Array 1 438001-437381 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHSPA010000002.1 Streptococcus equi subsp. zooepidemicus strain SEZ_19-052 tig00000004, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence           	Spacer_Sequence                          	Insertion/Deletion
==========	======	======	======	==========================	=========================================	==================
    438000	    26	 100.0	    41	..........................	GAGAGGTAGGCCGACAGTGCGCCATTTTTTACCAAGTCTCG	
    437933	    26	 100.0	    41	..........................	CTTTGATGCGACTATCTAAAATCTCAACAAAGTCGGTCTCG	
    437866	    26	 100.0	    39	..........................	CTGAAGCAATAGCTAACAATCCCGCTTTACAATGTCTCG  	
    437801	    26	 100.0	    40	..........................	TAAACTTGATGTTTCTAAACTGACTGATAAAGACGTCTCG 	
    437735	    26	 100.0	    39	..........................	CGCTTTTGCCTGCTCATTACGCTGGCGAATAGCGTCTCG  	
    437670	    26	 100.0	    41	..........................	ATCTGAAAACTAACTTTTTTGCCTCCTTGTGTCTTGTCTCG	
    437603	    26	 100.0	    41	..........................	GTTTGAATCAGAAACACGTGATACAAAGCTTGGACGTCTCG	
    437536	    26	  76.9	    40	..TTTC.T.......C..........	CTGAAATTGCCCCTGCTGAAAACATGAAATTAAGGTCTCG 	
    437470	    26	  80.8	    37	..TTTC.T..................	GCGATACGTGCCTTTACGATGTTGCGACTCCGTCTCG    	T [437446]
    437406	    26	  61.5	     0	...TT.GT...T.C....T.C.T.T.	|                                        	
==========	======	======	======	==========================	=========================================	==================
        10	    26	  91.9	    40	CCCCATACGGGCGAGTGGATTGAAAT	                                         	       

# Left flank :   TATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTGTGTGTTGATTATGGCCAGCGCGTGCAGCATTCGGTCTTCGAATGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACAGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACACTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGTGAGTGCGAGCCTGAGTCACTCATAAAATGCTAGGAGACTCGCGCTAAAATAAGCTAAAAAATAAAGAAATGGGAGGTTATAGCTAAATATGTTATTAGCTAGCCTGTGTCATTTCTCTATAAACTGTGCTATACTGCGCAGTCTCG
# Right flank :  CTTTGTTTTTCATGAAGGGGTAAATCATATTGTATTCATCAAGCTGATTTATGCTTTTTATGGTGCTATGTCAAATAGATAAAAACCAATCTGAGGTTGTTGCAACAGGATTGGTTTTTTCTTGTGATTGCAGATCAGACTTTTCAAAAGAACAAGCACATTATCTCAGCTAGACTGGTGCTTGATAGCTCCTGAGCCCTTGTTTGCTGTAGTTGATAGGACTTTGCTGATGGCCTAGTCAGGCATATCGTATCAAATTCAAGTTTTTTCATGTCACTGTCTATAGTTTGTCTGCCCTACTTTAGGTAGAATAGAGGTAACTTAAGAGAGGAGTTTATTATGGAATTAACGATGCTTTTGATGGTTTCAGTTTTCATTGCAGGGCTGTTATCATTCTTTTCCCCTTGTATCTTTCCAGTTCTGCCGGTGTATTTAGGCATTTTGTTAGATTCTGATGATTCTAGGTCTATTACTATTTTTGGCAAGAAACTATATTGGTA

# Questionable array : NO	 Score: 8.86
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCCCATACGGGCGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [7,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched CCCCATACGGGCGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.80,-6.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [22-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9.41   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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