Array 1 2351280-2343575 **** Predicted by CRISPRDetect 2.4 *** >NC_020888.1 Thalassolituus oleivorans MIL-1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 2351279 32 100.0 36 ................................ AAATTGGATACTTGAGACTTGAACTCACCTTCAGGA 2351211 32 100.0 34 ................................ GGCTATGACGCAGACTAGGCTTGATATTCGGGCT 2351145 32 100.0 35 ................................ ACGCATCGCCGCCGAGTTGTTTGGTATGGGTGCTC 2351078 32 100.0 34 ................................ CAAGTCTCTCATTAACTTCAACAGCAACAACTTC 2351012 32 100.0 34 ................................ TGGTACATCAAGATAGAATGCATTTTGCATATAA 2350946 32 100.0 33 ................................ TGCTGTTTTGCCGGTTAGGTCATCGGCAAGACC 2350881 32 100.0 38 ................................ GCAAAATCTCTCAGGCGTCAAATTAAACTCAGTGCCAA 2350811 32 100.0 35 ................................ AGCGACAGAAGTAGCAAGCGCAGGAACCCCTGAAA 2350744 32 100.0 36 ................................ CCTGAAATTGTTAAGCGCCTTTACCCGATACCAAAG 2350676 32 100.0 35 ................................ TGGTAAAATGATACAGATGCGCCACCCGGCTGTTG 2350609 32 100.0 35 ................................ ATCGAAAGGGAAGTTTGTGTTCGGCGGTATGCAAA 2350542 32 100.0 34 ................................ TTTATCCAGTCGGGGATGGTTGTCATTAAACAAC 2350476 32 100.0 34 ................................ ATGTGAGCGTTGAGAAACACCTATGAGCGAAAGA 2350410 32 100.0 33 ................................ ATACTGATTAAAGCTGAATCCGCGAATCGCCTC 2350345 32 100.0 34 ................................ TTATTAGCTAGTCAGGTTACTGGTAAACCATTCC 2350279 32 100.0 34 ................................ GCCCCAGTAGTTATGCTGCTGGGGCACTCCTTAA 2350213 32 100.0 35 ................................ AGGCTTGGACCGAATTAGGTCTAGCAGCGTTTGAG 2350146 32 100.0 33 ................................ AGATTGCGTCGGTCTCAATAATATAGCTACCTC 2350081 32 100.0 33 ................................ CGGTAATGCTCAACGGCGTCGCCGGTGATTTTT 2350016 32 100.0 34 ................................ AAGAGAAGTCTCTTTCTTCAACTGCGCAGGCTAT 2349950 32 100.0 34 ................................ AAAACCCGGCTTTGCTTTTAAGTGTGGCGAATGG 2349884 32 100.0 34 ................................ AATCAGTTGCTGGCAAGCGTGTTGACCTATCTGG 2349818 32 100.0 34 ................................ ATTGTAGACTTCATCCCTATACGGGAATATAACT 2349752 32 100.0 33 ................................ ATGGCCACAATAGCATTGATAACATTCAATATT 2349687 32 100.0 33 ................................ ATGCCGCCACGACCACCAAAAAGGCATTTATAC 2349622 32 100.0 34 ................................ AGATTAGACACTTGAGACTTAAACTCGCCATCTG 2349556 32 100.0 34 ................................ TTGGTTTAATTCTTTAACAACCCTCTTACTCATT 2349490 32 100.0 34 ................................ ACATTGATCACATCAAGCCTGTCAGCAAGGGCGG 2349424 32 100.0 33 ................................ AATCTTAGCAATGTGCGCTAATACAGATATTAG 2349359 32 100.0 36 ................................ ACGGCTTCAAAGAATGCTTTGCATCTAATGGCTACT 2349291 32 100.0 34 ................................ ATATAAAGAAGCTCGTCACGTGTCGTGTTTTTGT 2349225 32 100.0 35 ................................ TATTAGGGTTCGCGGTACATTTTACAGTTCAGAAT 2349158 32 100.0 34 ................................ TCTTTGAATGCTTGAACACTCACATGCTTGCCGA 2349092 32 100.0 33 ................................ TCGCAATTGCTAGCGAATACAAACTGAACCCCC 2349027 32 100.0 34 ................................ AGTATTAGCGGCTCCAACTTCTCAACCAGAAGAA 2348961 32 100.0 33 ................................ TCAGTAAGAACTACACTGCCAAATTTTACAGTC 2348896 32 100.0 33 ................................ AAATAATCGAATATTGGCAGAGTTAAAAGGTCT 2348831 32 100.0 35 ................................ ATTTTTCCGTGTGTCGCGTATTGTCTGGTGCTGAA 2348764 32 100.0 34 ................................ TGGTGTCATCTGACGGCACACCCCCTGTGCTTTC 2348698 32 100.0 34 ................................ TCTAGCTGTTACTTTGCTCACTGATGTTAAGTGC 2348632 32 100.0 33 ................................ ATCCGGATATTGCATGGCGATTGAATGAGATAT 2348567 32 100.0 35 ................................ TGAAGGCGATGAAGGTATTGAAAGTGATGAAGTTG 2348500 32 100.0 34 ................................ AATCACCGACAATAACAACTGCTGCTGCGTGGGG 2348434 32 100.0 35 ................................ AGCATAGTACGAGCTATGTGCATCCAATTTGGCAA 2348367 32 100.0 34 ................................ AATCGGTGTGACGTTTGGTCAGCACTGGGAATAC 2348301 32 100.0 34 ................................ CAAGGTGGGCACGGGAGTATCACCGGCTATATGT 2348235 32 100.0 34 ................................ GTAGACAATCGCCTTCGTGATCATCGTCTCAATG 2348169 32 100.0 35 ................................ TTGTTTCGGAACTGGAAAAGGCAGCTAGTTGACGT 2348102 32 100.0 36 ................................ TAAGCGCGTTACTTCACAGCCTGCGGTTTGTAGGCG 2348034 32 100.0 33 ................................ AAGAAGAAGCAATCGCGGCAGCTGCATTAACGC 2347969 32 100.0 34 ................................ TGAGTTATCGCTTTGAATATCTCGCCGCGCTGGT 2347903 32 100.0 34 ................................ CCACCGCGACACCGGCAGCGATACCAGCCGACGC 2347837 32 100.0 33 ................................ TCTGAGTTAACGCTCGGCACTCGCGTTGATATT 2347772 32 100.0 36 ................................ GAGCCTCAAAAAGGCGAGCGTTACAACATGATGGTT 2347704 32 100.0 35 ................................ TCGCTGCACTGGTGGCGTCGCCGCAGCGTTACGAC 2347637 32 100.0 33 ................................ AAAAAGTGAGTGACTGGGAATCATGAGTCGAGA 2347572 32 100.0 33 ................................ GATAAGTGTGACTTTGTTTACTGATCGTGACAT 2347507 32 100.0 34 ................................ ATAACAGTTTCCGTATTGGTTTTACTGATTATTG 2347441 32 100.0 34 ................................ TTTTTAGTTCAATTTTCAACTGCTGAGCCTCAAG 2347375 32 100.0 35 ................................ CGCAAACTCCATGCCTTTCGTAACAGCGTTGTAAA 2347308 32 100.0 34 ................................ TTATCAGCCTTTCTTAGCTGCTTTAAGAATGCTG 2347242 32 100.0 35 ................................ CTGTGCATCCGTCAGTTCCAGAACCGCATTGCAGA 2347175 32 100.0 34 ................................ ATACTCAAAAACAAAAGTGGCTTACAACAACTCG 2347109 32 100.0 36 ................................ ATCAATACCCTTATCTCGGATATTTGATTCCATATG 2347041 32 100.0 34 ................................ TTTGCCTTGCAGTGCGTTGCGTAGCAGAGCGAAT 2346975 32 100.0 35 ................................ ACCGTAATGATTGATTTTATCGAGGGCCACAACAA 2346908 32 100.0 33 ................................ TCATAATCAGTTACTCCGTAATTTCGCAATAAC 2346843 32 100.0 34 ................................ ATTGACCAGGGGCAGTACGAAAAATGGTCTCCAG 2346777 32 100.0 33 ................................ ATGCCGGTGATAAAGTGATAATCGACGGCGAGC 2346712 32 100.0 34 ................................ ATAATGACAAGCTAAGAGAAATGGTTATCGTAAA 2346646 32 100.0 35 ................................ AGGAATGCCAACGCACATTATCCGGTGGCAATCAG 2346579 32 100.0 34 ................................ AGGCATATCTCGACCGGCAAATGCGGCGCGAATC 2346513 32 100.0 33 ................................ TAGAAATGTCTCGCTGGAAGCGGAACGAGATAG 2346448 32 100.0 35 ................................ CGTATCAGGATTAAAGCGGCTTGATCAATCGCCAG 2346381 32 100.0 35 ................................ ATTACAGCAAGGGCATTTTGCTGTGACAACCGGAG 2346314 32 100.0 34 ................................ TTATGGATTTAGCAATGAATCTTGGGGATATTGA 2346248 32 100.0 36 ................................ TCGGTGCCTTCCATGGCTGTCGAGAGTTCGTCGCAG 2346180 32 100.0 35 ................................ TGACACGAGAGCCAGAACAGAAAAAAGTGCGCGAC 2346113 32 100.0 34 ................................ TAAAACTGCGGTTAGCGCGGTGCGATCGGCTTCG 2346047 32 100.0 34 ................................ AGGTTGTCATAACTGTTGCAGATGGATCGACAGA 2345981 32 100.0 32 ................................ TCGGTAAGTCGCTTAGTGCTATATGCTGCTGC 2345917 32 100.0 33 ................................ CGTGCCTACGCGCCCCAATTGGCAAGCCATACG 2345852 32 100.0 35 ................................ ACAAGTGCCGTGCTCGAGCAAATGCTTGGCCACTA 2345785 32 100.0 34 ................................ TAGTAAACTGCGCCAAATCGTTATACGCCTTACC 2345719 32 100.0 34 ................................ TAAATCATCGGCTAACTCGTCTTTTTCTTTGCGC 2345653 32 100.0 34 ................................ AGTTTGTTCCTGGGCGGCTTTTACATCAGCGTCG 2345587 32 100.0 34 ................................ CATCGTAACGTGGCGGCGGTAATTGATGCCGCGA 2345521 32 100.0 34 ................................ CACCTGGCACTGACCATATTTTTATTAGTTGGTC 2345455 32 100.0 35 ................................ TGCAAAAGCGCTTGAATACGAGCTAACCCACTTCG 2345388 32 100.0 34 ................................ AATAGTGTCAGCCTCATCTGCCCAACCGCTTATC 2345322 32 100.0 35 ................................ TTGTAAACCACTGGTGCGCAGCGCTCTAGCCGTTA 2345255 32 100.0 33 ................................ AAGACGGGCGCTATGGCGACAGCGCCGCGGTCT 2345190 32 100.0 34 ................................ GGTTTTCGGCAGCAAGATGGGCGCATCACTCAAG 2345124 32 100.0 34 ................................ GGTTTTCGGCAGCAAGATGGGCGCATCACTCAAG 2345058 32 100.0 35 ................................ ATCCGTTTTTTGGAATGGCTACGAGGCATTAGCCG 2344991 32 100.0 36 ................................ CAGTTAACGTTTACGCTATCCAGCTCTTTATAGTGT 2344923 32 100.0 33 ................................ AAGAAAATTGCCGCCATCGCTTTGAATGCGTAC 2344858 32 100.0 33 ................................ AAGACCTTATCAGTCACCGCAACATGAACGCAC 2344793 32 100.0 34 ................................ AAAGCTATACGCAACAGCGCCGTCGTGCGGGCCT 2344727 32 100.0 35 ................................ TCGCACACCCTTCCGCAATACGCCGCGCCAAATTA 2344660 32 100.0 34 ................................ GTTCTCAGTTTTAAGCGTGCTCTCAACCAACCCG 2344594 32 100.0 34 ................................ TGCTCAACAGCAACATGGCGAACAATATTCAGCA 2344528 32 100.0 33 ................................ AAGAAACCAAACCGAGCTATGCCATCGCGCCAA 2344463 32 100.0 33 ................................ AAGAAACCAACCCGCTCACACAAACCGAGCTAT 2344398 32 100.0 34 ................................ CCTAAAACGCCGTCAGGCTGCTTTATCGCTGAAA 2344332 32 100.0 33 ................................ TGAACATTGCTTGTGAACCATCGCCCCCATCAT 2344267 32 100.0 35 ................................ TAGCTGGCCGCCCTCGCTTAAAATCTGACTCTCGT 2344200 32 100.0 35 ................................ GTCATACCCATCAAGACCCCGCGCGGGTTGATCGA 2344133 32 96.9 33 .............A.................. CTGTATGAGTGGGATCCAGTCCTAACGCCAGAT 2344068 32 100.0 35 ................................ AGATTGGTTAGCCGGTACAGAGTCTGCTACGGCGG 2344001 32 100.0 33 ................................ ATAACTGAACGTCTCTACACTGCGAGTAGATAT 2343936 32 100.0 35 ................................ AAAGTGGACTGCTTCGCAGCCCGTTAAAATCTGGG 2343869 32 100.0 34 ................................ ATGGTACGGCACATGGATGCCTAAAATGATTCAG 2343803 32 100.0 33 ................................ TTTTCCCGCTACGGTTAATTCTGATGCAATTTG 2343738 32 100.0 34 ................................ TGGCAATTCAGCACCGGAGAGGACGAGAAAAATC 2343672 32 100.0 34 ................................ AGTTGCGCAATATAAGTAATGATATTTACGCTAT 2343606 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 117 32 100.0 34 GTCGCGTCCTTCACGGGCGCGCGGATAGAAAC # Left flank : CGTGGCTGGTGAAATAATATGTTGATGTTAATAACCTATGATGTCAGCGTAACCACATCCGATGGACGCAGGCGGCTGCGTAATATCGCCAAAGTTTGCCTTGACTATGGCACCCGTGTTCAGAACTCTGTGTTTGAATGTGAAGTTACTCCAGCTCAGTTTGTAGAGTTAAAAAACGAACTGCTTTGTATCTACGATTCTGATGAAGACAGCCTTCGTTTTTACTATCTGGGTAAAAAAGGGCGGGAGAAAGTAGAGCACTTTGGTGCGAAAGCGGTTATCGACCCTCACAATAGCACTTTGATTTTGTGAATCAAAAATCTCTCCGCTTACCTGTGGTTCTCAGTAAAACCCCATAGGTTTAGCGATATCGTAACTATCTGATTTTAAATAACTTATTTAGAATTAATTGATTCTTTAGGTTTACCGTCAAGTAAATTAGCAAGGTTAGCGGAAAGTAAACTCTTTTCGTATGTTCTTTAACAACTTAGACTTGAACA # Right flank : CAGACAATCTATGATGCAACATTCTTTGATGGTTCACTGCCGAACAGGCAGCTTAGAAAACCTACAACTGAAACTCATTTTCCCCGTTAGTTTCGACCACTCTATAGTTCTCTGTCAGCGTTTACACCAATAACTGCGTGATTTTATGAAACTCAGTATAATTTTTATCTATTACCGATTCGGTTATATTACGACTCGATATTATCTAAAGGACTGAATTAATGAACCCTATCAAGGACGTCTTGCGAGAAACAGTAGCTGACGCTAAGTCGAAGAGTCATGCTGATAACGATTACAAGACCTTCAAGCGAGTCGAATCTAAATTCGCCAGAATGAACCGGGCCCGCTTGGCAGCAAAGCTTGAACAGTATCGTGAAGGTGGCTTTCAGATGACTACTGCAGAGTTGATGCGGGAGCGTCACTCGTCAGAAATGTTGGGTAAATTCCTAAGAATTAGTGGATTTTCGCGCCCTGGTCCCAAATGGGAGGCTCATCATATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTTCACGGGCGCGCGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGTCCTTCACGGGCGCGCGGATAGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.90,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //