAGTCTAACTACGAAGAATTGGTCGGAGTGAAACTGGAGCCTCAGGAGAAACCTGATAATTTTCAGCTTTATTTTGAAGTGGAAGATTTGGACGCCTGGGAAGATAAGCTGAAAGCTCTGGAAGGGATTGAATTTCTCCATGGAATCAAAGAATATCCATGGGGCCAGCGTGTTATGCGGTTTTATGATTATGACAAATATATCGTAGAAGTGGCAGAGAGCATGGAAAGTGTTGCAAAACGTTTCTTGTCACAGGGGCTCTCCGCAGAAGAAACTGCGGAGCGAACGATGCTTCCGGTTGAGTTTGTTGAGCAGTTTTTATAAATGTATCGAATCAATAGGATATGAAAAAGTAAAAATTTAGGCATTGAGTTTCTTGTGAAATTAAAGAAGCTCAATGCCTTTTCGTATTTTACATTTGTT # Right flank : CCAACGTATTTCTGCCATTCCTTATTTTTATTATAGTCATTTTCCCTGATAAATTCAACGTTTCTCTGAATTTTTCCCAACCGTTTCTGTTCTTCCGGCATTTTCTTTCGAATCGGCTGCCAACCGCCATTTTAAGCGGTCTCCCGGCATTTCGTCTCTTTTTGAGGTTGGGAAACACAATATAAGCCGACCATCCGGCAGCCCTTATTTTCCACTATCTGAATTGATTTGTCTCAGGATGATATTCATAACCGATACCCGAAAGTTTTGTACTGATCTCTCCTGAGTCTACACACAGACTCTTGCAAAGTTCCTCGAAACTGTCATAATAGTCCCTCAGCTGTGTATTGATGTAGCTTAACAGTATCACCGGATCATTCGGCAGCATTTCTTTTTCCTCCTCACTTATGTCACAACCACAAAAAAGCAGTGTTCTTTTCCAAATTCATAATAAATCTTTTGTTTTTCAATGTGATGAATCACATAAATCAGCCCAAAGC # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAATATACAACTCTTGTTTTTATTTATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //