Array 1 128366-129235 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVKZ010000003.1 Acinetobacter sp. TGL-Y2 strain ACIN00253 ACIN00253_c0003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 128366 28 100.0 32 ............................ AGCAGTATTTTGAACTACTTGCTGTTGGTGTG 128426 28 100.0 32 ............................ GTATGCTTCAGAAGTTATAAACCGTATGATGG 128486 28 100.0 33 ............................ AAGCATTAATTAAAAATACAAATCAAATTACGA 128547 28 100.0 32 ............................ AGTTTACCCTTGTTGAATGCTTGCGATATTTG 128607 28 100.0 32 ............................ TGCTATAGTTACGCTATCTTACACAAATAGAG 128667 28 100.0 32 ............................ GTTAGCTACTGCAAATGAGTACGAACCGCGCT 128727 28 100.0 32 ............................ GTCGATAATGTGTTTGTGGATTGTGAACACCA 128787 28 100.0 32 ............................ AAAAGATATAATCTTGAGCCGATTGGATAGCT 128847 28 100.0 32 ............................ ATGAGCAAAGCACGTCTCTTGCGATAATGACA 128907 28 100.0 32 ............................ TCTTAGAGCTTCAAATATGCTGTGTGTGGCTT 128967 28 100.0 32 ............................ GAGAGGGATGTATCTTGAAACTGCATTTGTAG 129027 28 96.4 32 ....................G....... ATATGACAATTTGAACATATACACGTCAAAGC 129087 28 96.4 32 ...........T................ GTCACCCGATCCCAAAACAAGAACATTACCAA 129147 28 100.0 33 ............................ TTTGACACGGTTTTCAGCTTTAGGGCTTGGAAA 129208 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 15 28 99.5 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTTCCAGAAACAGACATGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACTCGTTTTATTGAACTTTAACATCATATCAAAATGATCTTTTTTAGCAGTTTATTGAGTTGCAAGGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTGATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTAAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTGTTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTGATCTAAAATTATA # Right flank : AAATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAAAAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTCAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 87430-86680 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVKZ010000001.1 Acinetobacter sp. TGL-Y2 strain ACIN00253 ACIN00253_c0001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 87429 28 96.4 32 ...........T................ ATATTTCAGTTGTCTTTTCCCCGATTAACCAT 87369 28 96.4 32 ...........T................ TTGAATAGCACCAAATTTCTTTTGAGAATTAT 87309 28 96.4 32 ...........T................ TAAATCCAATCTCATTCGTTAATTTTGATCTG 87249 28 96.4 33 ...........T................ TGATTTAAATTTAGCAAAAACAAATACATAGAT 87188 28 92.9 32 .......G...T................ AATCAATGACCCTGAATACAAGGTGATTGAAA 87128 28 100.0 32 ............................ TTGATATTCAAAACATTTGAACGAACTAAAAA 87068 28 100.0 32 ............................ CGATCTTGGTGAAAACGATCAATACCGTTGGG 87008 28 100.0 33 ............................ ACTCAGGGGCATGAAAAAAATCATACTCTGGGT 86947 28 100.0 32 ............................ ACCAAGAGTTAAAAAGTTGCTTACCACCCATT 86887 28 100.0 32 ............................ AAGCTTTAGGGCTGAATGGAGACCGATTTATT 86827 28 100.0 32 ............................ TGTTTGAACAGGATAGAGGCAGGCAAGCATTT 86767 28 100.0 32 ............................ TTGCTAACATTTTGAATTGCCGAAAAGTCTGA 86707 28 78.6 0 ...........T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================= ================== 13 28 96.7 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : ATGTAATAAGGGATTTAAGCGAAATCAGTAGCTTAAAGCCCTTTTTTTATGCGTATAATAATATGTGATAATATCAGCCTACTAGGTTTAAATGGTGAAATTAGCCGATCTAGCCGAATAATTTACGTCAAGATTACGTCAAGCTTTTGAGTTTAAGATAATGAAAATACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTCATTTTCTAATGATAAATTAAATGAGTGGCATTAAAAACATGTGTGAATATTGGAAAATCTTTTAGTGATAAGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : TATAAACGCCTTAACATCTTAGCTAAATTTAGAAAATTACAAATGATATGGAATAATTTTTATAGTAAATAAAATATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTTCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTGGATGTGAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGTGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTACCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-86.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //