Array 1 28926-28239 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NFER01000044.1 Bacillus thuringiensis serovar aizawai strain T07128 T07128_contig000044, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
     28925	    32	 100.0	    34	................................	TATTGTTACACCTTTAGAGTATCCGAGTAAAAAA 	
     28859	    32	 100.0	    34	................................	TGGGTGGCAATGTTTGCGTTATTAGTTCCGAGTG 	
     28793	    32	 100.0	    35	................................	ACAATGGGAAAGTGTTAGGTTATGCACGTTTTAAA	
     28726	    32	  96.9	    32	.......................A........	GAAGATAGTAGAAGAAATCAAAAAAAGTGTAT   	
     28662	    32	  90.6	    33	.........T.........T...A........	TTTGTTGCTCCAGTCGTTATGATCGTCTTTGCA  	
     28597	    32	  93.8	    33	.......T.T......................	TAGGAGTTATTAATGGCTTTAGATGTTAGACCA  	
     28532	    32	  90.6	    34	.........T.........T.A..........	TACCTCGGGTTTATATTTATCTGGAATGCCCATA 	
     28466	    32	  93.8	    33	........CT......................	TTTGCAACTAGCTCAATTGTTTTTCCGTTTTCA  	
     28401	    32	  96.9	    34	....................A...........	TACCTCGGGTTTATATTTATCTGGAACGCTCATA 	
     28335	    32	  90.6	    33	.........T.A.......T............	ATAATATCACAATTTTGACAAAATTCAGTCATG  	
     28270	    32	  90.6	     0	A.T.................T...........	|                                  	
==========	======	======	======	================================	===================================	==================
        11	    32	  94.9	    34	GTCGCACCTCATATAGGTGCGTGGATTGAAAT	                                   	       

# Left flank :   ATTGAAAATGGAGAAACAGAGAATTTATATCCAGGGATTAATAAACAAGGAATAAGAACATTTTACACGAAACATTCTACAGATGTTGAGAATGAGGTTGCTACTGCGATTCATGTGTACGTTGATGTATTAAAACAAATGAAGCGTGAAGGTGCTGAATTAGCAAGGAAGAAGTAGAACGATGTGATTAGAAGATTTAATAAATAAAATTCTTCATCATATTATAAAACTATACATTCTTGTTTATTAGTTAGCTAATAGCTATGAAAATAAAATTAAATATATCGGTGTACAAGAATGAATTGATTTAGAAAGTCCTTTGATTTTTTAGGTGCGAATGTATAGCAAACATGAAATTCCTAGTACATTCGCACCTAGAATTCTCATAATGTATGATGGGGATTTATGATTTTTATACAAAATACTTTAATAAATAAAAATATTTTTATATTTTTGAATAGAATTAACGTATTTGTGATTGATTTTGAGCACAAATCGGT
# Right flank :  AGTTTAGTAGATACTCAACTAGAAGTATCTATATCTGCAGTATCTAATACAAAAGTAAACAGTATAAAATGGAGGGAGATTGAATGACCTACATTGCTCATATACGCGAGAGTGACAGTCAAGTACAAACAGTCGAAGAGCATTTATTAAGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATTGGTATAAAACATTTAGCTGGTTTAGCCGGTATGCTCCATGATATGGGGAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTAATTCTCCACCTAAAAAGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATGATTCCTTACAAAGGGATAATATCTGAGATAGTGGGAAATGCTATTATTTCTCACCACGGATACCTTCAAGATTTTTTAAATCCAGATTTAGAATCGCCCTATTTAAATAGAGTGCGAGATAAGCAATTA

# Questionable array : NO	 Score: 8.46
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCTCATATAGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         R [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.50,-2.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [9-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9.41   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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