Array 1 295289-295692 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKGQ01000003.1 Bifidobacterium breve strain UMB0915 .16933_8_59.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================================================================================================================= ================== 295289 26 77.8 129 CGGC.....-..............C.. GGAGCGCTCTTCACGGTCGGCACGGTAGTCGTCGTAGTTGTCGTCGGTGGCGTAGCGCGGGTTGCGGTCAGAACCGCGGCCACGGCCGCCACGGGAGCCACCACGGCGGTCATCACGATCGCCACGGTC 295444 27 100.0 21 ........................... CTCGTAGTCATCCTCGAAATC 295492 27 96.3 42 G.......................... ATCATCGCGGGAATCGCGGTCGTCACGGTCGAAGTCGCGGTC 295561 27 100.0 21 ........................... CTCGTAGTCATCCTCGAAATC 295609 27 92.6 30 G.......................G.. GTCATCACGGTCGAAGTCATGGTCATCACG 295666 27 74.1 0 ..............C...GCC..CGC. | ========== ====== ====== ====== =========================== ================================================================================================================================= ================== 6 27 90.1 49 ATCGGAACGACGGCGACGCGGACGATC # Left flank : GCCGCCCAGTCCGACGAGGTGTTCCAGTTGGCTCCGTAGCAATGGCACTGCATAGATGCCGACCGGTCGGGCTATGAATGCCATCAGCAAACGTCATCTCTTAGACGTCCACCATACGAACTTAGAATGACCGATAATTAAGCGTTTTGTGGGATAACAAGCCGATTCCAGCATTTCTCCCCTGTTGTCCCACTTATCCGTGGGACAACACCAACATCAAACGATGTACACTCGCGTCGTCCCATCCCCCAAATCAAAGAATCGTTGGAATAATGCCATTCTTATATTAAGGCCTTGATTCCGCAAACTACAATGTGTGGGACAACACCAGAAAAATGGCGGAATTCCTGCATTGTCCCATTCGGAGACACGATGCGAGAGTGGGTGCTTGGTATGCGAAGGGCCTCTGTACCGAATGAATCGGTACAGAGGCCCTTTGTTTAGCTCCCCTCAGAGAGAGGAGCCAGATAAGAGATCAGTCCTCGAAGGGATCAAAGTCG # Right flank : CACGGCGATCATCACGGCCACGGCTACCACGGCGATCATCACGATCGCCACGGCCACCACGGGAACCGGCGTTGCTCTCCTGATCCTCGAAACCGGGGATGGCCAGGGAAATCTTGCCGCGATCGTCAACGCCCTGCACGACGACCTCAACGGTGTCGCCTTCCTTAAGCACGTCCTCAACGGCGTCGATACGCTCGCCGTTGGCCAGGTTGCGAATCTGGGAGATGTGCAGCAGACCGTCGGTGCCGGGAGTGAGGTTCACGAAAGCACCGAAGCTCGTGGTCTTGACGACCTTGCCGTTGTAGGTCTCGCCGGCCTCAGGCACGTGCGGGTTGGCGATGGAGTCGATGATGGACTTGGCCTTCTCGGCGGCCTCGCCACCTTCGGAGGAGATGAAGACGGTACCGTCATCCTCAATGGCGATCTCAGCACCGGTGTCTTCCTGAATCTGGTTGATCATCTTGCCCTTCGGGCCGATGACCTCGCCGATCTTCTCGACC # Questionable array : NO Score: 4.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.63, 5:0, 6:0.25, 7:-0.46, 8:0.6, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGGAACGACGGCGACGCGGACGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGAACGACGGCGACGCGGACGATC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [26.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //