Array 1 76908-75496 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFAC01000012.1 Microcystis aeruginosa NIES-87, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================== ================== 76907 35 100.0 30 ................................... ATGGAGATACTAATGTATGCTAGCCCCCAC 76842 35 100.0 35 ................................... CACGCCCAAAGGGCGAGAAACCCAACCATAAAGAT 76772 35 100.0 37 ................................... AAAGTCAGGCCGTACTTTTTGTTGACTGCACCCAAAC 76700 35 100.0 40 ................................... CCAAAAGCGCCCAACCACCCACCTTTACGGTCGGTTGCAA 76625 35 100.0 31 ................................... TCTAAGTACGCCCACGCATCAGGAATGTCCT 76559 35 100.0 37 ................................... CAAAAGAAGCATCACCTAACGCAGTAATTTGACTGAC 76487 35 100.0 35 ................................... ATTTTGGACGATAAGAGATTGACCTCCCGTCGATT 76417 35 100.0 38 ................................... GTAAACGGCGCGGCGGACGCGCTCCTGTCCCACGCCTA 76344 35 100.0 46 ................................... TGACATACCATCGATAGACTCACTCCATTCTGGCCACAATATTCGA 76263 35 100.0 41 ................................... AATGCAGTCTCAAGCAATGTATTCTCCTGCTATCTCGTAGC 76187 35 100.0 39 ................................... TTATCAAACAACCACAGCCAACCTCCTTTGCGGTCGGTC 76113 35 100.0 33 ................................... TCTTGGATTTTCACCAGTAGTTGCTTCCTGCAT 76045 35 100.0 42 ................................... CAATAGCATCCCACAGTTCACCGCCTTCAAACAAGCCTGCGT 75968 35 100.0 37 ................................... TAGAATTTTGTAAATGGTAGCGAGTTTTTGCTCGCTT 75896 35 100.0 37 ................................... CGTGTCATGGGTCCCGTGGTGTCTTGCGACCCAACGG 75824 35 100.0 43 ................................... TTTGGCAGCTTCTGAGCGTCCAGGTGCAACGCCATCCACGATT 75746 35 100.0 35 ................................... GAAATCCGCCGCCTCTTGGGACGGGGGTTCCAAAG 75676 35 100.0 37 ................................... CTAAAATTGGTAATTTTGCTGATGGGGGTACAATCGG 75604 35 97.1 39 ..................................T AATGTGTAGGGTTAATTCATGAATTGACCCTACAATTTT 75530 35 74.3 0 T..AA........A..T...T.CC.....A..... | ========== ====== ====== ====== =================================== ============================================== ================== 20 35 98.6 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : ATTACGATTCATCAAGTTGGTCATCGTCGAGATATTTATTCTGATTAGTTTTAGTTTAATTACTTCCATTCCCAAAAATTGCTCCTTCCAAAAGCGATCACACTCCTCCTCATCAAAATCGCCAAAAAAGTTGCTTCTCCCAAAAGTGATCGCTATTCCTCATCATCAAAAAGCGATGTCGTCCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAAGCCCTTAAATCTGCGGGCATTAGTCCATAGGAACAGTGATCAGTTATTAGTTATCAGTGATCAGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATAGTTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGCTTTGCAAAGCTAGT # Right flank : GATACTTAATTAAGAAAAATCAATGAAAATAAAGATTGTTTAAGAAAAATTATTTAAAATTAACACAATAATTAGAAATTTAGTGATAGATATAAAAGTACAAAAGAGCCAATTAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCTTTTCTAGGTCTTTTCAAGGCTGTTGAATATACCTCTTAAACAATCGAGTTTTCTATAGCTTTATGTCCAAATATATAGCCATCACCTTCTCCCCCGTCCAAAGCTTTATTGAAAAATCCCGCAAATTGAGGGACCTGTACGGAGCCTCTCAGATTCTCTCGGATCTGACCAGTACAATCGTCACCCACCGGCCCGAGCAGTACCACCTAATTAGCCCCGGACTGCTATACTCCCAACAGGGAATGCCCAACCGTGTTCTCCTGAAAATCGATAGCGAAATACAGTCCTCCTCCTCCCAGGAAATCATTGCGGAACTGCAACGAGCCTTTTTAAATCGTTGGAAAAATA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 79971-79427 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFAC01000012.1 Microcystis aeruginosa NIES-87, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 79970 35 100.0 40 ................................... CTTGGTTAGCAAGACGGCCACCGTCATTGTTGTGCCTCGC 79895 35 100.0 37 ................................... GTATTGCTTCTCGGCTTCCAATAGGTCCTTGAAAAGT 79823 35 100.0 32 ................................... GCTTATTACGAAGGTTAGGCGAGTTTCCCATT 79756 35 100.0 43 ................................... TCCTTTTTGCAGTAACCAATCGCCCATGATCATTTGTTGATTT 79678 35 100.0 38 ................................... GCAAGCCCCCGAAACTTCCGTGGGCTGCCCACTGGAGT 79605 35 100.0 35 ................................... TAGCTAAACAGGATGATGGCGTGAATTATGCCATC 79535 35 97.1 39 ..................................A GATGTGTAGGGTTAACTCATGAATTAACCCTACAATTTT 79461 35 85.7 0 T..AA........A..T.................. | ========== ====== ====== ====== =================================== =========================================== ================== 8 35 97.9 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : AGAAATTCTCGGCATTATGTTGTCAGATAACCGACAAGCATGGGAATTACAATCCGATGGCAGTTATATTCAGCGTCGTCCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATCTTAATGGACAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTAAGTAGTCATGCAAAATAAATTTCCCAGTGAAGATAGGCAAGAGGCAATAGGCAAGAGGCAAAAGCTTCATCGAAATGTGTAATTAATTTTGCTTGGGTACTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGTTTTGCAAAGCTAGT # Right flank : AGAATGCCAGGGATCAATCCCATCTCATCGGTTAAGAAAAATCCGAGATTTCAGCAGGATTATGCGTCAGTGGGGACAAAAATTTCAGAGGAACTTTAACCAGACTGAACTCGGCAGAATAATTTATGCGGGAGGAGATGATTTTTTGGGCATCGTTTATAATAGCCAATTTCCTGATCCACAACTCGACTCGATCGAGATCGATCGAGTTCTCCACTGGCTACAAACCCCTCATAAGTAGGGTTTGCTGAATAAATCTAAAAACCTTGTTAGATAAGGCTTTTAGACTTTTTTTCTCTCAAAAAGTGCTGACCATTGGAGTGATCGGGGGTAAATTTAGGTACTTTTTCCCTGAAAATTAGGTAATTGGCCACCTCAAAACTGGTAAAACCCCACACCCCACACCCCACACCCCACACCCTGCCACCACCGAAAAACTTATTCAGCAGACCCTAAGTAGGGTTTGCTGAATAAATGTGAAATGTAGGCAAGGTCAGGGT # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 455-117 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFAC01000010.1 Microcystis aeruginosa NIES-87, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 454 36 94.4 39 T...T............................... GAAGCGCGGGGATGGCGTGATTCACGCTTGGCTTAAGAA 379 36 100.0 39 .................................... TCGAAAGGAACCGAAGCGTCACGTCAAGGCGATTCAAGG 304 36 100.0 38 .................................... GTTCCCTTTCACGCTTCCCTATCCTCAATTTCCGAGGC 230 36 100.0 43 .................................... TATGGCAATATATTACCCCCAACAAGCGTACCGTTTCTATTTC 151 35 80.6 0 ..........................-...CGGGTT | ========== ====== ====== ====== ==================================== =========================================== ================== 5 36 95.0 40 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : TTACAGGTTTATCTACCAGGGGCCGGTTGGCGTAATTATGATCCGACTAATCAAATTACCGCCGGCTTTGATTTAATTCGAGTGGCGATCGCTCGTCATCCCGGTCAAATCATACCTCTTTCTGGTTCTTGGTTTGGTGATGCCGATGACTTTTTGTCTATGGATGTTAAAGTGACCATTCGCAAGTTGGGGACGCTGCCGGATTTTGATCCCAGGGAATAGGGCGAATTATAGGGTTTTTTCTTGACCAGCGATCGCAAAAAACGGGTTTCTCGAAGAAACCCGTTTTCTACTCATGCAATAAAGCGAAGATTGCCGTTGTGTTATAGCATTTTATCGATTTTTGTCAAGATATATAGCGTTTCTGATTCACAAGAGGTACATTCCTGATCCTGAACAGCTTAGTCAGCAAAGGTTTAAGTGTGCCGCACAGATGCGAGAACCGCTATATTTGACACAATTTATTAGAAAAAGGGTTTCTTTTAGAAACCCTTTTTCTG # Right flank : TTCAGTTGAATGAGGTACAGCATGGATGACTAGGTAGGCTCTTTAAAAGGGGTATCGCAATAGCAACAATGGGTAAACCAGTGATGGATGTCTCGCAATGTAATCTGACTAAAGGCT # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 36339-37619 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFAC01000002.1 Microcystis aeruginosa NIES-87, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 36339 36 100.0 36 .................................... TTGATTATTAGTTTAATAAACCCGTAGCCGGTTAAA 36411 36 100.0 38 .................................... CTTTCGGCCAATCGGCGGAGGATTCGAGCGAAATATGT 36485 36 100.0 40 .................................... TCGGATTTAAGAATTATTTGTTTGTCGGTAATCTCAATTT 36561 36 100.0 34 .................................... CTCTGGCTAAAGTCTCTAGATTCTTGAGAAATTT 36631 36 100.0 41 .................................... TCATGAATGTCGTCAATGTGCCATTCTACTCCTAATGTCCC 36708 36 100.0 41 .................................... CATAAATTCCCCTCGAAATCAGGACAAAAGTAGATAAAAGA 36785 36 100.0 36 .................................... TGCTCAATTGATAATTTTGAACGGCAATGACTAAAT 36857 36 100.0 36 .................................... GTTCTTCTGTCCCTCTGATAAGTCCTTTGTTTTTAT 36929 36 100.0 37 .................................... TCCTGTTTTGATAGCATCCCCTTCCGCTATTTCTGTT 37002 36 100.0 36 .................................... CTTGATTGGCAGACATAGTTCAATCTACAGAATTTT 37074 36 100.0 35 .................................... AAAGGAATAAAATTAGCCACAAATACAATCATAAG 37145 36 100.0 36 .................................... TATCCGTTACCGTACACTTCTTTTACTCCCCGCTCT 37217 36 100.0 42 .................................... CACACTAGATAAATGTAGGCTTGTCTAGGGGTAATCACTTTA 37295 36 100.0 37 .................................... TTACTTGAGGATTGAATACAGATAAAAAGCCTTGCAT 37368 36 100.0 36 .................................... TTTTTGCTAAACTCAACCTGTAGATTTTTTTGCCGG 37440 36 100.0 37 .................................... ATTACTTGATTCGCTTGCCATTGGTGGCCGCAATTAT 37513 36 100.0 35 .................................... TCGTCTATACGATCACCGTCGTAAAATAACTTAAT 37584 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 18 36 100.0 37 CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Left flank : TACTTCTGTTAATGCGTTGTGATCTTTCCCCGAATGGTAATTTTCCGAGGGATCGAGGGTTTGATAACCGACTCCGGGGTGTCGGACGAGGGTGGCGATCAGGAGCATAAGTCGCTGGAACTCGCGACTATCTCGTTCACGCAGTGTTCTTTCCCTAGGGGATTTGGGGTGCTGAGTCATACAGATGCAATCGGTTCAGTCAAGGGGAAAGCCGATATAAATTTACTTCACTCCGAGGGCTAGAAAATCCGATCAGGACTGGAAAAATTAGCCGCTCGATCGAGGGGTTAAATTATTGGCTTTTTAGGGTATCATCGACTAGCGACGGATAGGGGTGGGAGCAGATAACCTCGGTTTCCGGTAAAATCCCTCGATCTACCACGGGATAAGGGTTTTGTGGTTTATGGGGTTGACTGTGCGACCGTATCTAGCTATAATTAACTTATCCGTCGCAACTGGCTTCCGAACCCCAATCCTGTTCGGACGTTTGCCTACCGGCT # Right flank : CTTTTCGGCTAATTTTTTACTGCACTTGTAGCGATAACTCTCTACTAGCGCTTAGACATTAGCCTCATCTCAACAGACGATTTAAATGCGCGGGCAGCTTATTCTATATAGTAATGTTTAATTTTATTCGCGTAAAAGTTGCTTATGTCCTTACCTGAACTCCCTCTTCATCTTCAATTAACCCAAATGGTTTCGGGTTATTGGCTATCTCAGGCCATCTATGCTGCGGCTAAATTAAGTCTAGCCGAGCATTTAAGCAAAGGAGCGAAATCCTGTCAAGATTTGGCCTCCCTAACTGAGACTAATCCTGCTGCTTTATATCGACTGATGAGAGCATTAGCTAGTGTGGGAATTTTTCAAGAAACTGAATCTCAACAGTTTATACTAACTCCCTTAGCCGAACATTTATCTAGTGACCATCCCCGGTCAGTAAAAGCGACAGCAATTATGTTAGGAGAAGCCCCCCATTATCAAGCCTGGGGAAATGTGTTACATAGTAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 2 401540-400102 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFAC01000002.1 Microcystis aeruginosa NIES-87, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================================================================================================================== ================== 401539 37 94.6 41 ..CG................................. CAGCGAACCCTTAAAAAACTGGAATCACTAGGCTTAATCGA A [401536] 401460 37 100.0 37 ..................................... AAAAAAATGATTAACTATAAACCGGGGTGTAATGCTT 401386 37 100.0 36 ..................................... GGTGGCAGGAACCACCCTACTATTAGGCGAAATTAC 401313 37 100.0 38 ..................................... AAGCCTTGATCGCTCCCCATCGCGATCAGCGATCACCT 401238 37 100.0 34 ..................................... GGGACTGATTCCACAAGCTCAAAGTTGGGAGATG 401167 37 100.0 34 ..................................... GTCTTCAGGAATTAAACCCTTGTAACGGGGAGGC 401096 37 100.0 34 ..................................... ATGGCTATTGGGTACATTGGGCTATGCACTAGGC 401025 37 100.0 34 ..................................... TATCGAGATAGCGATCGCTGATTGAAAAACTAAT 400954 37 100.0 36 ..................................... TCGGGAGTACCAATACTCGATTAAGGAATCTTGCCA 400881 37 100.0 34 ..................................... TTTTCGATTGGATTCTCTGGCTCTCGCTCTCCTT 400810 37 100.0 36 ..................................... AATGAATAACAGACCACCGGGAAAAAATTCCCCCCC 400737 37 100.0 131 ..................................... GCGGGGAACGCGCTATTTTGACCAAAAATGCCCCAAGTTCCAATTAATCTTATAGCGGTAAGCGCTTGAGTGAGATACAAACCAAGCTTTGCCTAGCATGGTTTATAGCTCGTGAAACTGTACCTCATACG 400569 37 70.3 36 AC.G..CACCGCTA....................... GGCCCGCCAATTTTTACAGCAATTAGATCGAGAGTT 400496 37 100.0 34 ..................................... GACAAATTACTTAGGAGTAAAAAATGCCAGAATT 400425 37 100.0 36 ..................................... TGGTGACTTTTATGAATACAGTTGTACTTATCCCGC 400352 37 100.0 35 ..................................... TAAATGCGGTTTGAGCCACTAATCCAGAGACAATG 400280 37 97.3 34 .......................T............. ATAGGCGGGAACCAGACGATGGATTTATACAACA 400209 37 97.3 34 .......................T............. AATTGTCCTTAATTTGATGTCTTTTGTGGCTCAC 400138 37 97.3 0 .......................T............. | ========== ====== ====== ====== ===================================== =================================================================================================================================== ================== 19 37 97.7 41 GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Left flank : AAACTTTGGGTCGCCTGGTATTGATAAATTAGTAGCCCGGTTCCAATTAATCTTAAACCCTACTAGGGATTGAAACATCGGTAAACATTAACCCATTTAGGACTAGAAAAGTTCCAATTAATCTTAAACCCTACTAGGGATTGAAACGCACCGCTGCAGAGCGTATTGATTTCATTATAAATGATTAATGTTCCAATTAATCTTAAACCCTACTAGGGATTGAAACAACAGCTTTATTCATGGTAATATTTTCCATTGTGGGTTCCAATTAATCCTGACAGGGGGACAAGCGAGCTAGAAAACTTGCCAACAAAGGCTTCTGGCTTCTCTCGCTAGAAATAGATCTAGCGATTCTAGGCAAAAAGCTAACGAAAGAATTAGGGATAGGAGCGAGCTTACTAGGAATTATTATTAATAAGTGAGAGATGGTGCGGCGAACTTTTTCGAGCTAAAACCATGAAAAGCTTATGCTATATGGATTTCAGCCTTCTTGTCCCCCT # Right flank : ATATTTGCCTAAGTCAGTACCGATAATTATTTTTAGTTCCAATTATAGTCATTTCAAATAAGTGTGAGACGGGGGAAAAATAAGGTAAAATAAAGAGAAACGAGCAACCCATACAGAAAAATGTCTTATAGCCTAGACTTGAGAAAAAAAGTAATCGATTATGTAGAGAATGGGGGAAGCATAACCAAAGCCGCCGCTCTATTTAATATAGGAAGAGCCACGATATATAGATGGCTAGGTAGGGAAAAACTGGAAGCAACAAAAGTAAAACACCGTCAGAGAAAGCTGGACTGGAAAGCACTGTCAAAAGATGTCCAAGAAAATCCCGAGGCAAGATTAAGAGACAGAGCCGAGAAGTTTGGAGTGAGACCAAGTGCCATTTGCTATGCCTTAAAAAAAATGAAAATTACCAGAAAAAAGAAGGAACTTCGTTATAGAGAAAGAAACCGAGAAGAAAGAATGAAATACTACAGAGTGCTGAGAGAATTGATTAAAACAGA # Questionable array : NO Score: 8.66 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:-0.48, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : NA // Array 3 404024-401814 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFAC01000002.1 Microcystis aeruginosa NIES-87, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 404023 37 100.0 34 ..................................... TAGTAACAACTACAGTCCTTACTGTTGCCTAGGA 403952 37 100.0 35 ..................................... ATCAATTATCAGCGATTATCAAGTAATTAGGAGTA 403880 37 100.0 36 ..................................... CCGGAAGGGAATTTGTGATCGCTTTTGATCAAGATA 403807 37 100.0 36 ..................................... AGTTATTACCAAGATGCTAATCCCAGCTAAAGCCCT 403734 37 100.0 37 ..................................... ACAAGAGGCGATCGAGGTTTGCATCGCGGCGGGTCGC 403660 37 100.0 33 ..................................... CACACACCTCCCTGAATCTCGATCGCAACTCGG 403590 37 100.0 34 ..................................... TACGATTTTTGATAGAATATGGCAAAAGCCGATA 403519 37 100.0 34 ..................................... CGGCTTCTCAGACCCGCTTGCATCTCAGCAATCA 403448 37 100.0 36 ..................................... TCCCTAAGTATAAGGCGGCGCTAGAAGATAAAAAGA 403375 37 100.0 34 ..................................... GGGATGGGCGAAGCCGACGGGTGCGCTTTTGGTG 403304 37 100.0 36 ..................................... AAATTCAGTGTTTGAGTTGGCGCAGTCCCCGTAATC 403231 37 100.0 34 ..................................... ACTACACGGGACCCAATCCTGAAAGCCTTACCAC 403160 37 100.0 35 ..................................... TTAGTTTCTAGCTTATCAATTGGCCCGTCTAACAC 403088 37 100.0 35 ..................................... AAGCTAATACTCTCTCCCTCTTGTTGATTAGATTC 403016 37 100.0 34 ..................................... CGATACTTTATTAGACAGGGAGATACAGTTTATT 402945 37 100.0 34 ..................................... AAATAATTAACTATTTGGTTATTAAAGATTTGAC 402874 37 100.0 34 ..................................... GATAACCTTATTAACAATCTATCTACAAACTAAC 402803 37 100.0 36 ..................................... GGGAACTTAATAGGACAGCCAACAGATAAAGGTAAT 402730 37 100.0 34 ..................................... CCCTTGCTGGGAATCTCGTAGTAGCGTCCGCCAC 402659 37 100.0 39 ..................................... CTGTAACATTCCCCACCTAAAATCTTGCGTGACAGCCCC 402583 37 100.0 36 ..................................... AAATGTGGAATCTCTAGAGGGGGATACAGCCCTAGA 402510 37 100.0 34 ..................................... AAAATTAATCTGGAAAATAGAAAATATGCTGAAT 402439 37 100.0 39 ..................................... ACGGGAAAAAAGCAGTGGATAGACAAAATAGACAATCAG 402363 37 100.0 36 ..................................... TAAGTGAGTTTCGCCACGTCGGATGTTTAAACCCAT 402290 37 100.0 37 ..................................... AAGGAATTTACGGAAGAAAGAGGGATCACAGTCTATA 402216 37 100.0 36 ..................................... ATCCAGAAATTCTCACGCATTTGTTGATATAAACCA 402143 37 100.0 34 ..................................... TTGGAAATCGACAATCTCCGAACCAATGAGCGAT 402072 37 100.0 35 ..................................... TTTGGGTCGCCTGGTATTGATAAATTAGTAGCCCG 402000 37 100.0 34 ..................................... ATCGGTAAACATTAACCCATTTAGGACTAGAAAA 401929 37 100.0 42 ..................................... GCACCGCTGCAGAGCGTATTGATTTCATTATAAATGATTAAT 401850 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 31 37 100.0 35 GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Left flank : GAAATCGAAAAATAGAAAATTAACAGAGTTAGAAAAAGAGTATAACAAGGCTTTAGCCAAAGAAAGGATTATCATTGAACATATAAATAGGAAACTCAAAACCTTTAAAATCTTATCCTGTAAATATCGGAATCGTCGTCGAAGATATAGTTTAAGAGTTAACTTGTTGGCGGCTATTTATAACTGTGAGTTAGGGATAGGTATAGCAGCTTCTTAAAAGTTGCCTAAAGATTAATCAAGTCAAGGAGAATTTATTCTCAATTTTTATAATTGAGATAGTTTGTGCCGATTAAATAAAGAGGTTTTGATAACCAAATTAAAGCAGCTCTAAAGAGTTTTGAGTTAAAAGTTAAACTTCAAGTTTTCATTCAGGATGAATGTACTGATTAACTAATTTTTTGGGGAAAATTAGTCAACCCATCATTATAACATATAATTAATTTGCAAGAGTTCTATTGAAACTGGCACTCAAGATAGAGTGCCAGATATGGCGCATCCGA # Right flank : AACAGCTTTATTCATGGTAATATTTTCCATTGTGGGTTCCAATTAATCCTGACAGGGGGACAAGCGAGCTAGAAAACTTGCCAACAAAGGCTTCTGGCTTCTCTCGCTAGAAATAGATCTAGCGATTCTAGGCAAAAAGCTAACGAAAGAATTAGGGATAGGAGCGAGCTTACTAGGAATTATTATTAATAAGTGAGAGATGGTGCGGCGAACTTTTTCGAGCTAAAACCATGAAAAGCTTATGCTATATGGATTTCAGCCTTCTTGTCCCCCTGTCAGCAATTAATCTTAAACCCTACTAGGGATTGAAACCAGCGAACCCTTAAAAAACTGGAATCACTAGGCTTAATCGAGTTCCAATTAATCTTAAACCCTACTAGGGATTGAAACAAAAAAATGATTAACTATAAACCGGGGTGTAATGCTTGTTCCAATTAATCTTAAACCCTACTAGGGATTGAAACGGTGGCAGGAACCACCCTACTATTAGGCGAAATTAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 4 414174-405480 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFAC01000002.1 Microcystis aeruginosa NIES-87, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================================================================== ================== 414173 37 100.0 36 ..................................... TGGAACATAGCTTGCGAGATTTAATTGGAGATTATG 414100 37 100.0 35 ..................................... TTTAAAAATTAAGATTAGAAAAACAAAAAATGATT 414028 37 100.0 35 ..................................... AATCGCTTAGTAACCAGAGCATCGAAAAAGCCCTT 413956 37 100.0 37 ..................................... AACGCTGGTTCGGTAGCCAATGTAACAAATGGATCAG 413882 37 100.0 34 ..................................... CTTGTTTTCCTTCGGTACGTTTGATCGGGAAATA 413811 37 100.0 36 ..................................... AATTAAATTTTTCGTATTCTCTTAATATTATTTGGG 413738 37 100.0 35 ..................................... AGAAACCCCAGTAACTTGCCAAAAGCTCATTGCAG 413666 37 100.0 34 ..................................... ACCTGCAAGGGAATATCACACTAACCATTAGTGG 413595 37 100.0 34 ..................................... ATCAGATCAGACATCGGCTCGCTGTACCGACTTA 413524 37 100.0 34 ..................................... GAATTGCAGTTTAATGAAACTTTTCGATCTCAGC 413453 37 100.0 35 ..................................... TACTGTCAATTACGCCATCTTTTCGCATATTTTCT 413381 37 100.0 35 ..................................... AAATCAATACCGATCAGGTGGCAAAGGTAACGACC 413309 37 100.0 34 ..................................... ATCTAAGCTACCATCTAAGCTATTGCCTAAGCTT 413238 37 100.0 35 ..................................... AAAATTATGGACGGGTTTAACCGGCACGGTTTCAG 413166 37 100.0 36 ..................................... ATAGCTCCAGTCTAAATCTGGGTATTTTTCTTTACA 413093 37 100.0 35 ..................................... TTCCTTTTAAGTATATCTCAAAAAAGAAAATTCAG 413021 37 100.0 36 ..................................... TTAGATACTTACGAGAATTTATTACCTTGTTCACAA 412948 37 100.0 37 ..................................... ATCAATCGTATCAAGGACAATCTCAATCAAATTAAGT 412874 37 100.0 35 ..................................... TTGACAAGCGTATTTTGCGGCTTCATAACTACAAA 412802 37 100.0 35 ..................................... TTACCTTCAATTTTTTGCTGTTCTTCTGCGCTAAC 412730 37 100.0 37 ..................................... AAAAGATAACAGTGCTGTCGTTCCTGCTACGGCTAGT 412656 37 100.0 36 ..................................... ATTTGTTTGATTAGGTGCTAAAAAACGACCATTAAG 412583 37 100.0 35 ..................................... TTTAATCTGATTGGGACTCCCTGAAAAATTCCCAC 412511 37 100.0 37 ..................................... TTCTTATCGCAGCAGAACGTGAATCAAAAGCTATCTG 412437 37 100.0 34 ..................................... AGTTTTGTCATCTTTTTTACTCTCCTAATAGGGG 412366 37 100.0 35 ..................................... AGAAAAAATCATTAGCTTAGAGCATAGGCTAAATG 412294 37 100.0 34 ..................................... TTAGGGGGGATTGATCGGGGAACATTAAAGGGTA 412223 37 100.0 36 ..................................... AGCATACCGTGACACTTCCGGGGTTGACCCGGAAGC 412150 37 100.0 34 ..................................... TTAAACTCGATTGAACGAGCGGTTTCCCGGACTT 412079 37 100.0 36 ..................................... TAATACTTCTTAAATCTTTAGCAATTACTGATAAAA 412006 37 100.0 34 ..................................... CCCTCAATTTCTCTACTCTCCCAAACCCTTAGAG 411935 37 100.0 34 ..................................... ACATTCCTTCGCGGTTTCTTCTGTAAAATATTTC 411864 37 97.3 34 ............T........................ TACGGTATTCTACACAGCCCAGAATATAAAACCC 411793 37 100.0 36 ..................................... TTGATCACGATGGTATTGAACTGATTATCAATACCG 411720 37 100.0 35 ..................................... AAAGAATCGCGTATCCTACCGCAGGATAAGAGAAA 411648 37 100.0 34 ..................................... TGTCTTTGATCGCATAAATGTGTTCGATGAATGC 411577 37 100.0 35 ..................................... AGTGGTTTTAGCGAGTCCGACAATGACCTCCGGGA 411505 37 100.0 38 ..................................... GATGATCAATTTAGGCTAATACTGCCAGCTCCTTTTGA 411430 37 100.0 38 ..................................... GCCCAATTGAGAGATGGCGACACGATTAAACTTCGATT 411355 37 100.0 33 ..................................... GCCCAATTGAGAGATGGCGACACGATTAAACTT 411285 37 100.0 34 ..................................... AAAGCTCCTACTGCTCGCGCTTCTTTCGCATCAG 411214 37 100.0 34 ..................................... GGTAAAACCTATCGCTTACCGACAATAGACGAAT 411143 37 100.0 35 ..................................... TTAGGTAGTCGATTTGCAATTAATCTCCGAACTAC 411071 37 100.0 37 ..................................... AGGCTGTATTTCGTACCTATCACAGATCGCCTGTAAA 410997 37 100.0 35 ..................................... CGCCAATCAAGATGCCCCTATAAAAGTTGTGTCAG 410925 37 100.0 34 ..................................... GACTTCCCCCCTTGCCTCTAGCCATGCCGCGATC 410854 37 100.0 34 ..................................... AGTAACAGAAAAAATATTAACTTTTTGCAAGGCA 410783 37 81.1 128 ..........................TA.CGGT..G. GCTTGAGTGAGATACAAACCAAGCTTTGCCTAGCATGGTTTATAGCTCGTGAAACTGTACCTCATACGACTGCACACCGCTATAGGGATTGAAACTATAAATTTATTCAGCAAACAGGCATCGCGATG 410618 37 100.0 35 ..................................... ATTGTCTCTATCGTCAGGGTTTATCGCCAATTCAA 410546 37 100.0 36 ..................................... CACAACAAAAAGCACCGCAAAGACACCAGTACAATT 410473 37 100.0 36 ..................................... TTTAAGCCGACCATCGGGAACACACCGACGATTAAG 410400 37 100.0 35 ..................................... TTGTAAAAATAATCTTCCATGATTATCAAAGTTCC 410328 37 100.0 38 ..................................... GATGAATACAGCGAAGGATGGGAAGGAATAAAAGGATG 410253 37 100.0 34 ..................................... ACTATAAAGGCTAAAAGCAGAAAAGAAGCATCAT 410182 37 100.0 34 ..................................... ACTATAAAGGCTAAAAGCAGAAAAGAAGCATCAT 410111 37 100.0 36 ..................................... TGTTAGTCTCGATTGCGTCGCTTTTGACCTGAAAAC 410038 37 100.0 41 ..................................... CAACTTGATGGAGTGAATAAAGGTTAGCTAAGTAGGTTCCA 409960 37 100.0 36 ..................................... TTGCGAAAAAACTGGATGGAAAAAACCAGAATATGA 409887 37 100.0 32 ..................................... TTCATCAAAACAAAAAGCGATTTCCCGTCCCC 409818 37 100.0 34 ..................................... AACGGTGGGGATTATAAAACAGTTAGGAAATACT 409747 37 100.0 34 ..................................... TCCTATGATGATAGCTATACCGCTCCGTTTGCCG 409676 37 100.0 33 ..................................... TAACCGTGGCACTCCCCAAGCCCACGCCGCCAA 409606 37 100.0 34 ..................................... CGATAAAGTTGAGGGTAGATCGAGCTGCAATTAT 409535 37 100.0 35 ..................................... TTGTATATAATACATTAATACTTATTAGTAAAAAG 409463 37 100.0 34 ..................................... ACAAAATTCAAAAAGAAATAGAGAAGATAGTATC 409392 37 100.0 34 ..................................... GGGCTTCCTTCAAATTCCGGCCTCGCTAATTCCC 409321 37 100.0 35 ..................................... GGGCTTCCTTCAAATTCCGGCCTCGCTAATTCCCG 409249 37 100.0 35 ..................................... TATTTGTCCCTCAGAAAATCTCCAATTAGAAGATG 409177 37 100.0 35 ..................................... CTCGATCGCATCCTTAGCGGAAAAGGATAGTGATC 409105 37 100.0 36 ..................................... TGCACAATATCCAATCTTTTTCGCTCCACTCATCAT 409032 37 100.0 41 ..................................... AAGTATTTCCCCGAAAATCCCTAATTTTCCCCAAAAATCAG 408954 37 100.0 34 ..................................... AAAATCGCTATCTCAGGATGATATAGCTAAAACT 408883 37 100.0 35 ..................................... GATCTACCTTTTAGCCCTGGGAGTAACAATTATGA 408811 37 100.0 34 ..................................... TTCATCACCTCCATCGGCAATGAACGGATTAGCG 408740 37 100.0 34 ..................................... AACCCTAAAAATCATAATAACACAAAAATCCCAA 408669 37 100.0 34 ..................................... AAGCATTCCCTATAATGCCATAAAATTAAGCGAT 408598 37 100.0 38 ..................................... CTTTACCACCATGCTAAAAGCTAAATATTGGCTCACTT 408523 37 100.0 44 ..................................... TTATTTTGGTCGGGAGGTGCGTCTCAGCGCGTGAGATGCACCTC 408442 37 100.0 36 ..................................... GGGAAGCGCTTCTCTCGCGAGGGAGAGGCGCTTGCC 408369 37 100.0 34 ..................................... TGATCAATCTTGAGATACCGCTCCCAATCAAATC 408298 37 100.0 34 ..................................... AGTTGAGAGTTAGAAAAGGGGCAATAGATAAAAG 408227 37 100.0 35 ..................................... AAGACCAGATTAAAGCAGTTATTAACAAATTAATC 408155 37 100.0 35 ..................................... TTTGCACTTAGTTGCTGATGGTGATAGATTGTTCC 408083 36 89.2 53 .............................-...C.GT CGTATGAGGTACAGTGTCACGAGCTATAAACCATGCTAGGCAAAGCTTGGTCT G,C,AT [408048,408053,408055] 407990 36 78.4 35 ......C.C..G.GCTT......-............. AAATATCTTAATTCCAGAAGCAACAAAGATAATGG G,T,A [407969,407986,407989] 407916 37 100.0 34 ..................................... TCGCTTTAATGCGGGGGGTACTTGGTCGAATGAT 407845 37 100.0 34 ..................................... TCACCCGGATTTGCCTGGTCTTATCAAGGCCGCT 407774 37 100.0 36 ..................................... TGCCAATCAAGATGCTCCTATAAAAGTTGTGTCAGT 407701 37 100.0 38 ..................................... GCGATCGCGCTTCATTGGTAAAATTTCAGTTTCACCAA 407626 37 100.0 34 ..................................... GCATTTCTCCAATTGGCATCGCCATCGGCAAAGA 407555 37 100.0 34 ..................................... CAGATTCTCCAAAGGGTGCGATCGGCTATTGCTT 407484 37 100.0 36 ..................................... TCCAGTGGATTCCTTCTTTATAGGGGGATTTTTTTG 407411 37 100.0 37 ..................................... AGGGGAAAGGGGTATTCAAGGTCCGCAGGGTATTCCG 407337 37 100.0 37 ..................................... AAGTAATTCTGGGAAAAATCCCATTTTTCCCGATATT 407263 37 100.0 35 ..................................... TTCAAATGAATGAATTGTTGACCGAAATTTTACAG 407191 37 100.0 38 ..................................... ATCAATTAATATCTAAAGAAACCCTTTTTTTAGATATT 407116 37 100.0 34 ..................................... CTAATTTGTGGTAAGCTATATCGCTTGTAGGACC 407045 37 100.0 35 ..................................... CTGAGTGGTGGCAACAATGGAAGCTTTGGGAAGGG 406973 37 100.0 35 ..................................... AGTTATCAGTTATCAGTTAATAATCTCCAACCAAA 406901 37 100.0 34 ..................................... TCAACCCTTAACAAAGCTTAAGCTTAATTGCTTT 406830 37 100.0 35 ..................................... CACGCCAAAAATGAAGCTCAAGCTATAAAATATTC 406758 37 100.0 36 ..................................... TAGGCTCTTTCCCATAAATAGCAGTAAATTTTTCGT 406685 37 100.0 34 ..................................... GAAAATTTACAGGTATTTCCCAGATCATTTCTTG 406614 37 100.0 34 ..................................... AACCGGTTACATTGGAAAGCTTAAAAGGAGGATT 406543 37 100.0 34 ..................................... CCCGATCCTTCCCCCGCACGCCCTCCCGCAACTG 406472 37 100.0 37 ..................................... TGATGATTCCTTCGGCTCGAATTTGGAATCGGCAAAG 406398 37 100.0 34 ..................................... TTCTGATTCGGGAAAAGTCGATAAAAAATACAAG 406327 37 100.0 34 ..................................... CAGAATCGCCTCTACATACTGCTGCAGTGGCTTT 406256 37 100.0 34 ..................................... AAGAAGCTGGCAGTATTAGCCTAAACTGATTGTC 406185 37 81.1 130 ..........................TA.CGGT..G. GCTTGAGTGAGATACAGACCAAGCTTTGCCTAGCATGGTTTATAGCTCGTGACACTGTACCTCATACGACTGCACACCGCTATAGGGATTGAAACTTTAATTTCATCGTATAACTCAGACTCAATTTTTT 406018 37 100.0 34 ..................................... CAAAATCAAATAGGTCCAGGATCACCCCACTGGC 405947 37 100.0 35 ..................................... AACGGACATAACCGATTAGATTTGGCTAAAAAACT 405875 37 100.0 34 ..................................... GGGGGTAAACCTAACTACTCCACAACTTCAAATA 405804 37 100.0 35 ..................................... AAAGCTTCAGCCCTGACAGAAAAAGGGATAGTGCG 405732 37 100.0 34 ..................................... CATTTTGTGCATTTTCCCGTTCTTTTAATTGAGT 405661 37 100.0 36 ..................................... AATGAATTATTATCAAGGATTGAAGCCTTAGAAAAT 405588 37 100.0 36 ..................................... AATGAATTATTATCAAGGATTGAAGCCTTAGAAAAT 405515 36 94.6 0 ................................-.G.. | ========== ====== ====== ====== ===================================== ================================================================================================================================== ================== 118 37 99.3 37 GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Left flank : TTTTGTTATCAGTTACGATATTTCCGACGATAAGCGACGAACCAAAATTCACAATACGTTAAAGTCCTACGGCCAACGGGTGCAGTATAGTGTTTTTGAGTGCGATCTAACCGATACCCAGTACGCCAAGCTGCGCGGGCGCTTGAGTAAGTTGATCAAACCCGATACCGATAGCATCCGCTTTTATTTTCTCTGCGCCTGTTGTCGGGGTAAAGTGGAACGTATCGGTGGTGAGTTACCCCGGGATAATACGATTTTTTTTGTTTAGCTCGGTTGCGCCTCGGAGTAGCTGTAAAAATCCTTAACTATTATCTGGTGGCTGGAAAGCTTATGCAATATAGATTCGAGATGATTTTCCTTTCCAACGCGGGGCGCACCTTATCCCGTAAGGTTTTGCGGGGTCTTGAAGAACTGGGTCACTTGCTGTACAATAGATTTATTGCGGGTGCGGCGCATACGAACCTTGAAAACCCCATAGCGTATAGCTTTTACCACTGGGC # Right flank : CTCTTGCATAATTTTTTTATGGTATAATATAAGGTTTTGCTTTTTTCTCAATTCTTAGATTGAAGTGGAAAAAAGAATAAAATGTGATCTTAGGTCAGGAAATCATCTATAATTTTGCTATGTTTATTAGCAAAATTATGGATTATCAAAACTTATCAGATGAACAATTCAAACGCCGTTTCGGTGTGTATAAACAAACATATAGAAAGATGGTAGAATCAGTAAAAAGTGTTGAAGCCGACTCTAATTCAGCGTTCGGCTGAGCTCACGCCGAAGCCATCTAAAAGGGGACCGAAACCTAAACTATCTATAGAAGAACAAGTTTTAGTAACGTTAGAATATTGGCGAGAATATAGAACATATTTTCACATTGGTACAAGCTGGGAACTATCAGAATCAACTATATGTCGGATTGTAAATAAGACGGAAAAAATGCTTTTACAATCGGGAAACTTCCGTTTAAAAGGAAAAAAAGCTTTACTCAATCAAGCAGAGATACC # Questionable array : NO Score: 9.08 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [28-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA //