Array 1 187-2076 **** Predicted by CRISPRDetect 2.4 *** >NZ_NNDU01000295.1 Vibrio parahaemolyticus strain F8_4 F8_4_contig295, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 187 28 100.0 32 ............................ CTCGCGGTAAAGGCTGGGGTGTCGATGTTAAG 247 28 100.0 32 ............................ GTAAATGCTGACGTTGGCATTACGTACCGCAT 307 28 100.0 32 ............................ ATTACCTACGACTTGCTCAATGACTAATGTGT 367 28 100.0 32 ............................ CGTAAGCCCACTGTTTACTGCCAACGTTCAAA 427 28 100.0 32 ............................ CGCATATATGAATGCAGATGGTGAGGTAGTTT 487 28 100.0 32 ............................ TCCCTAGCTTCGCTGACAGAGCGAATGTTAGC 547 28 100.0 32 ............................ TAAAGTGGGGTAACGATGCTGGAATGCGAGAA 607 28 100.0 32 ............................ TAAAGTGGGGTAACGATGCTGGAATGCGAGAA 667 28 100.0 32 ............................ TCAACGCGGAAGAACTAAAGCGATACAAAACC 727 28 100.0 33 ............................ AAATTAAATTATAAGCACGTAAAGGTAGCTCAC 788 28 100.0 32 ............................ TACTAATAACGCCAGTCGTTCTCAATTCAAAC 848 28 100.0 32 ............................ TTATCGTTTACTCTGGGATAACTGGGAACGTT 908 28 100.0 32 ............................ TAGTGTAGCCTTAGCCTCGGCTATCTTCTTAG 968 28 100.0 32 ............................ GTCGCGTAAAATCAGCGGCAAATGGCGTTGCA 1028 28 100.0 32 ............................ TTTCTGTAGGCCATTAGCTTTTCGTCAATGGT 1088 28 100.0 32 ............................ TTCCGTTAAGCGACAAAACTGTGCCAGACAAG 1148 28 100.0 32 ............................ AGTAACAACAAAAATTACTCTGCGTACAAAGC 1208 28 100.0 32 ............................ GTGGCGCTTCAATCAATATCCTTGTTTGATAA 1268 28 100.0 32 ............................ ATTTCCTCATCGGCCTTGCAATATTTGCATTG 1328 28 100.0 32 ............................ AACTAGCGCGCTAACGCTTACTCAAATCAAAA 1388 28 100.0 32 ............................ TCAAAAAGGTGAGCCCGTGTCGTTGTCACTGT 1448 28 100.0 32 ............................ ATTCTCGCCAACTACCCAAACATTGACGAAAT 1508 28 100.0 32 ............................ AAAAGCCCGACGCGCCTAGCTGGATAAAAGTC 1568 28 100.0 32 ............................ CCGGAGCTCCGCCAGCTTTGCCCTCGTTACCC 1628 28 100.0 32 ............................ GCAACAAAATAGACTTTATGATCGCTTGATGG 1688 28 100.0 32 ............................ TTATCGTTTGTTATGGAGTAATTGGGAACGTT 1748 28 100.0 32 ............................ ATCACTCAAGCTCTAAGGGGAAACAGTTAGCG 1808 28 100.0 32 ............................ AACCGCGCGCGCCTTTGATTTCTTTAATCATT 1868 28 100.0 32 ............................ CTAAGCGATGTGTTTCCTCGATTACACATCGC 1928 28 100.0 32 ............................ ATGCGCATTTTAAACCTAGCGCTATCAAAGGT 1988 28 100.0 33 ............................ CAAAGAGTTCATTATCTTGCGCAGTGTCACCTG 2049 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 32 28 100.0 32 GTTAACTGCCACACAGGCAGCTTAGAAA # Left flank : AACAAGGCAGTCTGGGAACTGTCCCACAATTTTAACCAACAAAGGGTAAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATAGTTATAAAATACATAGAGTTACAATAGATAGAATTTGGCAAGGTAAAAACATGATTTTTATCCTAACTATCTGTTGTAACTTTCTTTTATTGATTTATTCTATGG # Right flank : AGATCACAGTTTCATCAGCGAGTAGAAGAGCAGCAATTGGAGCTGGATTAAACAAAGGTCCCTTTTAAAGAGCTCACACAAATTCACCTTCTTTAGAAGGTGGTTATATACATAATACATGAGTCTGAATTTATGGTAAGTTTAACTCGCTTAGATCTGTTACAAATAGTAAAGTGTTAATTACTCGTAATGTTGACTCGTCTGGTTTCATAGCATAAGCGCGTTTGTATGATGTTGCGGCTAAGTAGGTTTTGCCCTCAACTTCAGCGATTTTGCCAGCGATGATGTTACTGAACCAAGACTCTCGTATGTTTACAGCTTTTGCTAATAGAGTTTTAGTGTTGCTCAAGTCATCTCTATCGAAGGAACAGACCGCAAGAGCTTCGTAATATATAGGAGCATGGAGCTCATCTCTTATACTCAACAAACTATCATACATCTCCTTTAGCTCGTTGTCTGGAATTGCGAACGGCTGGATTGAGTTAAGAATTTTAGCGGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACTGCCACACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCACACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //