Array 1 10078-12695 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQOD01000125.1 Ligilactobacillus ruminis strain MCC646 NODE_320_length_259299_cov_62.039509, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 10078 30 100.0 35 .............................. GTTAATCAAGCATCAGCTTGGAAAACTGAACACGG 10143 30 100.0 36 .............................. TGTAATAGCTTGCTTTCAAGTAGATGCTATCATTCT 10209 30 100.0 40 .............................. ACTGATAAAAATTCATCGTATAAAGCGACATTACACTTTT 10279 30 100.0 35 .............................. CTTACTGAACCGGAATAATTGACCCCGTTAAGTAC 10344 30 100.0 35 .............................. TAGCCTGGGATATCTTTCCAAACTTCTTCAGTTTC 10409 30 100.0 38 .............................. TTAACTTCTTGTTTTTCATTATATGGAAGTAATTTACG 10477 30 100.0 36 .............................. CATGCTTTTGATAAAACGCACTGCTTCCTGCAAATC 10543 30 100.0 34 .............................. ATTTTCTCTGCATGTCATGAGCGACTTTGCATGT 10607 30 100.0 35 .............................. TTGCCTAAAGGTGCATAAATCAGTGCATAAATTGC 10672 30 100.0 35 .............................. GAAGTTTCTCAATGCAGTTGTCTGTTTTGAACGTT 10737 30 100.0 35 .............................. TGATGAAATCAATCGTCTTCTTGAAAAATGAAGTT 10802 30 100.0 35 .............................. AAAGGCCTTTGATATTATCATTTGAAATGATATTT 10867 30 100.0 37 .............................. TAACGTAACACTTTTTTGCTATTTCCGTTGCATTTTC 10934 30 100.0 35 .............................. ACGCCACCGGGTTCTTTCCTGCCTGTGGCACGATT 10999 30 100.0 37 .............................. TTCATCTTTCATTCTGAATTGTGAGATTACTGCCTTG 11066 30 100.0 37 .............................. TCATAAACGAACTGACTTTGTAAGTTTCACGGTATTC 11133 30 100.0 36 .............................. GTCGGTGCAGGAATCTCAGAATGACTTGTTCACCTT 11199 30 100.0 35 .............................. GAATGATTTTCAGTGTTTTCTGTGATGAGTATTTC 11264 30 100.0 36 .............................. ACACGGAAACCGAAAAGCTAATGCCAAAGTTGAGCT 11330 30 100.0 39 .............................. TGGACGAATGGTTCCTTGAGCAGTCACTTGATACGGTTT 11399 30 100.0 36 .............................. TTTAAACTTGCGGTAACTCGTGGCGTCAAAGTAGTT 11465 30 100.0 38 .............................. AGATGAACTCTAAAGAGTTTTCCATCTTGCTTGATGGA 11533 30 100.0 38 .............................. ATGTTTTATCAAAGTTAGAAAATGTTTATCAAAATTTA 11601 30 100.0 36 .............................. ACAACGAAAGAATGGGCATTGATTTTTGATAAGAAT 11667 30 100.0 40 .............................. GTCAAAAGTAATGACTGTTTTCTATGGTGAGGTAGGCAAC 11737 30 100.0 35 .............................. CAACAGTACGCGCAGAATATGCAACTGATTTATAA 11802 30 100.0 36 .............................. ACAGGCGAGGCAAAAAACGGTAAACGCATTAATTAC 11868 30 100.0 35 .............................. ATTGCAAAATCTTGGCTGTACATATTATTCATGTT 11933 30 100.0 35 .............................. TTACACACGCTTCAATGATGCGCAAACCATGGTCG 11998 30 100.0 38 .............................. CTTATATACCGTGTTATTATATACTTGTAAGGAAGATA 12066 30 100.0 35 .............................. GTGATTGTTGGATGTCTTGCACTGTTGACAATTCC 12131 30 100.0 35 .............................. GTTTCTGCTTTCCCGCAAGTTCACAATGTTGTTCC 12196 30 100.0 36 .............................. AAGGTTACAGGCAAAGGGCAAGTGTATTTCGTGAAC 12262 30 100.0 35 .............................. ATTGATCATTGATTTAAACTCATCTTGTTTAAGTT 12327 30 100.0 35 .............................. AAAATTGACGCTTTAAACAAGCGTATTGATGATTT 12392 30 100.0 36 .............................. ATTGCCGACAATCTTAGCGAAGCAATCGATTATGTC 12458 30 100.0 39 .............................. AAGCGCGATGCGCAACCTCGTTTGCGGCAGGCGGTTCCT 12527 30 100.0 37 .............................. GACTGGCACCGGGCAAGAAAGAGTTGCTGCTGCTCGA 12594 30 100.0 38 .............................. GTGATTGTGGCTTTGAAGTCATGTGCTCTGATAACCAC 12662 30 96.7 0 ........................T..... | AT,C,C [12685,12688,12692] ========== ====== ====== ====== ============================== ======================================== ================== 40 30 99.9 36 GTTTTTATCTAACTGATGAGGAATGTAAAT # Left flank : GTTGAATATTCTCCTTTTAAAATTTGGTGGTGATAAGTTGTATGTAATTTTAGTTTATGATATAAGCGTTGAAAATAATGGGTCCAGGCGTATGAGAAGAGTTTTTAAAATATGTAAAAAATATCTTACTCATATCCAGAACTCTGTTTTTGAGGGAGAACTAACAGTTGCAAAATTAAATAAATTAAAATCAGAATTGTCTAAATGGATAGATAAAGATTTAGATTCAATAATTATTTTTAAAAGCAGAAGTAACAAATGGTTGATCAAAGAGTTTTGGGGTATGGACACATCCGCAGATACTTCAAATTTCTTCTAATATATCTGTCTATGTGTAATAAATAAATTATTACGGTGTTTCGACAGATTCTATAATTACTGATACGAAAGCATCTACTGATGTTCGAGCATATTATATATCAAATAAGCTTCAAATTTTTATTGCATTGACAGAAATACGCTTAAGATATATAGTGGTGTTAGTATTTTCAAGCTATGGA # Right flank : TGGTGACGATAAAAAAATAAAACAACGGAATCATATAAATTTAAATCGTTTTTAGCCTCATCCCCCAAACGCCCCCTCAAATCCTTCCCGACTGACGAACCCATAGGATTCAAGCGTCGTCTTGTCGCTTGAAAGGGCTAAGATGGCCTGTTTCAACGCATCCGTCTCCTCTTTTTCAACGTTGATTGTTTTTGCCAAATGCAGTATGACAACGCAGCCCAGTGCGAACCTGTTCGTTGTCGTCTCTGTATCTTTCATGCGAAAAAGATATTTGGAATATGATTGGGGAGTTACGGGCCTTGTTTCGATTTTGATATCGATCAGGTTGCCGTTGTGACAGCAGCAGTTGCGGTAAAGCGCAATGCAGTCCATCCAACTGATGAGCTCGTTTGCGCTGCATTCATATATGGATGCGATTTCTTTGCGGTTGCGCTTGCTCATGAGCTTATAGATGTGGATCAGTTCTCCGAGCGAAATGTGTTGCGAAAGCTCAAGAAGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAACTGATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //