Array 1 76081-74037 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGEE01000255.1 Streptomyces sp. NRRL F-6491 P443contig7.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 76080 29 100.0 32 ............................. CTCAACAGGCATGGCGGTACCCCGGTACGTGT 76019 29 100.0 32 ............................. CCCCCGGGCCTAACGGTCCGGGGGCTTCTGTC 75958 29 100.0 32 ............................. TGGCTGAGGACACCGATGCCGAAAGCGACGAG 75897 29 100.0 32 ............................. CGTCGTTGCGGTCGATGCGCATGACGACAGCT 75836 29 100.0 32 ............................. AACCACCTCGACCCCGACCCGCGGCTCGCGGC 75775 29 100.0 32 ............................. CGGAATGGCCCCTACAGATTGTTCGAAATCAG 75714 29 96.6 32 ............................T CTCCCCGCCACATACGAAACGGCTCCTCCCTC 75653 29 100.0 32 ............................. GCGCCGCACCTCCTGGTGCGGCGCCTTCTTCG 75592 29 100.0 33 ............................. TTGCGGACGAGGGCCTCCAGTTCAGGGCCGGTG 75530 29 100.0 32 ............................. CCGGCGCAGCTCAGATCCCAGCCGCCGACGTC 75469 29 100.0 32 ............................. TTGGAACAGCTCTCCAACAAGCGCGTAGGCAT 75408 29 100.0 32 ............................. CACGCATTCAAGGTCCTCTCCCCTACCGCCTC 75347 29 100.0 32 ............................. CGGACACCCCCCTGAGCAGCCGAAACGCTCGT 75286 29 100.0 32 ............................. TCGGTCGTCTGGGTGTTCATCCTGCTGCCTTC 75225 29 96.6 33 ............................T GCCGGCCGGTCGTCACGGACACTCCGGTCTGCC 75163 29 96.6 32 ............................C CACATAGGCGGACTTGAAGGCGGAGGCGCGCA 75102 29 100.0 32 ............................. CCCGATGACCAACACCGAGCCCGACCAGACGC 75041 29 100.0 32 ............................. TACGGCAAAGGACTGCTCGACCAGGGCCCGTC 74980 29 100.0 32 ............................. TGGAGCCAGTCCGGAGGCGGCACCTCGACCTT 74919 29 100.0 32 ............................. TCCGTGGCCGGCGGACGAGTCTCCGCGACAGG 74858 29 100.0 32 ............................. CTGCCGCATCTCCGGCTGCGGATCGGCGTACC 74797 29 100.0 32 ............................. ATGCAGTGGCCGACGAACGACGACACCGCGAA 74736 29 100.0 32 ............................. CCCGGCGTTCAGTCCAAGGCGGTCGGCGGGCA 74675 29 100.0 32 ............................. TGGACCAGGGCGCTGCGCCAGGGCTGGGACAG 74614 29 100.0 32 ............................. GTGCCGCTCGTGCCCTGGTCGTCCCGGGCGGC 74553 29 100.0 32 ............................. GGGTTCGGCGTGGACATCCAGCCGTACACCAC 74492 29 96.6 32 ...T......................... ACGCGCTCCAGCAGGTCCGGCGCTGGCTTCCA 74431 29 96.6 32 ...T......................... TGGACCAGGGCGCTGCGCCAGGGCTGGGACAG 74370 29 100.0 32 ............................. ATCAACGAGGTGCTGACCGAGGTCATGGGCCA 74309 29 96.6 32 ..........A.................. ATCCCGGAGAGGTGCTTGCGGGCGAGCGGGTC 74248 29 100.0 32 ............................. GTAGCGGCCTCCTCGGACGCCGGGCCAGAAAA 74187 29 100.0 32 ............................. CGCCAGGCGGACCCGGGCCGGGCGCCCGCCCT 74126 29 100.0 32 ............................. CTCCAGGCCTCAACCGAGACTCGTCCGGACAC 74065 29 89.7 0 .....T..T.............C...... | ========== ====== ====== ====== ============================= ================================= ================== 34 29 99.1 32 GTGCTCTCCGCGCAGGCGGAGGTGGGTCG # Left flank : CTGAGCCTGAAACGGCGGCGTGATCTTCCCCAGATCGTGCAACCCGGCCCAGAACGACAGGACCTGACGTGCCTCCGACTCGGTCAGTTGCAAGGCGTCCGCGATACGCGCACGGACCCGGGAACCCAGCACCACATCCCACAACACCCCGAACACAGCCGCTGCGTCCAGCAGATGGCAGATGACCGGATAAGGGCGCTCCAAGCCACGTTCCTTCGCCCACAGCCGGCAGTCGGGGCCAGCGGCACACACGGGGACGACATCAGGTTCTGTCATGGCATCACAGATAGCAGGCGCCACTGACAACGCACCGATCGACAAATCCTCGTGGTGCAGCGACCGCCTCGGGACACTGCAACAGGGCGTATCACTGTGGCTGTTGTCCCGTAGGCTTCACCGTTGTGACCAAGCTCGCGGAGGTAGATGTGCTGGCGTTTCTCTCGCGAGAAAAGTGTGGTCAAGAAACGGTAAAGCCCTCCTAGAATGCCTGCTCAGGAAGG # Right flank : GCATTGGACTGTGCCCGAGGTCAGTAAATCGTCTTGTGGACTTCGGTGGCGATGCGGAGGGCAAGGCCGGGCTTAGAAGTCGTCTCACTTGGTGCGGACCTCACATGCCGCGCTCTGGGCCGTGCGTCTGGCGGGTGCGTTCTCCCGGCCCTGTGGGCAGGTACTCCAGCTGGACGGGGCCGGGGTAGAAGGTCGCGCTGTCCCAGCCGGCCATCTCCTCACCGATCAGATAGCGATACAGCCACTCGGCGAAGGTCATGGGGTGGCCGGCCCATTCCCCCTCTGACCCCTGCACCACCACGCCGTCGGGAAATCCGTGGACTTCTGGAGCGAGGAAGATGGCGGCTCCCTGGTCCGTGCCGGCGAGTGGGATGAGGCCGTCGGGGGTGCCGAAGGCGATCTGCGGACAGTTGCAGATCACACGGGGATCCTCGTCGGGAGCCAGGTCATAGGACTCCCACAGGCTCTCCGCCCAGGCTCTCGACATCGACCGGATCTCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCAGGCGGAGGTGGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGGTCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.80,-11.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 85943-87007 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGEE01000255.1 Streptomyces sp. NRRL F-6491 P443contig7.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 85943 29 86.2 32 .........A...AG........A..... CACTACGTGCGTGGGGTCGAGATGGTGAACGA 86004 29 93.1 32 ....................A.....C.. CCGGCGGCCCCTGCGGGGTCGCCTTGCCCTGT 86065 29 89.7 32 .C..................T..A..... CCCACTGACCTCCGCTATGTGTTCGTTTTCGA 86126 29 89.7 32 ..A.C........A............... GCCACCGGATCGTTGTGTTCGGATGCCTTCGC 86187 29 86.2 32 ...........A...AT....A....... CATTTGACGCCGCTGCGATCGTCCTCCGCTTC 86248 29 75.9 32 .....T....T..A.....GA.CA..... AGGTCGTCGCGGCGGAGGTCTACGACTCCGTG 86309 29 86.2 31 ......G..AT......A........... CTCGACGGCCGCTGGAGGGGGCCAGGATCAA 86369 29 96.6 32 ........T.................... CTCACCAAGCGCGGGTTCGGACCGTGGGCGCG 86430 29 100.0 32 ............................. GCGACCGGAGCCGGCCGCCCGCCCGAATACTG 86491 29 100.0 32 ............................. CCGCCGGCGCCAAGGTCACCGTCGACGAGCAG 86552 29 100.0 32 ............................. AACCCCCATGGCGCCGTCGGCGTCCACAACGT 86613 29 96.6 32 .................A........... CGGCCCTGGCCGGCTACCAGCCCCACCAGGAC 86674 29 96.6 32 .......T..................... ACCGCGGTACGGTCCGCCTCACCCTGACCGCC 86735 29 100.0 32 ............................. CAGACCTTGCCCACGCCCATGAAGAGGAGGAA 86796 29 96.6 32 ........T.................... GGGCGGCTGTCGTCCGGGTCGTCGTCGAGCCG 86857 29 93.1 32 ..A.......................C.. TACAGCGGGGGCTTGGCGGTCCACGCCGTTCC 86918 29 93.1 32 ..................A.......C.. TTGTCCCGCAGCTCGCGGAGCACCTCGGCCTT 86979 29 96.6 0 ..........................C.. | ========== ====== ====== ====== ============================= ================================ ================== 18 29 93.1 32 GTGCTCTCCGCGCGAGCGGAGGTGGGTCG # Left flank : CCCGCATCGTCAACGACATCCAGACCCTCCTCGCACCCGGCCACCCCATCGACATCCCCGACCCCGAAGAACAACTCGTGGACCTCTGGGACCCGATCACAGGAACCGTCCCCGGCGGCACCAACCACACCCCCAGCCCCTGACCGCCCCCGCAGGAGGACCCCACCACCATGCCCTCGATGATCGTCATCTCCGCCACCGCCGTACCCGACCACCTCCGCGGCGCCCTCACCCGCTGGCTCCTCGAAGTCACCCCCGAGCTGTACATCGGCACCGTCTCCGCCCGCGTCCGTGACGAACTCTGGACCTCCGTCACCGCCTGCACCGCCGACGGCGCCGCCGTCCTTGCCTACCCTGCCGCCAACGAACAAGGCTTCACCCTCCGGACCGTCGGCAACCGACGCCGCGTCCCCATCGACTTCGACGGCCTCACGCTTATGACCTTCAGGAAACAGAGCCAAGAAATGGCAAACTCCTTCTAGAATCGCAGGTCAGGAAGG # Right flank : GGGTCTAAGAAGCCGTTGCTTTTCCGGATCTCATATGTGTGTTTCCGCAGGTCAGGTGTGATGTGCGCGTTGTCGAGGCAGGCTGGGGCCGTCTGATTCGTCGTGGGTGATGTGAGGTGGCGGATGCCGTCGATGCGGGCTGTGATGGAGAGCCGTGAGAGGGCCGCGCTGGCGCGAGTGGAGGAACTGCATGCCGAATTCGAGCGGGTGCGGGCGGCTCTCGCCGACGCAGAAAAGGTGCTGAACCGCCGGGTGATCGGCCTGGAGGAGTATCTCGAGACGCTGACCCAACTGGGAGGTCCCGAGCCCGCCGAGGCTTCAGGGCCGTCCGAGCCTGAGCCTGTTCGTGAGCCGGTGGTGGACGACGCGGCGGCCACGTCGACAGCCAGGGCTCGGCGGGTGGTGGCCCGCAGGAAGGACGGGGTCGAGGTCGACATTCTCGGCCCGGATTACCGACGGATCATGGCCATGCTCGAAAAGACGGGCGGTGACGGATTGTC # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.33, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGGGTCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.80,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //