Array 1 960068-960890 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QVGE01000001.1 Klebsiella pneumoniae strain Kp_SE1_NDM_10_2017 utg000001c, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    960068	    29	 100.0	    32	.............................	ACCGGCTCGCGGAAAACGCGGATCAGGCTGGC 	
    960129	    29	 100.0	    32	.............................	TCATTCATAACAAAACCGCTTTTACTAGATGA 	
    960190	    29	 100.0	    32	.............................	TCAACGCGCTGGTGCAGGCAAAAAAACTACAG 	
    960251	    29	 100.0	    32	.............................	ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 	
    960312	    29	 100.0	    32	.............................	GCGCCGGAATCCAGACCGAGATCAACCGCGAC 	
    960373	    29	 100.0	    33	.............................	CGAGTCATTTCCCCGAGTCAAAAGCAGTAAAAA	
    960435	    29	 100.0	    32	.............................	CGCCGGGACGGGCAACCAATAGTCTGGCCTGA 	
    960496	    29	 100.0	    32	.............................	CGTGACGCGCGACGATATTTTAGCCGCGCATC 	
    960557	    29	 100.0	    32	.............................	TCCCTGGGTGCTCAGCGCCGGTATCCATGAAT 	
    960618	    29	 100.0	    32	.............................	AAATACTCGCGCAGGTGTTCAGGCTGCTCTCT 	
    960679	    29	 100.0	    32	.............................	AATTAAATACGGCAGAAACACTGGCCGCAGGA 	
    960740	    29	 100.0	    32	.............................	ACGGCCCGACAGAACGGCGCTGGAATCTCTCG 	
    960801	    29	 100.0	    32	.............................	ACTGATATCACCGAACTGGCTCGGGCCATGAA 	
    960862	    29	  75.9	     0	...........ATTC...A......G..C	|                                	
==========	======	======	======	=============================	=================================	==================
        14	    29	  98.3	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAATCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT
# Right flank :  CGTCCACTAACGTTATCGATCCTGAGGGTGGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//