Array 1 193135-189619 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSHV01000002.1 Bifidobacterium pseudocatenulatum strain AM36-2AC AM36-2AC.Scaf2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 193134 36 100.0 37 .................................... TCGACGAACTGGTGGCATAGGGCTTCAAACAAGTCAA 193061 36 100.0 34 .................................... AACCAGTTGACGTCCACCGCGCCGCTGATGCCGC 192991 36 100.0 37 .................................... ATCAGAGACGATGCGCGTCTTGCACCCTGCTGCGCAA 192918 36 100.0 38 .................................... TGGTTCGCGAGGCTTCCGACAAAGGAATCACCTTGCAC 192844 36 100.0 35 .................................... TATCGTTCGCAGGCGCATTACGACACGTATGGCCG 192773 36 100.0 36 .................................... TTGATGGTGGTGCCACTCATGGTGCCGGACGCGAAA 192701 36 100.0 39 .................................... CGAAATACCGCTGGAAGCAAGGTCAGTCAGCGGACTGAT 192626 36 100.0 37 .................................... TTTGCCATAGTACAGTCGGTAAACTCGATACCATCCA 192553 36 100.0 37 .................................... TTGCAAGCGCCGTCCGAAACTCCACTGCGCAATACCG 192480 36 100.0 39 .................................... AGGCTTGACATTGGCGCTCAGCAAGCGAATCAGCAACAA 192405 36 100.0 36 .................................... AAAAAAGGCGAAACCGTGACCGTCGAAGACTTCGAC 192333 36 100.0 35 .................................... TGATTGATCCGTAAGCTTTGCCGCATTTCTGGCAG 192262 36 100.0 35 .................................... TTTAAAATATGCGATATTCCTTGTGTGCGAGGGTA 192191 36 100.0 36 .................................... TAGACATTACTATTCCTTTCTTTTAGTCGAACAGAT 192119 36 100.0 35 .................................... GGCGACCAGTCGCACGACCATTCAGAGGCCGTCCG 192048 36 100.0 37 .................................... GTGGAATGCGCTCACTGCGGCGAGGTTGTCGGCACAT 191975 36 100.0 36 .................................... TAGACGGAACAGCCGTCCGTCTCCTGTTCGAAGATT 191903 36 100.0 37 .................................... CGGAAAAGTGTGGGCAAAATGTGGGCACGGCTCACCA 191830 36 100.0 37 .................................... TTCCAGGCGATGAAGCCGAACTTCTGGAACGTGCTGC 191757 36 100.0 37 .................................... TTGGCTCAAGTCGAGTTCTATGCGCTCGTCACTGGAT 191684 36 100.0 38 .................................... TTCAATGATATGCCATTGAATAACATCACACCTAGCGC 191610 36 100.0 36 .................................... TATGACAAATTCCCACAACTCGAATCGGACACCAAA 191538 36 100.0 37 .................................... CCCAACGCCGTGCATCTCGTGTCCGACTGGACCGAAG 191465 36 100.0 36 .................................... GCGCGTGTATTCGGGCATCTCGTGGTAAAGGCGGCG 191393 36 100.0 36 .................................... ATCGACCCAGCTCACCCCGAGATCGACCAGACCGTT 191321 36 100.0 36 .................................... GTTTCCTCCGTGGAGTATTTGCATCCGCCGCTGACT 191249 36 100.0 36 .................................... GGGCTTGATGTCCTGCCATCCGTGAGCGCACCATAC 191177 36 100.0 39 .................................... TTCCGTGGCGAACGCTGGCAATGGGACGCATACGCGACG 191102 36 100.0 36 .................................... TCCATAGGCCTCATCTACGGCGGCCAGGCGAAGACA 191030 36 100.0 36 .................................... ATTCCCGGATACAATGCGGCAGGCGCGGACACTACG 190958 36 100.0 37 .................................... AGCAATCCGGTTCGCCCACAGCCTCTGGAAGGCTGAG 190885 36 100.0 36 .................................... CATCTTGTATTCGCGGCGTGACATGAATAGCCCGAA 190813 36 100.0 38 .................................... GCGCCGACGAGAGACAGCTACCTGCCGACCACGTTGAG 190739 36 97.2 37 ...............................A.... CTCGCAGACCTGCTGACCGGACGCCGCATCATCCCAC 190666 36 100.0 34 .................................... TGAACGCGGTGCTTTTCCGACTATTAGAGGGGGG 190596 36 100.0 37 .................................... CTAGATCTGCCCGAAGGACTGGATACGGGCAAATGCA 190523 36 100.0 36 .................................... CCGGAACAGCCGCAGCTCGACCCGACGCTGACCGAC 190451 36 100.0 38 .................................... GACCAACGTGTGGCCGAGATCACCGGCACGACGGGCGA 190377 36 100.0 38 .................................... GGTCAGCCATCGGTCACCCCTGAAAATGTTTCGCGCGG 190303 36 100.0 35 .................................... CGGGACACTTTGACCGTGCTCGGGTATGTGCAGGA 190232 36 97.2 35 ........................A........... AATGCAATGAGCTGGGTTACCCCATGGCGAGACTC 190161 36 100.0 34 .................................... GAAGAGCATGGAGGGTTTAATCGTTCATGTTGAT 190091 36 100.0 35 .................................... ACACTGCGTTGCGGCATGGCTTGCTCCTTGTTCCA 190020 36 100.0 35 .................................... TTGGACTGGGCAAGTTGGTCCTCAATCTGTTTACG 189949 36 100.0 37 .................................... GAGGTAGCCAGAACGGCGACGGCGTGTTCGCCAACGC 189876 36 97.2 41 ..............T..................... AAGGACCGCACCTTCTTGTACCGCCTCGACTCGTCCGTGAT 189799 36 100.0 37 .................................... ATATCAGCATAAGGACACTCGCCACATGTCCAAGAAT 189726 36 100.0 36 .................................... GCGGAAATCACCGACCGAATCCACCAACTACAGGAA 189654 36 94.4 0 ..................................AG | ========== ====== ====== ====== ==================================== ========================================= ================== 49 36 99.7 37 ATTCCTGAGCTAATCAGCTCAGGACTTCATTGAGGA # Left flank : GATGATAGACGTCGTGATCACGTGGCAAAAATATTACGGCGCTATGGCGAGAGGTTGCAGTATAGCGTGTTCTTTCTGCGGATTCGGCCTGCGAAAATGCTGGTTGTCCAGAATCTAATAGAAGTTAAAATCGATGGTTCAACGGATTCAGTTGTTGTCTGTTTTCTCGGAAAAGAAGAGCAGGCAAGAGAGGGAATGTCATTCTTGGGACGACGGGAATACAGTGATTTAACCATTCCGACGGTTATCTGATTTCACTTTAACCTCTCTGATTGTCTTTCACCTATGTGATTGTGGCTTGATAATTCAAAAGGTTTTTTATGAATTTTGGAATACGAGAGGTGAACCATTGCTGCGACACGCGATGACCTCTCGCATGAGGAAATATAAGGGTTTATGTCTCTTTTTCTGGTGATAAACTGACTGGAGGGAGAGGTATCTGTTCCGCTCTCGCAAAGTTTTTAATTCGCTTAGTCATTAGAGCGGATTAGAATGAGACC # Right flank : TCTATTGGCTCTGATTGTCGTTGTGCGCCCTGGCTTGTGAAGCCGCTTTCTGAATTAGGAATAGCTGCTATCAGGGAGGGCAAGAGAACTATGTCAAATTTGACGTAGATTGTGGCATTTTCTGTGGCCAAGTTCATCCTTGATGAAAGGATTTCTACTTGTAATGTAGTATTGGTGCGTATGATGCTGAGAATTGACGAGCGCGATTTGAGGTCGAAGCTCAATGAGCACAGGAGCCTTATTGGATATGGTTCCAAGGGCGACGGCATCGCCAACATTGTTGCGGGCCTATTCTATATTCCAACAGCATGGACGTTTGCGGAATTGCCGATGCGGGCACGATGCTTATTTGCTGTGCTGGGTGTTGTGATAATCGCGTTGGGTGTCGCGAGTATCGTATGCAAGGGACTCACTTCCGAAAAACTATATAAGGAAATCGAATCGATGAACAGAAGAGCTAGCTCTCTCATTGCGGTCAAGGATGGCATGGACGCGCTGTC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCTAATCAGCTCAGGACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.00,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //