Array 1 816231-818732 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAKO010000004.1 Deinococcus wulumuqiensis R12 scaffold_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 816231 37 100.0 30 ..................................... ATTCATATCTNNNNNNNNNNAAACGGCACG 816298 37 100.0 35 ..................................... CCGAAGGCGCCCCGAAGATCATGTTCGTCTGGAAG 816370 37 100.0 36 ..................................... AGTGTCTGGACACCGAGCGCGGCACGGTGCGCGGCA 816443 37 100.0 36 ..................................... GTGTAGATGACCCACTCATCGCCGTTGGGCAGCACC 816516 37 100.0 33 ..................................... AGTCAATCGGCGTCTGGTCGAAGGCCAGAGCGG 816586 37 100.0 35 ..................................... TCTGCCATGTACGCGGCGTAACCGGGCGTGGCGGG 816658 37 100.0 37 ..................................... GAGGAACTGACGGGGCGGTTCGTGTGGGCGTCCCTGC 816732 37 100.0 38 ..................................... TGCCGCTGCCGGAAAAACCCCGGCCTGAGCCTCAGCCG 816807 37 100.0 36 ..................................... TGGTCCATATGGACACGGCCATCAACAGCGGGCCGG 816880 37 100.0 37 ..................................... AGTTCGGGGCTGAGTAGGGCCTGGGCTTTTGCTTCGA 816954 37 100.0 43 ..................................... CATGCCCTGGAGTCAGGCCTTCGTGCTGGCCCTGATCGCGTTC 817034 37 100.0 29 ..................................... GTGATTCGCGNNNNNNNNNNCTTGAACGC 817100 37 100.0 35 ..................................... GGCACCAGTCGCTGATTTCTCGCTGGGAAGCAGAC 817172 37 100.0 35 ..................................... AGCCACGTCATCTTCTGGTGGCAGAAATCGGCAGA 817244 37 100.0 37 ..................................... GACTGACGCCGTAAACGTAGCCGGAATTGAGGGAGCC 817318 37 100.0 34 ..................................... GCTCAGGGCACGGTCATTCAGGGCAACGTGCCCG 817389 37 100.0 35 ..................................... AGCGCAGCACGCACGGCACGGTGCTGCTCACGCTC 817461 37 100.0 36 ..................................... CGCCATCATCGGGCCTATGGGAGTGACCACATGGCT 817534 37 100.0 34 ..................................... CCGAGTGAGCAGGTGCGCGAACTTGGGGCGTACC 817605 37 100.0 34 ..................................... CCCGCTCGGCCAGCGCCACAGCCTGGGCGTGTAG 817676 37 100.0 34 ..................................... CTGTTGCTGGCGGTGGGACTGCTGCCCTGCCCAA 817747 37 100.0 35 ..................................... TCCGCGACGGCGCGACGTGGCAGGAAGTCACCAGC 817819 37 100.0 35 ..................................... GCTCAAAAAGTGGGGCGACGAGACGCTAGACCTCT 817891 37 100.0 37 ..................................... AGTTGGACGAGATCCTCCAGGCGAACGAAAGCCTGAA 817965 37 100.0 37 ..................................... AGACGCTGCACGTCACCAAAGACGGCGCAACCCTCGA 818039 37 100.0 35 ..................................... TACCTGCTGTTCCAGGGCAACGCGAACGCCGCCAA 818111 37 100.0 34 ..................................... CCCGCGACGGCGAGTACATCGACGGCGGCGACAA 818182 37 100.0 35 ..................................... TGCGGCGTGCCATAGCTGTCGCGCTGGGTCAGCCA 818254 37 100.0 36 ..................................... GTCAGCGCAGGCTTGTTCATCTCGGCTTCGAGGTCG 818327 37 100.0 35 ..................................... CTCACGCCGAGCCATGTGCGGAGCCTCGCCCGGAA 818399 37 100.0 44 ..................................... CGGCAGAGGAGAGGGGCGGCAAGCGCAGGCCAAAGGCCGGGAAC 818480 37 97.3 35 .........G........................... GGTAGGGGAGAGGGCGCTTCGGGCATCGGGACGAA 818552 37 97.3 37 .........G........................... AGGAAACAGGGCTTGCGCTGCCTTCATCGCTTCGAAT 818626 37 97.3 33 ...........................C......... AGACAGCAGCGGCAGCAGCGAACTCCGGCGAGC 818696 37 94.6 0 ........A.G.......................... | ========== ====== ====== ====== ===================================== ============================================ ================== 35 37 99.6 36 GCCACATCGAAGAAGCCCAGCGTTAGGGCACTGAAAC # Left flank : CCCTGCTCGTTGAGGCCGAACTGGGGCTGACTTGCCCCTATGGGTACTGGCACTCGAGCCGCACCCGGCAAACCCATACCGTCCCCATAGATACCCGATTGCGAAGGCGTACCCTTCAAGCGATTGCCGAAGTGCGCGCTTTCATTGAGCTTGAGCGGTGCCCGCCTCCCACCTCAAAAACGGTAAAATGCTTGGAATGCGAACTGAGGAACTTCTGCGGAGATACGCTGTGACCCGTTCGCAAAAGCTGAGGCTGCACGCAGAGCCGCCTGATTTGCGAAGCGTTGTCACGGCAATTTTGCCGCTTTTCGGTGATGAGCAACCCAGAGATCCGCTCCTCATGGAAAATAAGAGTGTGTCAGACACACCGCAAATGGCCCTATCCAACGTCTCTCCTGTCATTTGCGACCAACATGGACAGGCTATACTTTTGCCGTGATGGAGGCATCACGCGCTACATGACAGCCCAAATGAATTTGAGAAAACGCGTGAAATAAGCG # Right flank : CACGAAGATCAAGAACCTGCGCCGGCCGCTGGCTCGTGGCTGGGCCGCTAGACCAAGGATTCGCTTACCCAGAATCGACCTGTCAACACGGAAAACAGCCAAGGCTTTTGTGCCACAGTTGTGCCACAGTTTTTCTGGAAAGCCTTGGAAAAAGCCGGAAAAAGCCAGACGCCTCACACGCAAAAACCCTCTCCCAGTGGGCGTTTTTGGAACATCACGGAAAATGCCGGAAAACCCGGATGAGTATTCGTAATCAGTAGGTCGTCGGTTCAAGTCCAACCCTCAGCTCCAAGAAAAAGCCCCGCCTAGCGCGGGGTTTTTGCTTTAGTGGTTTGCAGTAGGTGCGCCACCAAACGGGTTGTGCCACAGCTCAGTAGGTGACAACTTCGTCTCCAGCCGCGCCTGGCGGGCAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCACATCGAAGAAGCCCAGCGTTAGGGCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.00,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 3780-47 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAKO010000024.1 Deinococcus wulumuqiensis R12 69, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 3779 37 100.0 33 ..................................... AGCCAGGACTACCGCCACACTGCCCGTGCCATC 3709 37 100.0 34 ..................................... GTTTCATGGTCTGGCTCCTACGACGATGAGCGAG 3638 37 100.0 35 ..................................... TTGTTGCGCTCAATCCAGCCATACCCGCAGATGTC 3566 37 100.0 35 ..................................... TCGCGCATCTCGGAGCGCAACCTTGCGCGGGCGTG 3494 37 100.0 34 ..................................... TGGGGTTGCTGGAACTACAGGCACCCTGAACCCG 3423 37 100.0 36 ..................................... ACGTAAAACGTCACGGTGAAACAAGCCCGCCGCTTG 3350 37 100.0 32 ..................................... GATTACCGCCGCACACAAGGTGCCCTGAGCAG 3281 37 100.0 35 ..................................... TTCGGTATCATGAAGCCATGACCGGAGACATCGTG 3209 37 100.0 34 ..................................... CCCGCTCGCAAGGGTGAAGAGCTGGTCTACCGGC 3138 37 100.0 33 ..................................... AACTTTTCCGAACTGGGTCAGGACATACACTCG 3068 37 100.0 32 ..................................... TCGCCCCAGTGGAACGAGCCGCTGGAGACGAC 2999 37 100.0 34 ..................................... ATACCGGGCCACGCTGATAAGCGCGTCGCCCGCG 2928 37 100.0 35 ..................................... ACCTCGCTTCCGGCTACGCCGCCGCGCATTTCACC 2856 37 100.0 34 ..................................... CCCCCGTCACCCTGCACCTGAGCATCGACGGCGC 2785 37 100.0 34 ..................................... ACGATTAACAAGATGAACGGCGTGGCGCTGAGCA 2714 37 100.0 35 ..................................... GCCGCGTGGTTGTGGGTGCTGCGGTTCGTGCTTGT 2642 37 100.0 32 ..................................... TCAAGATTTGACGGGGACAGACCGTGAATCCC 2573 37 100.0 33 ..................................... CTCCTGGTGGCTCAGGCAGCGGCGCAGGCCGGG 2503 37 100.0 33 ..................................... AACGTCAAAACACTCGCCGACGCCTGCGCCTGC 2433 37 100.0 34 ..................................... TCCGGTACGCAGACCATGCTGCTCATCACCTTGC 2362 37 100.0 34 ..................................... TCGCGGTCCTCGGTCTGCCGCTGCGTCACGGCGT 2291 37 100.0 35 ..................................... GCTCCCCCCAACACGCATCGGGGGTACCCCTCACC 2219 37 100.0 35 ..................................... ACGCTAAATCTGGCAGGCAACCCGGCCTACTTCGT 2147 37 100.0 33 ..................................... CGCAGCCAATCCACGTCCTGCATGGTGGCAGGG 2077 37 100.0 34 ..................................... CCGATTGGCCGGTTCGCACCAGGTGGATGTTGTT 2006 37 100.0 36 ..................................... ACCGGGACGCCTACCGATAAGCATGACGACCAAGTG 1933 37 100.0 33 ..................................... TGTAGATGAGGCGTTGCAGTCCATGCTTGACGA 1863 37 100.0 35 ..................................... ATCCGGTCAAGCTGAATCGCGTGGTCTGGGTAGAG 1791 37 100.0 35 ..................................... CTGCGGGCATCGCCAAACAAGCCCGGCAACGCAAA 1719 37 100.0 34 ..................................... CTCCGACAGTGACTCATCCTCCGAACGGTAGGAC 1648 37 100.0 34 ..................................... CAGAACGGGTCTAGAGCCACCTCGCGCACCGCGT 1577 37 100.0 33 ..................................... TCCTGAAGGACAACGGGCGCGGCAGGCAGCGGG 1507 37 100.0 35 ..................................... ACCGACGAAAACGGCAACCCCGTGGAAGCCGTGAG 1435 37 100.0 35 ..................................... AGTGCTGCTCAGTGCCTCGGCGCGGGCCTGCTCAG 1363 37 100.0 34 ..................................... ATACCGCACGCGCTCCGGCACACGCTGGGCGAGG 1292 37 100.0 34 ..................................... CTCTCCGATGAGGGCGGTTGGGATACCCCGTTCC 1221 37 100.0 33 ..................................... AACTCAAGGGCGTGAACGGCATGAACCAGACGA 1151 37 100.0 32 ..................................... AGCGCGTCGGTGTCGCTGACCTCAGTGCCGGG 1082 37 100.0 34 ..................................... AGCATTAGTCATCCATTGACCCTAAGAGCATGGA 1011 37 100.0 34 ..................................... AGCGGGGAGTGGCCTGAGTTCGTCGGGGTCAAAG 940 37 100.0 34 ..................................... AGGCGGCCTTGCCGACGACTGCCGCCATCAGCCG 869 37 100.0 34 ..................................... TTCCAGGAGCCGCACCGCCTCTTGGTCCAGCGCG 798 36 81.1 33 ...........................C.-C..CGCT GGCCGGTGGCGCCCGAGATGTTCCGCCAGCGCG 729 37 100.0 34 ..................................... GGCTCTGGAACCTCGGTGCAGGCGTCCTACTCGG 658 37 100.0 34 ..................................... ACACGCGCATGGAAAACGCTACAGAGGCGGAACC 587 37 100.0 34 ..................................... TTCTCGCGCCGCCGCTCAAGCTCCATGGCGGCTC 516 37 100.0 35 ..................................... CGGCCCGGAGGCGCGGCCACCGAACGTCTTGAGCG 444 37 100.0 37 ..................................... TTCGCGCTGGTGGTCGCGTGCGCGGTCAACTGCTGCA 370 37 100.0 35 ..................................... TCCTGCATCTTGGCGCGGGTCTCGGCAACCATCGC 298 37 100.0 35 ..................................... TGCCGGGGGCAGGTAGGGGCCGACCAGCTCAGCCG 226 37 100.0 34 ..................................... CGGGCGAGTGCCTAGCGGCGAGCGCCTTCCCTGC 155 37 100.0 35 ..................................... TCCTGGCACGCCCGAAAAGCTACCCTTCCTCTTTC 83 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 53 37 99.6 34 GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Left flank : CAGGGCCCACTATCCGCCGTACCTCCACCGATGATTGACTTACTGGTCTGCTACGACGTGAAAACCGAAACCGAGGCCGGACGCCGCCGCCTGCGCCGGGTCGCCAAAATCTGCGTGGCGCACGGGCAGCGCGTTCAGAACAGCGTCTTCGAGGTCGGCGTCACCGACGTTCAACTGCTCCAGCTGCGCGAGAAGCTACTGAACGCTATGGACGTGACCGAGGACAGCATCCGCATCTACCGCCTGCGTCAGCCCCGCGAAAAATTCGTGGAGGCGCACGGCGTGGATAAGTACATGGATTTCAGCGAACCCCTGATTCTGTAGCGCGAACCTGGTGCGACGGAAAAGACCGGGAGGTTTCGCGCCGCCTAAAAAGTCCGTACAGGACGAGCCGCATGACAAATAGATATTTCCGATACGTCCCCCTTTCTGGACTTCGGCGCAGGGTTCGCGCAAACTGATGTCGGGAAGTCGTCTGGCACGTATTTAGACGATGAACT # Right flank : CATAGTTGACTAACCTCATAGTCTGCCCGCTGGGTGTTCCGCCCGGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-14.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA // Array 2 57475-54376 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAKO010000024.1 Deinococcus wulumuqiensis R12 69, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 57474 37 100.0 34 ..................................... CCGGCTGCCACGCCAGAACCACCAGATACCCGCC 57403 37 100.0 34 ..................................... ATAGCCTTCAGGCGTCAGCTTCTTCGCGCAGTCG 57332 37 100.0 36 ..................................... TGGTAAGCGACGCGCGCGCGATCTTCGCGGCGCAGG 57259 37 100.0 34 ..................................... CCTCAGTTGCCAGGGCCGTTAGGTCGCGCTGTAG 57188 37 100.0 35 ..................................... GACAGAGACCCCGTCCAGAGGACTCAGCGGGTCCG 57116 37 100.0 36 ..................................... ACTGTCGAGGCGAACGATTATGACGACGATCGCCGG 57043 37 100.0 34 ..................................... AGGGTCAGGGTGCGCTGGCCCTCGGCGTCGGCCA 56972 37 100.0 33 ..................................... ATCAGGTCAAGGTGCTCAGCCATGCGAGCCTCC 56902 37 100.0 33 ..................................... AAAGGCAGCCCCGAGCGCGTCCGCTTCGGCGGC 56832 37 100.0 34 ..................................... TCGCCGAGGCCTGCCTCGCGGTGGGCGACTATGC 56761 37 100.0 35 ..................................... TCTCTGATTCTGTTCTGAACTTGGATTTGGCCTCT 56689 37 100.0 34 ..................................... CATCGGGAGGAATGAACCCGCGGAGAGGTCGAGG 56618 37 100.0 37 ..................................... ACGATGTCGCGGGCAATGACCACCACAGCGTCACGGG 56544 37 97.3 34 .........................A........... ACGCCCTGGCTGGCCCGCATCGGCGCCCTGTTCG 56473 37 100.0 33 ..................................... ACCAATCCGATGCTGGCGGCCCTGGCACCGGCG 56403 37 100.0 33 ..................................... CCGACAGGCGACAGCGTGACGATGAACGCCGCC 56333 37 100.0 35 ..................................... AAATGGGGGCAGAATGACCAGGGGATTAGAACAGG 56261 37 100.0 35 ..................................... TAGCTACCGTAAAAACGCCCGCTGGCCGTGCCCTG 56189 37 100.0 33 ..................................... TCAGCTAGCCCGCGCAAGTGCCGCCCGCCTGGG 56119 37 100.0 34 ..................................... CCATGACGTTTGACCCGAGTGCCCTGCCCCCCAT 56048 37 100.0 34 ..................................... ACCGATACGGAGCTGTCCGCCGCTCTCCGTCGTG 55977 37 100.0 35 ..................................... CTGCATGATGCCCACGCTGAGGGTTGCCCTGTCCC 55905 37 100.0 32 ..................................... TTCCGAGAAGGGTTGCCACGTGTCGACCGCGC 55836 37 100.0 34 ..................................... CTCCGAGGGACGCATTCGCGTGCTTGTCACGAAA 55765 37 100.0 35 ..................................... TCAAGCGGATGCTTATCGGTCATGCGGGGAGTCTG 55693 37 100.0 35 ..................................... CCGCTATCCAGGGTAACGAGTCCCGTAACGGCACA 55621 37 100.0 36 ..................................... CTGAACACCGAAATCATGCCCGCCTGGGAGCGCGGG 55548 37 100.0 33 ..................................... AGCGCGGTCATGGGTGCCGCCTAAGACGCCCTG 55478 37 100.0 35 ..................................... TTGCGCTGCCCGTGCGCGGTGATAAGTGCCCCGAG 55406 37 100.0 34 ..................................... GCCGGGGGGTTGGCCGCCGGGTCAAAGACCGCGT 55335 37 100.0 34 ..................................... AAAACGTCGCTCTACGCCACCGCCACAGCGGTTG 55264 37 100.0 35 ..................................... CGTAACGCTCTCCGCGTGACACTGGAGACCGTCAG 55192 37 100.0 36 ..................................... TGAGCGACGACCAGACCACTCACGAGGTGACCCCAC 55119 37 100.0 33 ..................................... CTAGAGTTCCAGCGGCGGGGCGCTCCGCATCTG 55049 37 100.0 34 ..................................... TGCCGCCACGAGTCCGTGGGGAGCGCCGAGGACG 54978 37 100.0 33 ..................................... TGTAGATGAGGCGTTGCAGTCCATGCTTGACGA 54908 37 100.0 34 ..................................... CGGCCCCTAGAAGTCGCCATCGAGTACACGACGC 54837 37 100.0 33 ..................................... CTCGAACTGCCGCTCAGTCTCCATGCCGAGCAT 54767 37 100.0 34 ..................................... CCAACCTGACCAACGCTGTGAACGGCAACACCAA 54696 37 100.0 34 ..................................... CTCTCCCGAAATCGTGGCGGAGAGGGTGTCGTCA 54625 37 100.0 34 ..................................... GTCTCAAAACGTGTGTTTCGGCAGGGACACAACG 54554 37 100.0 34 ..................................... AAAGGGCGAGCCGTGATGATGCTTGAGCAGGTAT 54483 37 100.0 34 ..................................... CCTGCCCCCACGCCCTGTGATGCCCGCCAATTGG 54412 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 44 37 99.9 34 GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Left flank : TGGCGCGGGTCTCGGCAACCATCGCGTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAACTGCCGGGGGCAGGTAGGGGCCGACCAGCTCAGCCGGTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAACCGGGCGAGTGCCTAGCGGCGAGCGCCTTCCCTGCGTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAACTCCTGGCACGCCCGAAAAGCTACCCTTCCTCTTTCGTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAACATAGTTGACTAACCTCATAGTCTGCCCGCTGGGTGTTCCGCCCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCTCCAGCCCCAGCACGTCAGTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAACATTCGGCAAGCATACTGCC # Right flank : AATGCCGCCCGGTGCGACGGTGTTGAATCGCGATTTCACGGCTGATGGGCCGAACCAAAAATGGGCTACGGACGTCACCTATCTGCCGACCACGGAGGGGTGGCTCTAACCCGCGACTGCTATGGACTTGTTTTCTCGGAAGATTATCGGCTGGGCGCTGGATGAGCGTCTATATACGCCGCTGGTGAAATGGCTGTAGAGCGCCGTCAGCCTTCAGGAGGGCTCTCGCACCGCTCGGATAGGGGGAGCCAGTACACCAGTGAGGTCTACCGCCAAGCCTTGGAAAGGCTTGAAGCCGTGCAGAGTATGAGCGGCAAGGGGGAATGCTGGGATAACGCTGTTCAGGAAAGCTTTTTTGCAACTCTCAAGACTGAGCTTGCACTGCATGACCCCCAGTGGGGCCGTGCCCAGACGCGGAGCGAGGTTTTTGAGTGGATTGAGGTTTTCTACAACCGTAAGCGCCGCCACTCGGCGCTGGGCTACCTGTCACCGGTGGCCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-14.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : NA // Array 3 61431-57698 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAKO010000024.1 Deinococcus wulumuqiensis R12 69, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 61430 37 100.0 33 ..................................... AGCCAGGACTACCGCCACACTGCCCGTGCCATC 61360 37 100.0 34 ..................................... GTTTCATGGTCTGGCTCCTACGACGATGAGCGAG 61289 37 100.0 35 ..................................... TTGTTGCGCTCAATCCAGCCATACCCGCAGATGTC 61217 37 100.0 35 ..................................... TCGCGCATCTCGGAGCGCAACCTTGCGCGGGCGTG 61145 37 100.0 34 ..................................... TGGGGTTGCTGGAACTACAGGCACCCTGAACCCG 61074 37 100.0 36 ..................................... ACGTAAAACGTCACGGTGAAACAAGCCCGCCGCTTG 61001 37 100.0 32 ..................................... GATTACCGCCGCACACAAGGTGCCCTGAGCAG 60932 37 100.0 35 ..................................... TTCGGTATCATGAAGCCATGACCGGAGACATCGTG 60860 37 100.0 34 ..................................... CCCGCTCGCAAGGGTGAAGAGCTGGTCTACCGGC 60789 37 100.0 33 ..................................... AACTTTTCCGAACTGGGTCAGGACATACACTCG 60719 37 100.0 32 ..................................... TCGCCCCAGTGGAACGAGCCGCTGGAGACGAC 60650 37 100.0 34 ..................................... ATACCGGGCCACGCTGATAAGCGCGTCGCCCGCG 60579 37 100.0 35 ..................................... ACCTCGCTTCCGGCTACGCCGCCGCGCATTTCACC 60507 37 100.0 34 ..................................... CCCCCGTCACCCTGCACCTGAGCATCGACGGCGC 60436 37 100.0 34 ..................................... ACGATTAACAAGATGAACGGCGTGGCGCTGAGCA 60365 37 100.0 35 ..................................... GCCGCGTGGTTGTGGGTGCTGCGGTTCGTGCTTGT 60293 37 100.0 32 ..................................... TCAAGATTTGACGGGGACAGACCGTGAATCCC 60224 37 100.0 33 ..................................... CTCCTGGTGGCTCAGGCAGCGGCGCAGGCCGGG 60154 37 100.0 33 ..................................... AACGTCAAAACACTCGCCGACGCCTGCGCCTGC 60084 37 100.0 34 ..................................... TCCGGTACGCAGACCATGCTGCTCATCACCTTGC 60013 37 100.0 34 ..................................... TCGCGGTCCTCGGTCTGCCGCTGCGTCACGGCGT 59942 37 100.0 35 ..................................... GCTCCCCCCAACACGCATCGGGGGTACCCCTCACC 59870 37 100.0 35 ..................................... ACGCTAAATCTGGCAGGCAACCCGGCCTACTTCGT 59798 37 100.0 33 ..................................... CGCAGCCAATCCACGTCCTGCATGGTGGCAGGG 59728 37 100.0 34 ..................................... CCGATTGGCCGGTTCGCACCAGGTGGATGTTGTT 59657 37 100.0 36 ..................................... ACCGGGACGCCTACCGATAAGCATGACGACCAAGTG 59584 37 100.0 33 ..................................... TGTAGATGAGGCGTTGCAGTCCATGCTTGACGA 59514 37 100.0 35 ..................................... ATCCGGTCAAGCTGAATCGCGTGGTCTGGGTAGAG 59442 37 100.0 35 ..................................... CTGCGGGCATCGCCAAACAAGCCCGGCAACGCAAA 59370 37 100.0 34 ..................................... CTCCGACAGTGACTCATCCTCCGAACGGTAGGAC 59299 37 100.0 34 ..................................... CAGAACGGGTCTAGAGCCACCTCGCGCACCGCGT 59228 37 100.0 33 ..................................... TCCTGAAGGACAACGGGCGCGGCAGGCAGCGGG 59158 37 100.0 35 ..................................... ACCGACGAAAACGGCAACCCCGTGGAAGCCGTGAG 59086 37 100.0 35 ..................................... AGTGCTGCTCAGTGCCTCGGCGCGGGCCTGCTCAG 59014 37 100.0 34 ..................................... ATACCGCACGCGCTCCGGCACACGCTGGGCGAGG 58943 37 100.0 34 ..................................... CTCTCCGATGAGGGCGGTTGGGATACCCCGTTCC 58872 37 100.0 33 ..................................... AACTCAAGGGCGTGAACGGCATGAACCAGACGA 58802 37 100.0 32 ..................................... AGCGCGTCGGTGTCGCTGACCTCAGTGCCGGG 58733 37 100.0 34 ..................................... AGCATTAGTCATCCATTGACCCTAAGAGCATGGA 58662 37 100.0 34 ..................................... AGCGGGGAGTGGCCTGAGTTCGTCGGGGTCAAAG 58591 37 100.0 34 ..................................... AGGCGGCCTTGCCGACGACTGCCGCCATCAGCCG 58520 37 100.0 34 ..................................... TTCCAGGAGCCGCACCGCCTCTTGGTCCAGCGCG 58449 36 81.1 33 ...........................C.-C..CGCT GGCCGGTGGCGCCCGAGATGTTCCGCCAGCGCG 58380 37 100.0 34 ..................................... GGCTCTGGAACCTCGGTGCAGGCGTCCTACTCGG 58309 37 100.0 34 ..................................... ACACGCGCATGGAAAACGCTACAGAGGCGGAACC 58238 37 100.0 34 ..................................... TTCTCGCGCCGCCGCTCAAGCTCCATGGCGGCTC 58167 37 100.0 35 ..................................... CGGCCCGGAGGCGCGGCCACCGAACGTCTTGAGCG 58095 37 100.0 37 ..................................... TTCGCGCTGGTGGTCGCGTGCGCGGTCAACTGCTGCA 58021 37 100.0 35 ..................................... TCCTGCATCTTGGCGCGGGTCTCGGCAACCATCGC 57949 37 100.0 35 ..................................... TGCCGGGGGCAGGTAGGGGCCGACCAGCTCAGCCG 57877 37 100.0 34 ..................................... CGGGCGAGTGCCTAGCGGCGAGCGCCTTCCCTGC 57806 37 100.0 35 ..................................... TCCTGGCACGCCCGAAAAGCTACCCTTCCTCTTTC 57734 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 53 37 99.6 34 GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Left flank : CAGGGCCCACTATCCGCCGTACCTCCACCGATGATTGACTTACTGGTCTGCTACGACGTGAAAACCGAAACCGAGGCCGGACGCCGCCGCCTGCGCCGGGTCGCCAAAATCTGCGTGGCGCACGGGCAGCGCGTTCAGAACAGCGTCTTCGAGGTCGGCGTCACCGACGTTCAACTGCTCCAGCTGCGCGAGAAGCTACTGAACGCTATGGACGTGACCGAGGACAGCATCCGCATCTACCGCCTGCGTCAGCCCCGCGAAAAATTCGTGGAGGCGCACGGCGTGGATAAGTACATGGATTTCAGCGAACCCCTGATTCTGTAGCGCGAACCTGGTGCGACGGAAAAGACCGGGAGGTTTCGCGCCGCCTAAAAAGTCCGTACAGGACGAGCCGCATGACAAATAGATATTTCCGATACGTCCCCCTTTCTGGACTTCGGCGCAGGGTTCGCGCAAACTGATGTCGGGAAGTCGTCTGGCACGTATTTAGACGATGAACT # Right flank : ATAGTTGACTAACCTCATAGTCTGCCCGCTGGGTGTTCCGCCCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCTCCAGCCCCAGCACGTCAGTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAACATTCGGCAAGCATACTGCCGTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAACCCGGCTGCCACGCCAGAACCACCAGATACCCGCCGTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAACATAGCCTTCAGGCGTCAGCTTCTTCGCGCAGTCGGTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAACTGGTAAGCGACGCGCGCGCGATCTTCGCGGCGCAGGGTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAACCCTCAGTTGCCAGGGCCGTTAGGTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-14.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA //