Array 1 4711685-4713958 **** Predicted by CRISPRDetect 2.4 *** >NC_016776.1 Bacteroides fragilis 638R, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 4711685 47 93.6 30 ...A......A.............................G...... TTGATAAATGCGAGTACGCAAACAAACTGT 4711762 47 100.0 30 ............................................... CTATATCTTGATAATCTATACAGCTTATAG 4711839 47 100.0 30 ............................................... TCTTGAAGTTTTCTTGTTGCCTGAACAATG 4711916 47 100.0 30 ............................................... TTCCAGGCTGGAAAGGGCTATGTCGATGGT 4711993 47 100.0 30 ............................................... AAGTTTGTAACTACCAACATTAAGAAGTTA 4712070 47 100.0 30 ............................................... TTCCTCGTAAGACTGCCATACAGCAAACCC 4712147 47 100.0 29 ............................................... TGTTGATTCTCTTTGCCGAACTTTCTCTT 4712223 47 100.0 30 ............................................... GAAGCGGGCGAGGCTTTGACGTATGGAGGC 4712300 47 100.0 29 ............................................... CGCCAAGCAAGTTTAACTTCAGCGAATGA 4712376 47 100.0 30 ............................................... TATTCCCACAGGAACGTATGCAATTGATAT 4712453 47 100.0 29 ............................................... GATGGTGTTTACGAGTGTGATGTATTGGA 4712529 47 100.0 29 ............................................... TGGCGCAAGTATGCAATTTGAAGCCTCGT 4712605 47 100.0 30 ............................................... AGTATTCGATGTAAATAATGGCATGACTGA 4712682 47 100.0 30 ............................................... CTCTTTCAGTTTCTCGAAGTCAGAAGCTAT 4712759 47 100.0 30 ............................................... AGAAGTACACGCATATCCCAGTTCGATAGT 4712836 47 100.0 30 ............................................... TTTGACACCCGGACAATTCCCGGTGCAGAG 4712913 47 100.0 30 ............................................... GTTACAGACCTTACATTTGAAAAGGCTGTC 4712990 47 100.0 30 ............................................... CCAGGTTATCCGGCTTGCCTTTCACGTGGA 4713067 47 100.0 30 ............................................... ACGCTTCGACACGCCTATTTGCGTCAAACC 4713144 47 100.0 30 ............................................... TTCCTCGTATGTTTGCCAAACAGCAAACCC 4713221 47 100.0 30 ............................................... ATTACCTCCGATTTTAGCAAGGTTAACTGA 4713298 47 100.0 30 ............................................... TTATCTGAATAACTTGCTAAAGAAAACAGT 4713375 47 100.0 30 ............................................... TCGTATGAAAGACTTGTTTTATCTCTTAAT 4713452 47 100.0 29 ............................................... AAGACCATCGATAAGTTTACCAGCATTGT 4713528 47 100.0 30 ............................................... CGTATCTGAATCACCAAATCGCCAACTCTT 4713605 47 100.0 29 ............................................... TTTTGAAGCAGGAGAAGTAACAAGAACAA 4713681 47 100.0 30 ............................................... CTTACCTGTACGATAACCAACATCGTTAGC 4713758 47 100.0 30 ............................................... GTTTGATTTGTCCTATGCGCCATTGGAGGA 4713835 47 100.0 30 ............................................... AACTTCTGCAAAAAACACTTCACCCTCTTT 4713912 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 30 47 99.8 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Left flank : GGTGGGAAAGACTTTTATTTCAGGGATGGAAAGAACAAAGCTTTTGCTTCTAAAAGACTTGTTCTTTGAAAACAAAAGACTTGATTTAACAGCGTGTTAAATCAAGTAATAGGAAGAGAGGAAACAAAAGGAGAAAAAGAATTGAAGATGAAGACGATAGAGAAACGAGGGAGTATCTGCCAAAAAAAGGATAAGTGCCGGACCGAAAGGGATAGTTGCGATTAGGGCAAGTATGGGGGCAGGGGATTTTAAAAGCAAGGTTGGGAGTGAAAGCAGGAGGAGTTTACTGCTAAAGACCATATTATCCAATTAACAAACCGATAAACAATCTATTAAATGGTTATTCACAATTCGAAACAGCTTCTAATGGTAACTATATTTAAACCGTCTAATCAGATACACTTAGTAGCATACTTTTCAATTACTAAGTAGAGTACTTTTTAATTATTATCTACACCATCATAAACAGCATATACTATCTGATGAAGACAAAGCGATGC # Right flank : CAGATTTTACATAACACATTGTCCTTCAATAAGTTAAGAGTAAATTAGAAAAAAGAAAAAGAAGACTGCTTCCAACACAAAATCTCGCATTAATGCGAGATTTTGTGTTCTAGAACAACTCCAATTGCTGTCCCGGCGTATTGACATCTTGCACTTTCTTTCCATAAAAAAGCTCTATATCTCCAAATTGTTTATCTGTAATACACATGATTCCGACATGCCCAAATTCTGGGAGAAATGATTTAACTCTTTTTATATGTACTGCTGCATTCTCACTACTGGCACAATGACGCACATAAATGGAAAACTGAAACATCGTAAAACCATCCTTTTGTAGATTCTTTCTAAAATCGGCATAAGCCTTTTTTTCTTTCTTAGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCATTAAAACGATCCATAATCTATCGTTCGGGATAGGAAATTCTCCGAAGCTCTCCATTGAAACATTTATAAAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //