Array 1 740-56 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBZB01000025.1 Alkaliphilus serpentinus strain LacT Alk_LacT_GGACCC_MERGED.PERFECT_contig_25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 739 30 100.0 35 .............................. TCTTGCTTAGTATTCTCGTTCTGCGGAAGTCATAG 674 30 100.0 34 .............................. ATTTGCTACTTTCCTTAGTACTATCTTATTATAC 610 30 100.0 36 .............................. GATTTAAAATCTATACAATCAGATAAATCAACACCG 544 30 100.0 35 .............................. TCCCTAACTTGACATGGTACAGTATCCCATTCCAA 479 30 100.0 36 .............................. CCTTTTTTTATTACAGATATGGCCGCAACAGGTGAT 413 30 100.0 35 .............................. ACAACTCTAGACGATTACCACAATGCCATATACGG 348 30 100.0 36 .............................. TTCTAATAACCATAAAAAAGAGATAACTTTAATAGT 282 30 100.0 35 .............................. ATTTAGTTGTAGACCCTTGGCCACGCATCTTGCTT 217 30 100.0 35 .............................. TATTCCAAGTTTCGACTTGGTAAGAATTTTTTCTC 152 30 100.0 37 .............................. CCCTTTACAACCTCAACAATGCCATAGTAGCTGCCAT 85 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 100.0 36 GCTGAACCTCAACATTGGATGTATTTAAAT # Left flank : AATGTAAATGAAAAAAGATTATAACTACAATTATACATTTCTCTTTTATGATGTTAATGTTAAAAGAGTTAATAAGGTTTTTAAAGTGTGTAAAAAGTATTTGTCACATTTTCAAAAATCTGTATTTAGGGGAGAGATAACCCCCTCTAAATTGATGTTATTAAAGAGAGACTTAAATAAAGTAATAGATCGAAAGGAGGACTTCGTATGTATTATAAAACTTATGAATGACAATGTTTATGGTGAAGAAATATTAGGGAATAAACAAAACGATACTGGAGAAGATTTAATATTATAGTCTAATGAGCAAATAGTATTGTTTTAGTTTTACCAAGTGACTTATTTGATAATATTCTTCAACACAACTATTTCTAAAGATTATAGTGCTTATTTTACGAATTTATTAATTCTATAGATTTACTTGGTAAAAAAGCTGCATATTCTTGTAATTTAAGGGTTAAAGATGAAAACTCCACTAGAAAAATGGCTTCTTTTCAGTA # Right flank : TTTAGATTTGTTCCCCCTTAATCATTTGATTTAACAGCTGAACCTCAACATTGGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGAACCTCAACATTGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 56-1399 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBZB01000050.1 Alkaliphilus serpentinus strain LacT Alk_LacT_GGACCC_MERGED.PERFECT_contig_50, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 56 30 100.0 37 .............................. AAGGAAATCATCTCTGTGATTATAAGAATAGTCAATA 123 30 100.0 36 .............................. TAAATCCTAGAATGGTTTACCTCATCAATGATGTTA 189 30 100.0 36 .............................. GTTGCTTCATTTAGAATATTAAACCCAAAGCTACAT 255 30 100.0 36 .............................. CTATTTCTTGTAACATTGGCCATGATACTCATTATC 321 30 100.0 37 .............................. TGGACTATGGGGCAGGATCAGAATAAATACCAAAGAC 388 30 100.0 34 .............................. AGGAGATAGATCTTCATGAAGTGAGTGTGTGCAC 452 30 100.0 36 .............................. CCTGGCAACAAAGGGGTGCCAGACAGGATGGTGCTG 518 30 100.0 37 .............................. AATACCTTTGCTACTCTGCAAGCAAAAGCATTAACTA 585 30 100.0 36 .............................. GGTACAGCTTCGAAGTGGATTAAAAGTGGTTTGAGC 651 30 100.0 34 .............................. TCTCCTCGTTCATCGGTGACGTCCTCAGGTGTGA 715 30 96.7 36 ...T.......................... AGAGTTGAATAAATTAATGAATCTTATTAACTGTGG 781 30 96.7 35 ...T.......................... TACTTTACCTTCTCATTGGTTTGCTCATGGATGGC 846 30 96.7 36 ...T.......................... TGATTACGTCCATTCCAATAATCTAAATTTTGATTA 912 30 96.7 34 ...T.......................... CTTTTTATTTAGATAGGGTTTTACCGATGGAGGA 976 30 100.0 36 .............................. AAGCAAGCTCATAAGAGGTTAGATAAACTAGAGGAG 1042 30 100.0 34 .............................. TCTACCCATGCTAAGACAGGCTTTCTTTTATCTT 1106 30 100.0 37 .............................. ATCTTATGATATGAATATACCACCAATAATTGATGTA 1173 30 100.0 34 .............................. GAAAAGGCAGATGCTAATTGGTATCTAAATTGGT 1237 30 100.0 36 .............................. TTGGTTGTTGGTTTGTCATTTCCCCGATTAATTCCT 1303 30 100.0 37 .............................. AGAGGCAGAGGCTAGAAAAGACCAGATGCAAAGAAAA 1370 30 76.7 0 .......A......C.A......A.C..TC | ========== ====== ====== ====== ============================== ===================================== ================== 21 30 98.3 36 GCTGAACCTCAACATTGGATGTATTTAAAT # Left flank : CAACATTGGATGTATTTAAATCGAAAAAGACCTTATTACAGTAATCCTCAACATCG # Right flank : CTTAAAATGCAGATTTAGCTGTCTTTTTTCCTTAAATTACCCATCGTTTGTCTTTATACTTCATTATCAACCCTCAAAAATGCTATAATAAAACCATAGTACTTTTAGGAGCTGATTAAATGGATAGATATGATGAATTTTATGTAGAACATAGAGATAAAATCCTCAGACACCTAAGTAAGATGGAGAAACGACTTTTAGTTCAGTATAATCCACAGGCAACCTATTCAGATTTATTAAATAGGCTTAATAAATCTGAGCTGGATGAGATTAGAAAGGCACTAGGGATAGTTGGAGCTAGCACCTTGAAGAAGCAGGATTTGATAGAAATTTTAGAGCATGAGATACCCTATGGGGTGGGGGCTTTACTGGTAAACATAACTGATGAGGACCTTAAGCTTCTGAAAAAATTGATGGTAAAGGGTGAACTGTTTTTACAACTTAATGAGGTTATTGATACTTTTTGGCTATTTACTAAAGGTTTGGTTTTTTCCGAAGTT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGAACCTCAACATTGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //