Array 1 7102609-7103228 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN831790.1 Streptomyces leeuwenhoekii strain type strain (C34 = DSM 42122 = NRRL B-24963) chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 7102609 37 100.0 36 ..................................... CCATACCCACCCTCAACACCCAGGAGCCCCACCCAT 7102682 37 100.0 35 ..................................... GTCGCTCCGGGGCGTCTCCCATGGGTGACCGTAAC 7102754 37 100.0 36 ..................................... ACGTCGACTGTGGCCCCGGCCCGGAGCCCACCGCCG 7102827 37 100.0 36 ..................................... CCGATCCCGGCGGGCAGGACAACCGTGCGGGCGGCG 7102900 37 100.0 38 ..................................... CGTCTGGACGCTGCGGGGGTGCGGGAGATCCTGCGCGG 7102975 37 97.3 36 .............C....................... ACTCCGCCCGCGGCCGCGAACCGCACCGACTCCCTC 7103048 37 100.0 36 ..................................... TCCCACCCTTCCTCGGCGCCGGTGTGCCACTCCCAG 7103121 37 100.0 35 ..................................... CATTTCCATGCGGCGCCTTCGAGGTGCCAGAGCTG 7103193 36 83.8 0 ..........-.TC........A........T....T | ========== ====== ====== ====== ===================================== ====================================== ================== 9 37 97.9 36 CTGGCGGTCGTCCTCCGGGGCGGCCGAGGATCGCAAC # Left flank : GGTTTGGGGTAGTCCATGCGGTCCGGTGTCCCCTGTGTGGTGGCCACGCCGGCACGCCCAGGGCAGGGTGCCGGCACCGCCCCTGCCGTAGATGCGGCCGTCTTCACGCCGAACCCACCGAAGCGGTGAGGCGCTGCAGCGGCACGTCCATCTCAACACTGACAGGCGGCTGTACCGCGCCCCGTCCTATGGTGGTGGCAGGACGCCGTCGGCGCCGGCAACGCCACCACCGTCTGCCTGCTGCCTGTACTTTGGGTAGGCCCTCGACATCGGACAAAGTTCAGCCTCCCTATGACGATCGCGCATTTTGACAGTCTGCGACGCCTGCTACACGGCCGACGGTTGGATGTGTGTTCCTCCCTCATGCCTGCATCGGAACCGGAAGCACACACGCGACACGCGATTCGCACCTAATCTATATGTCCGCATTCGGCGGCTCTGTTACCCGACGCTCACGGACAGAGGAGCGAGCGATAGGCTGTTTCCACTGCTCAAGCAGG # Right flank : TGCACACCACGTCGGTGGCCAGGGTGTGTTGGCCTCCTGGCGGTTGCCTTAAGGGGCCGTTGATCGGTGAGTTGGACCTGCTGCGCCATCGGTCCTTCCTCACTCCTGCTGGCCTTGACCCGGATGCTGGAGAGGAGGTGGCTGCCAGGTCAGCAGGAATAGAACTGCTTCGCGGCTCGGTGTTCCTGGTGCGGGCCAGGGATGCGGGGGCTGCTGATTCGGTCTGTGGCTGGCCGGTGTCCGAGGGGGTGGATACGGTCTTGGTCTTGGCGCGGAGGGCGCCGTGCGCCGTGGTGGGGGAGGAGAAGGTTTAGTGGCGGGTGTGTTGTATGCGCACAGCTTGAGTGGTGTCTCGGGGGTGCGGCACACGCTGGAGGACCACTTGCGTGGTTCGGCTGCGTTGGCGCGGCGTTTCGGGGAGGTGTTCGGGGCCGGGGAGTTGGCGGAGTATCTGGCCTTGGTGCACGACGTGGGCAAGGGGGCGTGTGCGTGGCAGGACG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGCGGTCGTCCTCCGGGGCGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGACGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-15.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 7112194-7113102 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN831790.1 Streptomyces leeuwenhoekii strain type strain (C34 = DSM 42122 = NRRL B-24963) chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 7112194 37 100.0 36 ..................................... TTGTCGCGCTGCGACCGGACCTCGGCCGGGATCTGG 7112267 37 100.0 35 ..................................... AGCGCGCGGGTGAAGATCGGCATCACGGCCGGCTG 7112339 37 100.0 38 ..................................... TCCACCGACGAGATCACTCGCGTCTCCAACCGGGGGGG 7112414 37 100.0 34 ..................................... CCTCCGCACAGTCGTACGATGGCGAGCGTGAGCA 7112485 37 100.0 36 ..................................... CTGTTCTCCGCCGACCGCGCCCACACCGATCTGGGC 7112558 37 100.0 35 ..................................... AACGACGAGACGCTGCGCAAGGCGGCCGAGCTCGC 7112630 37 100.0 36 ..................................... GACGTGCCGGGCTGTGTGGTCGCGCCGCGGGAGCAG 7112703 37 97.3 34 ........T............................ ATGTGGCTGGACACGGACGGCTCCCAGCTGGCGG 7112774 37 97.3 36 ...........G......................... ACCGCCGGGTGGGCCGTGCTCTCCGACACCAACGGC 7112847 37 100.0 34 ..................................... GACGACTCGGGCACCGTCGCCGGGATCGTCACCG 7112918 37 100.0 36 ..................................... TACGTAGGTGGCGCCTGCGTCGCGGATGATGGTTGC 7112991 37 89.2 38 C.........C...T....G................. CACTCCGGGACCACGGCATCCGGGTACACGACGTCCAA 7113066 37 89.2 0 C.........C.......TG................. | ========== ====== ====== ====== ===================================== ====================================== ================== 13 37 97.9 36 GTGGCGGTCGTCCTCCGGGACGGCCGAGGATCGCAAC # Left flank : CTCCCCTGGACGGCCGCCTGATGGACCTGCTGCTCACCTACGACGTCGACACCACCAGTCCAGCTGGCCAACGCCGCCTTCGCCGCGTCGCGAAACTCTGTGAATGCCACGGCCTGCGGGTCCAGAAATCCGTTTTCGAGATCGTCGCCGATGAAAAAACACTCCTCACCCTCCTGCATGCCCTCGACCAGATCATCGACTCCGACACCGACAGCATCCGGCTCTACCGGCTGCCCGCCGACGGCTTCGACCACGTCCAGACTCTCGGCATCGCACAGATCCAGCCCCATCGTGGAGACCTTGTACTCTGACGGGCCATGACGCCCGCTAGACGACCGACGGGCGGATGCGTCTTCCTCCCGCCCGCCTGCTTCGGAACCGGAAGCACACACGCGACACGCGGATCGCACCGAAGCCAAATGTCCGCATTTAGCAGCTCTGTCGCCTGTCACTCCACTACTCGGGAGCAAGCGGTAGGCTGATTTTGCTGCTCAGGCAGC # Right flank : CAAGTGGAAGCGCCTGATCTATGAAGTTTCCCCGTGATCTCGGACACGTGATCGTTACGCCGCGAGGGTGTGCTGATGCCGCTGCCTGGTCTCGGCCGGGGTGAGGTAGCCGAAAGTCCGATGCTTGCGCAGGCGGCGGCGGTTGTAGAAGGTCTCGATGAAGGAGAAGACCTCCGCTCGGGCGGTGGCCCGGTCGGGCCAGGTGCGGGTGCCGATCTCCTCTTTGAGCAGGGCCCAGAAGCTCTCCGCGGCGGCGTTGTCGAAGCACGATCCGGTGCGTCCGCAGCTCTGCCGAAGCCCCAACTCTCGTATCCGTTCCCGGAACCGGGTCGACGTATATTCGCTGCCGCGATCGCTGTGGATCACACAGCCGGTCTCCAGCCCGCCCCGGCCGTGGGCCATGTCGAGGGCATCGACGACGATCTCAGCGCGGTGGTGGTCGGCCATGGCGTAGCCGACGACCTCCCGGGTGGCCAGGTCCAGCCAGCAGGCGAGGTAGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGTCCTCCGGGACGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCGTCCTTCGGGACGACCGAGGATCGCAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-16.30,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //