Array 1 1421626-1417636 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGTF01000002.1 Porphyromonas macacae strain NCTC11632, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1421625 30 83.3 36 ....C.....G.G.A.T............. ATTCAGGCTACCTCCCTTGACTGCTATTGGAAGCAA A [1421608] 1421558 30 93.3 36 ............G.T............... CGGTTTCAGGTCAATGATGCCGGCACGAAATTTCGC 1421492 30 100.0 36 .............................. CAACTGTTACCATGCCTTGGTACTTGATTGCACCAA 1421426 30 100.0 35 .............................. TATATCGACCATGACGGTAAGGAGATTACGCAAAA 1421361 30 100.0 37 .............................. TGAAATTGTTGATTGCGTTTTCAGTCATACAAGTATT 1421294 30 100.0 36 .............................. CTTTAAAGGATTTCTTGTAAAATTTCAAGCAATTTA 1421228 30 100.0 36 .............................. TCTGAATAAGTGAAGAGAACTTACGATATGTACCAT 1421162 30 100.0 35 .............................. GGTAGCAGCGGGAGCTTTGCCCAAATAGGTAGCAG 1421097 30 100.0 35 .............................. ATAGAAAGGCAAGTACAATAGTTCCTGCATTTGCT 1421032 30 100.0 38 .............................. ACAGATGAGCAGACTCATTTCCGAGTTGTAGCAATCAA 1420964 30 100.0 37 .............................. ATTTTAGGGTGGTTGCAAAGCGCCCTATTCCTCGTGT 1420897 30 100.0 36 .............................. AAAAGTTAGCTTACCTGTGCCAGAGATACCAACAAG 1420831 30 100.0 36 .............................. TAGCGAGGCGTAAGTGTGCAAGTTAACACCTCAGGA 1420765 30 100.0 36 .............................. TTTAATGTTGATTTTATGGAACAAAAAAAATCGAAG 1420699 30 100.0 37 .............................. GAAGCCCAAAAACGGGGTCAATGTTAAAACTATCACC 1420632 30 100.0 36 .............................. GGTTGCCTGGAATGACGTGCAATTCAATATCCTCTT 1420566 30 100.0 37 .............................. TATAATTAAGATACGTTCGATAAGATATCGGATACAC 1420499 30 100.0 37 .............................. GGGCAAACCAAGCTGTAATGCGTAGTCTTTGTTATCT 1420432 30 100.0 36 .............................. ATTATATACATGTCGCACTTTAATATTTTGGTTTGA 1420366 30 100.0 37 .............................. GACAACAGGTCATCTTCCCACCTCAACACCCCTACTA 1420299 30 100.0 37 .............................. AAAGAGGCAGGTTAACAGCAGGGGGTAAAAGAAAATC 1420232 30 100.0 36 .............................. GATTTTACAACAACCACTTCCGGGAGTGTATGATAC 1420166 30 100.0 36 .............................. AGCACTAAGAGATGAGTCGTTTGATTACCAAATTTA 1420100 30 100.0 36 .............................. AATTGCGATGTCTACGAAGTGCAAAAAACCTGTTTT 1420034 30 100.0 36 .............................. AATTGCGATGTCTACGAAGTGCAAAAAACCTGTTTT 1419968 30 100.0 34 .............................. AAGTAGTAAAACTTATATTGGATTGTAAAACTTT 1419904 30 100.0 36 .............................. GATATCTGAAATTCGCATCAAAACTTGTCCATTCCC 1419838 30 100.0 36 .............................. GATATCTGAAATTCGCATCAAAACTTGTCCATTCCC 1419772 30 100.0 37 .............................. AAAATGAATTTCAGAGAAAAATTTCTGTCTGTATTAC 1419705 30 100.0 35 .............................. TAGGCTACAGGGCGATCCTGGTTCCTGTTCATCAA 1419640 30 100.0 37 .............................. AAGACAGGAAAAGAATCCATACGAGTTGGATAAAATT 1419573 30 100.0 36 .............................. CGTATTTGTACCAGAATGTTCTTTGATGAGAACTAT 1419507 30 100.0 36 .............................. CGTTGATAAACGCAAAAGCCGTGCTTGACGTTGAGG 1419441 30 100.0 34 .............................. CGTATACGCGAATTGAAAGATGAGCTTATCGATA 1419377 30 100.0 34 .............................. CTGTAACGCCCTGCGTCTCCGTGTCGCCTGCAAT 1419313 30 100.0 36 .............................. TGCGCAAGGCTGCAAACTATCCCCGATTGGTACAAG 1419247 30 100.0 35 .............................. TCTGGAACGCTGAGGAAAAGCGAGTGGAGAAGATT 1419182 30 100.0 36 .............................. GTTTCATTATCTCCCCTCTGCCTGTTAGCAACCATT 1419116 30 100.0 37 .............................. CAGAGAACGACATACCGCCCTGTATATCCCGTTTTTC 1419049 30 100.0 37 .............................. GTATTGGCTAATATACCCGCTAATTATCCCGAATCAT 1418982 30 100.0 34 .............................. TCTTGTAGAATACCCCTCCCTTGTTCTCTCCTCT 1418918 30 100.0 36 .............................. AGGCCTATACGTATGCGAATTAGCTATGCGGGTAAT 1418852 30 100.0 37 .............................. AACAAGAATTGTGTTGTGTAATACACGAAGCAATTGT 1418785 30 100.0 37 .............................. ATCCTACTAATTTTACAGTAGGATTAATTGGTGCTGG 1418718 30 100.0 37 .............................. AAGAGGGTGATATTATTCTTAATTTAATTTATTCTGA 1418651 30 100.0 35 .............................. TGTCCGCAGAGAGGACTGCTCAAATTGCAAACCTC 1418586 30 100.0 36 .............................. TCCAAATAATTATGCCGTTCGCCGTTATATCTATTA 1418520 30 100.0 35 .............................. AAAGACGATGGCACGTATGAACGAGATGCTCGACA 1418455 30 100.0 37 .............................. GAATATCAAGGCAAGCCTTGTTGCAGAGGGCAAAATC 1418388 30 100.0 35 .............................. CTTATAAGCGAGTGTGGAGATTGCTACGAAGTAGG 1418323 30 100.0 35 .............................. ATAAATATTGACATGTATATAAATGATGTCAAATT 1418258 30 100.0 36 .............................. ATCGAATAGTACCGCATAGAAACTTTCATTTTCAAA 1418192 30 100.0 36 .............................. AACGCGTCACGAAGCAGACCCTTAATGCTGTCGACA 1418126 30 100.0 35 .............................. AATATTATTTTTACAAGTACTTATGCTATTGCAGG 1418061 30 100.0 37 .............................. GGTCACACGTGAAATTTATATCGGAGAAATTAACATC 1417994 30 100.0 36 .............................. AAGAAGTTTATCCCAAACATGTTCGGCATATTCCTT 1417928 30 100.0 35 .............................. GTTCAAACCCCCCAGATGGGTGATGCTCCTCTGGT 1417863 30 100.0 37 .............................. TTAAAGCTCGGGTTGCCGAGGATGGACATACTATCAT 1417796 30 100.0 35 .............................. ACGCGAGGTACGCGTTATTTCAATATCGCAACTAT 1417731 30 100.0 36 .............................. GCTAAATCCTCAAACATGGGATGTCTCATCCCGCTC 1417665 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 61 30 99.6 36 GTTTTAATTCCAATCTGGTACAATTGAAAG # Left flank : GTTGTCTTTATATTTATCTAAAAACTCTTCTGCACTTGAGAAAGCGATCTGATTGATGTAGCGTTCGACTTCATCCTCCGTCATACCGATACCCTCGTCGCTCACCGTAATGGTCTTTGCTTTCGGGTCGAAGCTCACAGAGACTTTCGGAGTGCCGATATCTCCTTTTACTTCGCCTCTGGTTGCCATGGTTTTAAGTTTTTGCGTGGCATCTACGGCATTGGATATAAGCTCACGAAGGAAAATATCATGATCGCTGTAAAGAAACTTCTTGATAATAGGGAATATGTTTTCACTTGAAACCCCGATGTTACCTTGTTTACTCATTGTTTTTGAAAATATTTTAGTTGTTTTTGAAATCTTTTATTACAAACAAAGTGCCACACATGCAAGAGTAAATCTTCAACTGACATTCTGACCGATTAATATCCCAATTAAGCCTAAAAGACAGTTGATACAATTTAAAAAGTTATTCTAATGTCTATATTCACAGCCATCCG # Right flank : CCGCTAAAAACATACTCGAAATTTACGAAAACAAAGGCTTTTCACCAATTATTTGATGATTTTTTTCGTTCTTCAAGTTGTCGATCTCTAATCCTATAAAAAGACTTAGGTTACGACAACATATCTATTACATTGATTATAAAGCATTTCAAAGATCGCCAACATATTTTTATCTTCTTTTAATTATGAAATTGCAGAGATCGACAATAAAGAAGCTAAGCTTTATTCACAAAAACACTGAAGTTGAAGCTCTTTCTCGTCCAATAATTTCTTTCTCTAACCAACGTTCTTGTCTGGAGGAAAATATAATCAGGCTATCTACATCATTATCCATAAAATCTTTTGCCAAGGATTTTAATTCTAACAGTTTCACCTCAGACAGTTCCCCTTCAAAAACGGAATTTTGAATCCAATTAAGATATTTTCTACACAATTTAAGCATTTTTGCCACACGCTTTTCACCAACATCATAAACTAAAATAACATACATTACCAATACA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATTCCAATCTGGTACAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA //