Array 1 438-730 **** Predicted by CRISPRDetect 2.4 *** >NZ_QQAC01000036.1 Clostridium botulinum strain P81 Cbot_73_contig_41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 438 30 100.0 36 .............................. TCAAATTTGCTTCCATCAGCAGATACCCCCATTTCA 504 30 100.0 36 .............................. ATATATAGATTGCCTTATAACTATTTTTCAATGATA 570 30 100.0 36 .............................. GCAAATATTCCAAGAAGCAATCAGATTAGATTGCAC 636 30 100.0 35 .............................. ACTTATTTGTATGCCTTTATTTGGGATTGTAGATT 701 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 100.0 36 GATTAACCTTAACATGGGATGTATTTAAAT # Left flank : ACCAAAATATTGTCCAAAGTAGAAATGTGAGTTTTTACTTTGGATTTTTTTTATTTTAGAGGAATAAAATATAATATTGATTAGATATTTTAGATAATAAAACAATAGCAATAAAAACGGGATTAACAGAAGAAATAGATGCTCTTAGAAAAAAGAAGGTAATTAGTATTTTTTAGAAACACTTAGAATTTAATTATCTTAGTTTTTTTTCTGTACAATTCTATTAAAGTGTATAATTTAACTAGAATAGTAAATATTCTATTTTACCAGCCATAAATTTATATAAAATCCCTTAATCCATTGAAATTACTGGGCTAAGGTTGCCATTGAAAATTTTTATTGAAATTTCACAAACGGTTGGTAAAGTTTCCTTGAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTAAGAGAATGGCTATTTTACTGTGG # Right flank : TAGAGCATTAGATAGTATTTTTATTGCCTTGGGAGAAGGTTTAACCTTAAAACATCCTTATAGCTATAACTTAGTTTTGTAGCTATAAGGATGTTTTTTTACTCTTAATAATGTAACAAAATATGTTATACTTGAAAAAAACAAATTGTAATTTGCATGGGAGAATACAAAAATGAGCAAATTGACTAAATATATTGAAGATTTAAGAAAAAAGTATGGGGATGCAATAGTAACAAAAGAAAGTCATTATGATAATATGATGCTTTTAAAGGTACCTGAGCCATTGAGGGAATTTTATAAGGAATATGAAAGTTTAGAAATGCCTTTTGGAATTATTGACTCTATCGAAATCAGTATAAGATCTTCAGAAGCAGAACCCTTTAAAAGTGAAGGCTGGTTTTCATTTGGTACAGATAGATATTTTTCCTTCTGGCTATGTGCTTATAAGGTAGATAATTATGGTAATTCTATTACTTCATGGGATCACGATATAGATGATG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 4425-5304 **** Predicted by CRISPRDetect 2.4 *** >NZ_QQAC01000036.1 Clostridium botulinum strain P81 Cbot_73_contig_41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 4425 30 100.0 38 .............................. ACAGCAGTATGTGCCATCTGTAAAGATTTTCCCGAACC 4493 30 100.0 34 .............................. GAGATTTTAAAAAGCAAGCTAAAAAAGCAGGTTA 4557 30 100.0 34 .............................. GTCACAACAGCATTTACACGTCTTGGAGCAATAG 4621 30 100.0 35 .............................. TTAACTTCTGTTATAGAAGTAGAACTTTCATTTTC 4686 30 100.0 35 .............................. TCTATTGGAATAGCTCTATCTTCATTTAATCTTCT 4751 30 100.0 36 .............................. TTCTTATAAGCTTCACTAAAGTAACTAGGTTGTTTA 4817 30 100.0 35 .............................. TGTGTTTATAGAGTGCAATTATTAGGAAGATGTGT 4882 30 100.0 34 .............................. AAAAAAATAGATTTGTTAAAGAATTTTTTGTATA 4946 30 100.0 36 .............................. TCTGTTAACACATTTGTATAAAACTTTACAATATCT 5012 30 100.0 34 .............................. AGCCTACACATTCTAAGCCTATTCCAAAAATCCA 5076 30 100.0 36 .............................. GGTTTATTATTCTTACCAGGCACAATACCATATTCA 5142 30 100.0 37 .............................. AATCCATCCTTGCACTCTTGGCAAATATCTTCTCCAT 5209 30 100.0 35 .............................. AAGCCAGCATCTAAAGTATTACAGGCAATTTATAG 5274 30 90.0 0 .................T.....G.....G | G [5301] ========== ====== ====== ====== ============================== ====================================== ================== 14 30 99.3 35 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : GAAGGCAGAGAAGAAGGAGAAAAAATTAAGGCGCTAGAAATAGCAAAAAATTTACTAGATATCTTAGATAATAAAACAATAGCAATAAAAACTGGATTAACAGAAGAAGAAATAGATGCTCTTAGAAAAAAAGAAGTTAATTAGTGTTTTTTAAAAACATTTAAGATTTAGTTATCCTTGACAAAGTATCCCATTTAAAGAGTTATAATGATTTTTTTAATTGTTATAGCTCTTTATTTTTCTCCGAAAAATAAAGAGATTAAGCTCAAATTTACTTTAAGAATTGTAAAAATAAAGTAAGTTAGTATAATATTAAGCATTCTATTTTACCAGCCATAAATTTATATAAAATCCCTTAATCCATTGAAATTACAGCGCTAAAGTGACCTTTTAAAAATTTTCTGAAAATTTTATAAATGGCTGGGAAAGTTTCATTGAAACCTTGAAGTTTCAATGCCTTAATGGTATTATTGATTTTAGAGAATGAGGATTTTACTATG # Right flank : GAAAAGGGCATGCTAATAACTAATAGAATGGCTGCAATGATTGGTTCATTGCAAGAATAAATATTAAAATGTATTATTGAAATTGTTTATATATAATGGGGGAAAAAAATGACTGAAATACAAATGTGGAATGAATATATTAAAATTAATACTAATGCAAAAGAGTATCAATCATGGTCATTTGGTGGAAATACACCTGAAATGCCAAATTTGTTGGCTGAATTAGTATTAAAGGGGATTAAAACTGCAACTGCTAGTGCATATCCTTGTTATATTGCAGAAAATGCTCCATTACCACCAGTTGGAGGATATAATTTGATATTAAATACAAAAGGTGAGGCTATTTGTATCATAGAAACTACAAAAGTATATACAATACCATTTAACCAAGTTAAGGAGGATCATGCGTATAAAGAAGGTGAATTTGATCGTACACTTATATCTTGGAGAAAATGTCATTCTAAATTTTTTTCTATGGAATTAAAAGAGATTGGTCAAGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 3 94949-96749 **** Predicted by CRISPRDetect 2.4 *** >NZ_QQAC01000036.1 Clostridium botulinum strain P81 Cbot_73_contig_41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 94949 30 100.0 36 .............................. GCAAAAGAATTAACTAATGACATGTATATAATATTT 95015 30 100.0 36 .............................. GACTTTTTTTTATCCATAATGTATCCTCCTTTTCAT 95081 30 100.0 36 .............................. AGTAATGGTGGTAACGACCTTCTTTCTATAATTCTT 95147 30 100.0 35 .............................. AAATAAAGTTAGAATTGTATGGCATAAAGGTGGAG 95212 30 100.0 34 .............................. TGTGTTCAACGTTCTACAGCGACCAATATTCCAC 95276 30 100.0 35 .............................. AAAGGAAGACCTATTTATGAAGCACTGAGAAAAGA 95341 30 100.0 37 .............................. TCTAATTTTTTAGTTATAGCGTGATTATTTAAAGTAG 95408 30 100.0 36 .............................. GATAGAGGTTATGATGAAAATTATTTTAAGGCGTTA 95474 30 100.0 35 .............................. CCTATTATGTTATTAATGCCAACATTAGATTTAGC 95539 30 100.0 36 .............................. TAGATATAATCTTTAATAAATTCCTTAATTGTACTT 95605 30 100.0 35 .............................. GCAGATGCGATTATAACTCCAAAGGTTGTAAAAAG 95670 30 100.0 36 .............................. CAAAATCCAAGGCCTAGTAAAGTAGCAATAGGTAGA 95736 30 100.0 35 .............................. GAAGCACTTCCAGGCGATTTAGTATTTTGGGGTAA 95801 30 100.0 37 .............................. ACCTTTAAAAAATAAAGAGGTTGATTTTTTTATGCAA 95868 30 100.0 37 .............................. GTTATTTGATTAATAACAAGTATTGCTCCCAGTTCTT 95935 30 100.0 36 .............................. TTTTTGAGTTATCTATAAATTGTATAGAATTAATTA 96001 30 100.0 35 .............................. AGCACGACGGGGGATTAAGGGGGACCCGTTGGGAT 96066 30 100.0 36 .............................. TTGTTTTACTGGTTCTTATCAATCTACTACCATAAG 96132 30 100.0 34 .............................. AGAAAAAAATTAATTCAGAAGTAATTGAAAATGG 96196 30 100.0 34 .............................. TATAAAGATAAACTAGAAAGAGAAGATTTAATTC 96260 30 100.0 35 .............................. ATAATCAATATCAAACATGTTCTGTTTCGACCTCC 96325 30 100.0 36 .............................. AAACAGATTTCCAGAATTAATGATTGAAAATGGAAA 96391 30 93.3 35 ............T.............G... TAAAGTAAGAAATTATTTTATTTTGATGGAAAAAG 96456 30 100.0 36 .............................. CCCTTTCTGACAAGTACGTAATATTAAAATGGCATA 96522 30 100.0 36 .............................. GCCAATATATACATATTTAAACATGATATTATATAA 96588 30 100.0 36 .............................. CCAACTTGCTTTTTATATTCCTTAGCCTGTTCATTT 96654 30 96.7 36 .................A............ AGGGCAAAGTTAGGCAACATTACTATTAATGCTCAA 96720 30 90.0 0 .......................A....GC | ========== ====== ====== ====== ============================== ===================================== ================== 28 30 99.3 36 GATTAACATTAACATGGGATGTATTTAAAT # Left flank : TAGACAGTGCAGAAGATATATTTAATAAAGTTAATGATTATATTTTAGACGGAATGCCATGCGATAGAGTAAATGAAATTATAAATAGCAATGAAAATTGTGTGAAATGGACTAGAAGAATTTGTGTACATAAAGAAATTTGGGATAAAGAAAGTGGAGATGTAGAGTACTTTTATTTCCTAAGGAGTTTATGGATTAAAGCTTTTGTAAATGAAATAAATACTGAATTTGATTATTTAGAAGACAGTAAAGGGGTAAAATCTATAAGAAGAAAATAAAGATTTTTATAAAAATATACATTTGTAATTTAAGACAAGCTTTATTATTTTACCAGGCAATTATTTTAATGAAATCCTATTAAACCTAGATAAATACAAGGATTATATATAATAGAATAAGTTATTATCAATATTCTAAAATCACTTGGTAAAATTTTTATAATATGTTACTATTACTGTATTAGAGAGATTTTAATATTTTAAGAATGGCTTATTTTCATT # Right flank : CTCAAGCAAAGGAGTAAAGCCGTTATTAACAGATTTTTTTAGAGTATTTATTTTTAATAAGACATCCAAAAATATAAAAGAAATATTATAATTATAAAAAAGTATTAATGTCAAGATTTTTTTGGTTCTTCCGTATTTATCCGTATATTATGATATAATTAATATATTAATAAATTTAAGAGGTATACATCATGTGTAATTCATCAATAGATTTGCAAAATTTTTTTCCAGCTAATAAATTAAAAATTACTAATATATCAGAAGATACAAAAGTAATTACGATAAATTTAAAATCGCAAAGCAGTACTTGTATTTGTCCTAATTGCAATACAACATCTAACAAATATCATGGAACATATGTAAGAAAAGTTCAGGATTTACCTATATTAGGTAAGCGAGTATTATTAGAAATCAATTCATATGAATATAAATGTGCAAATAGTGATTGTTCTAATAAAACTATAGTTGAATCTTTTGATGGTTTTATTAGTTATTATAGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-0.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 4 108293-110834 **** Predicted by CRISPRDetect 2.4 *** >NZ_QQAC01000036.1 Clostridium botulinum strain P81 Cbot_73_contig_41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 108293 30 100.0 34 .............................. CAAGCAAATACAAGTAAAAGTGCATTAGATACAT 108357 30 100.0 34 .............................. ATTACAAAATTATTGCACAGAAATTAGATTATCT 108421 30 100.0 35 .............................. ACTTCTTTTGATTCTAATTCTTCACGTCCTGCATA 108486 30 100.0 36 .............................. GAAGTAATTAATTCAGTAGTTAACTGGGGAAGCGAT 108552 30 100.0 37 .............................. ATACATTTATTAACTATCCTTATAATGAAATCTAAAG 108619 30 100.0 36 .............................. TAGAATCCCTAATTGTGGAAAAATGAATCCAAATAC 108685 30 100.0 34 .............................. GCATTAGTATCTTTCTTACCTAATGTTTTTGTTA 108749 30 100.0 34 .............................. ATGTGCATCTACTAAAAAATAAGACATTCAGTAA 108813 30 100.0 36 .............................. CAAGGAAAATTATTGTGTTAAGGTAGATAGTAAGAT 108879 30 100.0 36 .............................. TCATATTGGAGGAATGACAAATATAATTAATAATTT 108945 30 100.0 35 .............................. GAGTTTGTAGCACTTGCTGATAGTGCTAATACATC 109010 30 100.0 36 .............................. TCAAATTTTACAATAAATTCCGGAGGTTTTTTAGAA 109076 30 100.0 36 .............................. TTTCTTCTTCGGATTCAAACCATCCATATTCCAATC 109142 30 100.0 35 .............................. TATTATTATAGTCTTCGATTGAATTAACCCTTAAA 109207 30 100.0 35 .............................. AATAATGGAGCAATTGGCTTAAATAGTTTAAGTTC 109272 30 100.0 35 .............................. ATCTAGCTGAATCCTCTTTAAGATTTCCACAAAGT 109337 30 100.0 36 .............................. CTGTCACTACCGACAAACAAAGCTTTACCGATATTC 109403 30 100.0 37 .............................. ACTACTACTAATATTTTTACTGTTCCAGGTGTTGGAG 109470 30 100.0 35 .............................. TTGTGGGGGATAGCGTTACAAGCAATGCCTAATTT 109535 30 100.0 35 .............................. TAAAAATTTACAGATGTTTCAGGTATAAACTTTCT 109600 30 100.0 34 .............................. TTTAAAAATTTTTGTAAGTTTAAAAGTCCATCAG 109664 30 100.0 35 .............................. AAAATAGATAATTTAACAATACATAAATGTTTTCC 109729 30 100.0 36 .............................. ATTTGTTTAAAACTACATCTAGTGTTAAAATAACTT 109795 30 100.0 36 .............................. AAGCAATACCATTTCCCATTAATCTGTAACCATTCG 109861 30 100.0 34 .............................. GTAACATCTACCACTACTTGATTATCAATATTTT 109925 30 100.0 35 .............................. TAAGCATATGAGTTAATAATGATTTTACTACATGT 109990 30 100.0 37 .............................. CAAATGAAAACATTTTTAGCAAATGAAACATTTAAAG 110057 30 100.0 35 .............................. GTCCAAGATTTCAAAGAAATAAAAGAGGATATATT 110122 30 100.0 35 .............................. CTGAAAACATATTTAAAAATTTAATACTATTATAC 110187 30 100.0 35 .............................. TCAAATAAAGCAAATGGTGAATTAATTAAAATTAC 110252 30 100.0 37 .............................. GAAACATATTTGTGTAAAATCACATAATCTTCATCTA 110319 30 100.0 36 .............................. CTTGATGCCGCATCTAAAGCTGAAAGTCCATATACT 110385 30 100.0 36 .............................. AGATGGGAAGACAAATAAGGTTACTAGTCTAACCGT 110451 30 100.0 34 .............................. ATATTTCAAAGAATATTAGAAAAGAAATTATTAG 110515 30 100.0 35 .............................. ATATTTTTTGCTATACACACATCTTTAATTACTTT 110580 30 100.0 34 .............................. CAAACTATAATCTCAAGTGTCTGCTTATTTGTAA 110644 30 100.0 35 .............................. TCGTAAGATTCTAAATTTTGCGAATCTGTATGCAC 110709 30 100.0 36 .............................. GATTTCAAAATCCTTATTATGCAATAGAAGGACAAT 110775 30 100.0 0 .............................. - Deletion [110805] 110805 30 70.0 0 C..A..A..G.GGG...A.A.......... | ========== ====== ====== ====== ============================== ===================================== ================== 40 30 99.2 34 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : GTTTTTGATGAGTAAAATTAGTAATTATAACTATGCTTTTGTTTTTTATGATGTAAATGAAAAACGTGTAAATAAAGTTTTTAAAGTATGTAAAAAATATCTATCACATTTTCAAAAATCTGTATTTAGAGGAGAAATGTCACCATCTAAATTAATAAGGTTTAAAAAAGATATAAATTTAGTTATAGATAAGAGTGAAGATTTTATATGCATAATAAAATTAATGAATGATAATGTGTTTGGAGAAGAGATATTAGGGGTAACATCAAATGCAACAGGAGAGGATTTGATAATATAAATTTAATTTATTAAATAATAATAGATTTTTACCAAGTGAATATTTTAATGAATTTATTTTAAATATAGATAAATACAAGGGTTTGGAGAGATTAAAGACGTTTTATGAAATATTTCAAAATCACTTGGTAAAATTTTTGTAATATGTTACGATTACTGTATTAGAGAGATTTTACTATTTTAAGAATGGCTTATTTTCAATG # Right flank : TCCATAATATACTGGTGTTATTATGAAGAATAAGCTTAACCTAAATTTTAAGTTAGGCTAAATATTTCAAAATAGAATAAAACATTAATTAAAAATATTTTTATCAAACATTTCTATAAAATTACATGAAATATTTGATAGAGGTTTATTTTTATGCCATATTAATCTTAGATATGACTCAATTGATGGTTCTATTATCTTTTTTATCTTTAGATTAACATTGGGTAAGATATTAGAAGCAGTAAGTGGTAAAATAGAAATTCCAATTCCAGCTTCAGCCCAACTTAAAGAGGTAATAATATCATCATTCTTACATATTATATGTGGTTCAAAGCCTGCCTTATTACAAGCGCTTTTTATAACATCATCGTATCTTCGATTAATTATTAATGGCTTATCTTTTAATTCGTTAATGAGAATAGTGTTACTTTCTATAGAATTATAGAATTTAGATTTTGCAATTGTGACAAAATAGTCATTAAAATTATTTTCAAGGTTAT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //