Array 1 6417-5917 **** Predicted by CRISPRDetect 2.4 *** >NZ_AULU01000020.1 Paenibacillus assamensis DSM 18201 H580DRAFT_scaffold00016.16_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 6416 32 100.0 34 ................................ GATACTATACCGACCGAAGTCATTCAGGCCATCA 6350 32 100.0 34 ................................ ACCAACTGCAAGAATATATCCTGAAAAATACAGG 6284 32 100.0 34 ................................ TTTTACTTCAAGCGTGGATGGCGCAACGCCATTA 6218 32 100.0 38 ................................ TCTTATCAGGTAAGTAGACGTCCCTATCGTTAGCTCAA 6148 32 100.0 34 ................................ TGCGATAAGAGCCGCAACGCTGTGGTCTGCTTCT 6082 32 100.0 34 ................................ GAATCAAACCGTTTGGCCTGGAGACAAATTTTTT 6016 32 100.0 36 ................................ TTATAGTGAACGGTGTAAACGGTCGTCATTGTCTCT 5948 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 8 32 100.0 35 GTCGCATCCTACATGGATGCGTGGATTGAAAC # Left flank : TGAGCGAAGTCCAGCGCTATTCTAATCGTCGTAGTAAAACGATGGATATGAGCGGTATGTTGGGTGCAATGACGCTAGAAGGGGATTTGACTCCTTTTGTTCCTTGGCTGAATGCTGCACGGACGCTTCATATTGGTCGTAATACGACTTTTGGATGCGGTCAGGTTGACGTTGTATTTGCGTAAAAATGACTATGTTCTTTAGATACATGGTTATAGACTTTAAAAGTTAATAGATAATGCATGTTCAAGTTACCAGATAGCATTTAAAAGTGGAATAGAGTATGATGGAAGCACGACTTTTGCTGATTGATCGAACTATCATTGCTTGGTGCGAATGTGAAGTGCACATAAAATCCTTGGGACATTCGCACCAATTATTTTCTAGTTATTTACTTTTTTGTTGCATGCACGTCTATTGATTTGGGGATATGTGCACTATTTGATTGACTGTTCCCAGCAAAAGAAGAACTAATGTTCTTTTATTGCTGTAATTTCGCT # Right flank : AGCTTGGGATATACAAGTACTTGTCTGGATGCTGTTAGTCGCATCCTAGGAGAATTAATATGGATGTATACAAAACCAATGATGTATCCGATTAAATCCGTCCACAAATCCGTGGACATAGGGGAAGTAAAAATGAAAATTTACGGCGCAATCATAGATAGTGAGACCCGGTGCACGCACTATCATACAGTGAAAGATATTATCGCTATCAAATTTTATTGTTGTAATCGCTATTACCCATGTTACAAATGCCACGAAGAGAATGAAGACCACGACATTCAAGCTTGGCCGCAGGAACAATTTGACGAAAAAGCTGTTTTGTGCGGAAGTTGTCGTGGCCAGATGACGATCCTGCAGTATATGAATACGAACGATTGTCCTTATTGCCAGGCTGCATTCAATGAGCGCTGCTCACTGCACTATTCGATTTATTTTGAATCGAACGAAAGCGACAGAACCACCCACGGATGAAAAATCCAATGCGGTGGTTCTTTTTTTCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTACATGGATGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-3.60,-3.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 13826-13459 **** Predicted by CRISPRDetect 2.4 *** >NZ_AULU01000020.1 Paenibacillus assamensis DSM 18201 H580DRAFT_scaffold00016.16_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 13825 32 100.0 34 ................................ ATTGATGGTGTAAACGTCGCGATCAAAGCGCTGA 13759 32 100.0 33 ................................ CTCTGCCTCCTCAACAAATGCTTTAGAGATGTG 13694 32 100.0 33 ................................ ATCGCCTTACGTTCCGGCGTGTCCTCGCCGTTC 13629 32 100.0 37 ................................ ATATTCTGCCCTCTGGAAGACATGCTCGACTATCCCA 13560 32 96.9 38 ...............................T GTCTTTGAACCATACGTGGATAGTTCCTTTTGCAAACA 13490 32 75.0 0 .............AT....GT..A.A.A...G | ========== ====== ====== ====== ================================ ====================================== ================== 6 32 95.3 35 GTCGCATCCTACATGGATGCGTGGATTGAAAC # Left flank : ATTCAAACACATGATAAAAATTTTGAACATGCAACAGCAGAAATCGGATATGACATTGCTAAAACATTTTGGGGAAGAGGACAGCTATTCGCTCTTTAATAGATAACCGGATTTTCAATTTTAGGGCTTAATCTGATTGAAGCCAATGTAGAGCTGGGGAATGTGAATTCAACCAAAGTATTACAGAAGTTGAACTTTACATTTGAGGGAACACTGAGACAGTATGAAAGAGTAAGTGGAATATTTAGCGACCTTGCTATGAATTCGAAACCACGATCTGATGTATAGAGTTGATAGTAAAAGCGATCTCTTTATTTATTTCGTGGTGCGAATGTGAAGTGCACATGAAATTCCCGGGAGATTCGCACCATTTATTTTCTAGTTATTTACTTTTTTCGTTTCGTGCACACCTTCTTTTTTGGTAATAAATATAATTTTTATTTTAATGTTTCCATCAAAAGGGGAATTAACGTTCTTCTTTTGATGGAAATTCGCTGTGA # Right flank : CGAGAATAGTTGTGTTGATAAAATAAGTTTGAAAAGACGGTACCTTCGCTAAGTCTAGCTTGTATGCTAGAGAGAAGGTCCGTCTTTTTGTTATTCACGTAAATGCAGCATATATGGTTGATGATTGTCGACTTTAGGGGAATTCAACCGAAATTTGATTTGAACAGAGAGGAGTTCAGGTGATTCACGTAGAAATATGGTGTTATATGGAGTATTAAATCAGGTTACCAAGCTTATAGAGCCCACTTATTCAACGTAATAATCATGCCAACATTTAACGCAATGGAGGAGTCAAATGACAACGAAATCGAACACTAAGCCACCAAAACAAATCATGATTGAAAACATTCGTGCAAATTATCGCCAATTAGAGAAGTCGATTGTAGAGCAGTTGTACATGAAGCATGATTTACATGGGACGACTGTCGGTTCGAATCGAGAAGATATATGGAAGCAATTGTTTGAGATGATTGTTCCGAAAAAGTTTGTTATCGAGTCGT # Questionable array : NO Score: 9.02 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTACATGGATGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.61%AT] # Reference repeat match prediction: R [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-3.40,-3.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 17927-17486 **** Predicted by CRISPRDetect 2.4 *** >NZ_AULU01000017.1 Paenibacillus assamensis DSM 18201 H580DRAFT_scaffold00013.13_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 17926 32 100.0 38 ................................ TTTAGAAGATACAGTGTTTGAAATAGAAGAGTTAATGA 17856 32 100.0 35 ................................ TACATCATGCCGCCCATATACCCAATTCCTGAAAC 17789 32 100.0 37 ................................ TCTAGTTGTTCCACTGTGAGAATGGTCTTAGGAGGGA 17720 32 100.0 37 ................................ TCTAGTTGTTCCACTGTGTGCGTGGTCTTAGGAGGGA 17651 32 100.0 35 ................................ AAACCCTTAGCGAATACTCATTAAATATAGCATAC 17584 32 100.0 34 ................................ CTCGCTGCCATGGGATGTTAGAAATGCAGTCTCT 17518 32 87.5 0 ....................AA......C..G | C [17488] ========== ====== ====== ====== ================================ ====================================== ================== 7 32 98.2 36 GTCACTCTCTACACGAGAGTGTGGATTGAAAC # Left flank : AACTTGTTATCTGCTATTACCGGCTTTGCAATATCGGTCGCTCTCTACGCGAGAGCGAGGATTGAAACCGTTTATTCAATATGGCTTTGTTGCTCATTTGTATGTCGCTCTCTACGCGAGAGCGAGGATTGAAACATATCAAGTGATGCAAGATTCTGTGAGCGAATAAGTCGCTCTCTACGCGAGAGCATGGATTGAAACACAACGAGACAGCCGTTATGCTCAGAAATAGTGCGGTCGCTCTCCATTACTAGCCGATTTAACCATAATAAAACTTAACGTGAACTACTAATGGATTGAGTGAAAATCTTTACTTTTCAATGATTTGATTTGGTGCGAACCTGAAGTGCACATAAAATCCCTAGGGTATTCGCACCTGCGCAGTGGTGCGGGTTTTGAACATTTTTCTTATTTTTGCACGTTGGAAAATGGGATGAAAAACGAGATTCGCACTTTTGGGCCTCTGAGCCCTTGCGGAGTAAGGGCTCAAGAAGGTCGCA # Right flank : TGATGGACTAACACAACTGATAAGGTATAATAAAGATAATCCGTGTCTGGCACGTACCAGAGCGGATTATCTTTTTTCTGTACATATGGTATAGGATAGGGTATATTTCAACATGCTTGGATTAAGAGCAATTTAGCAGGGACAAACGGTAATGCATCTACACGATCGACCTATAAGTCTGTGCAAAATAGGTAACGGAGTGATCATTTGAGTAAAAGCAAAGGTAAAGGAACGGGGAGAGGAACAGGCAAAAAAGGCTGGAACCGCTGGCAGGCTAGTGAGAAGCGGAGACAGAATGCGCCAAAACCTTACAAAAGCAAGGGTACTAAAAATCCCAATGGAACTAATGCTAGTGACACTAAAGGTGACTGATCGAAATAGAAAGCATGTTGCTAATTCTTTATAGAAGAGAACAAGCATAGTTTGCTGAGTAGTTAAAAGGAGATGGAGTAAATGGAATTGGACAACCAAGAATTGCAACAAGAAGCAGCTTCAAAATA # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTACACGAGAGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCACTCGCTACGCGCGAGTGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 18522-18226 **** Predicted by CRISPRDetect 2.4 *** >NZ_AULU01000017.1 Paenibacillus assamensis DSM 18201 H580DRAFT_scaffold00013.13_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 18521 32 100.0 34 ................................ CCCTCTGACTCTATTCATCACTTTTTTAATTAGA 18455 32 100.0 33 ................................ TTGTTATCTGCTATTACCGGCTTTGCAATATCG 18390 32 96.9 35 .....................A.......... CGTTTATTCAATATGGCTTTGTTGCTCATTTGTAT 18323 32 96.9 34 .....................A.......... ATATCAAGTGATGCAAGATTCTGTGAGCGAATAA 18257 32 96.9 0 ....................A........... | ========== ====== ====== ====== ================================ =================================== ================== 5 32 98.1 34 GTCGCTCTCTACGCGAGAGCGTGGATTGAAAC # Left flank : ACCAAGAGAAGCTGGCATTGTACACGAACTTGTTGTACAGCCAAGCATTGTTGATCGAAGGCTTGCCGCTGCAAGATCCAGTGGAGTTTACGAACAACATTTGCAAAGTGATGGTGTAGGTTGGAGGTAGACATTCTCTACAATTTAAAACAAGAGAGCTGTCGTTAAGGTGGATGGTGAGCAGTAAGTAATCATTTAGTGATTGTTGCGTATCAGTCTATTTTCTTAAAATGATTCACGTAACAAGGTATCATTCGTTTACCCTGACTCGCAAATGGATAACCCGTTCCGGTGCACGCTGGAGCGGGTTATTGTGCTAATTAAGGGCATATTGCGCGAACCTGTAGCGCACATAAATTCCCTGGGAGGTTCGCGATTGCGCTATGGCGCGGGTTACGAGCCTTTTTATCCTATTTTGGGCTAGAAAATGTTCTGAAAAAAGGGAGGTTCGCACTTTTAGTGCCCTGATCCCTTGTGTTATGCTAGCTGAAAAGACACCT # Right flank : ACAACGAGACAGCCGTTATGCTCAGAAATAGTGCGGTCGCTCTCCATTACTAGCCGATTTAACCATAATAAAACTTAACGTGAACTACTAATGGATTGAGTGAAAATCTTTACTTTTCAATGATTTGATTTGGTGCGAACCTGAAGTGCACATAAAATCCCTAGGGTATTCGCACCTGCGCAGTGGTGCGGGTTTTGAACATTTTTCTTATTTTTGCACGTTGGAAAATGGGATGAAAAACGAGATTCGCACTTTTGGGCCTCTGAGCCCTTGCGGAGTAAGGGCTCAAGAAGGTCGCAGTCACTCTCTACACGAGAGTGTGGATTGAAACTTTAGAAGATACAGTGTTTGAAATAGAAGAGTTAATGAGTCACTCTCTACACGAGAGTGTGGATTGAAACTACATCATGCCGCCCATATACCCAATTCCTGAAACGTCACTCTCTACACGAGAGTGTGGATTGAAACTCTAGTTGTTCCACTGTGAGAATGGTCTTAGG # Questionable array : NO Score: 8.88 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCTACGCGAGAGCGTGGATTGAAAC # Alternate repeat : GTCGCTCTCTACGCGAGAGCGAGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 11459-11094 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE383841.1 Paenibacillus assamensis DSM 18201 H580DRAFT_scaffold00024.24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 11458 32 100.0 35 ................................ ACAACAATTTCATTCTCAAAAATTTCAATTTGCAA 11391 32 100.0 33 ................................ TTTTTTCAACAATTCATTTGGTACCTTGCCGGA 11326 32 100.0 33 ................................ ACGATGCCCCCGAGGTTAAGGCCGCCGAACAGA 11261 32 100.0 38 ................................ TCCTGTATTTATGGGCTATGTGTTTGATTGTAAATATG 11191 32 100.0 34 ................................ TATATTGACAGCAATGTCATTAAGTAATAGTTGA 11125 32 96.9 0 ...............................T | ========== ====== ====== ====== ================================ ====================================== ================== 6 32 99.5 35 GTCGCACTCTACGTGAGTGCGTGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCACTCTACGTGAGTGCGTGGATTGAAACAGGAAAAGGGGATAGGAACAGCTGCAACGAGGA # Right flank : CGAATCTTGTCAACACATCTGATTGCGAATCTCTTTCAAAGGTAAGTTTGCTGATAGGTGAGCTGAAGATCTACCCTGGATCGTAAGCTTATAAGCAGTTAAGGAGCCATACCCATGCTCTGTTGGTTTCACGGGCAATGGTGACGACCAAGTTGGCCACAACTGTTTGGGGTGACAATGCAAGCTTTATGTAACGTCGCTAGTTGTCCTTGCTCAATTATGCTAAGATGGAATCAGCTCATTTTTGATTATTTATCATGGTGGAATGATATCTCTCTTCTTACACGAATTCGATCATGAGCCCTTAGCTTACTTAAACTTCATATTACATCCTTCATAATGAACTACCTCTTCATAACAGATTCGCTTCAGTGACATCACGAGAGTATTATCCTACATCAAACATTCATAAACGGCTATTCACACTACACCATGAAATATGTCTTACCATGTTGCTTATCAAGTTGTTGCAAACAACATCATTTTTGCTTTTTCTGGCT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACGTGAGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 290180-289741 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE383838.1 Paenibacillus assamensis DSM 18201 H580DRAFT_scaffold00003.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 290179 32 100.0 35 ................................ CTTTTGATATTTTTCCTCTGCAGCTGTTAACGGCT 290112 32 100.0 39 ................................ ATTTCCGCATCTTTTGAAGCTTGTTTTGAACCGGCACTG 290041 32 96.9 35 ..............C................. ATTGCTTCGGCTCCGTATGTCTCCTGTAGATTTGC 289974 32 100.0 34 ................................ TATTTTTGATTTTAAGACGTTTTAATTTTCGGAT 289908 32 100.0 37 ................................ TTTTACAGGAATAATAAATATGCTGCAAGCTGCGGGG 289839 32 100.0 35 ................................ ATACACCATGGGTGGGGAACAAAGCGCATTACGTT 289772 32 81.2 0 ........T..........GA.A..A.....G | ========== ====== ====== ====== ================================ ======================================= ================== 7 32 96.9 36 GTCACTCTCTATACGAGAGTGTGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTATACGAGAGTGTGGATTGAAACTTTTAACACGTAATCACGCGAAAGCTGTTCGCCTGTA # Right flank : GGCTGAAATCTATTCCGATGCTGCTCAACAAAAAATACACTGAAGCCGTATGTTGGCTCCAGTGTATTTTTATATCCACTACGGCTGCAGCGCCAGTTTGAACTGTTCCGTCAGGAGCGGCACCACTTCAAATAAGTCGCCTACAATCCCGTAGTCGGCAATTTTAAAAATAGGTGCTTCCGGGTCTTTGTTGATCGCAATAATGACCCGGGATGAGCTCATGCCGGCGACGTGCTGAATCGCGCCGCTAATGCCGCAAGCAATATAAAGCTCCGGCGTTACCACTTTGCCCGTCTGCCCAATTTGCAGCGCATAATCGCAATATCCTGCGTCACATGCACCGCGGGAAGCGCCAACCGCGCCGCCTAATACGGCAGCCAATTCCTCCAGCGGCTTGAAGCCGTCCGCACTGCGAACACCGCGTCCGCCTGAGATGATAACTTTTGCTTCGCTCAAGTCAATTTTCCCAGACGTGTTGCGCACAACATCACGGATAATCG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:0, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTATACGAGAGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 304698-303987 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE383838.1 Paenibacillus assamensis DSM 18201 H580DRAFT_scaffold00003.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 304697 32 100.0 38 ................................ AGACGGTATAACAACAAAGTTCGTGCTCGTTTGAACGC 304627 32 100.0 37 ................................ TTGGTGGCGAGCCAGAGAAAGTTGAAGTAACGACTTT 304558 32 100.0 34 ................................ TTCCATGCGATACGGGTAAAACGCTTAATATGCA 304492 32 100.0 34 ................................ GATCCCAACGCGCCATATATGCCATATGGTGTTA 304426 32 100.0 38 ................................ ACTGATAAGTACCAGGAGACGTATTCCACGACGTTTAG 304356 32 100.0 36 ................................ ACGTCTTGGATAATATCCATTTTTCATTAGGTAAAA 304288 32 100.0 37 ................................ CGTGGAATAAGTAAAACGGCTTGAGCAAAAAATGATA 304219 32 100.0 36 ................................ TCTTGGGTCTCCATCTAGAACCCTGAACGGAAGGAC 304151 32 100.0 33 ................................ ACCATAGACGCCCATGCATATTCTAGTGCTAAG 304086 32 100.0 37 ................................ TATGATGTGTGGTCAGGTGGAGCAACTGTATTTGATG 304017 31 81.2 0 ....................T.A-....T.CA | ========== ====== ====== ====== ================================ ====================================== ================== 11 32 98.3 36 GTCACTCTCTATACGAGAGTGTGGATTGAAAC # Left flank : ACTATTATTTTGGAATTAAGAACCCGCATGTTTCCATGCAGATTACATTTATCTAGTTAAAAGTTAATCTTGTTGAGAAACTTTTGGATTTAAATTACAATAAAATTGCGGTCACATTCTGCGTGGATGTGTGGATTGAAAGATGGCTGTGGAGATAATATTAGTAGCTTCGGCCAGTCACATCCTACACGGGTTGTTCTCCGGTTTTATGTAATTTATATGTTTAGTCAAGAAATTTTTTCGCTGTCTTGTTAGTTTTTTAAAGCCGATTTTGTAGGAAATTCAACAAGTTGATGGAAAAAAGTTTGATAACCCTATAATATATTTGTTTTGGTGCGAACCTGAAGTGCACATAAAATTCCAGGGGTATTCGCACCTGCATAGTGAAGCGGGATTAGAGCAATTTTTTGATATTTAAACCTTTTAAAGCGGATTGAAAAGGGTGATTCGCACTTTTGGATCTCTGAGCCCTTATACAGCAAGGGTTCAAAACGGTCGCT # Right flank : ATGCAAATAAAATCTAACATGCCTCATTTATCGTATTACATCCTATATGGATGAAAATTTTCATTATGTATAGGCGATAGCATCTATTCCATGAAACAGGTTGATTGTGATCATTGTGTATCCTAATCTGCCTGTTTTTTGTGCTTTCCATCATCAACTAAACCTAATGTACATGGTCACTGTATTAATTTTGATGCATTCAGAGCACTACCATGAAATACAGTCCTACAATTAACATCCTCCCTTATCTAAACTCCGAAAAAAATTGACATAGAACGTGTATTCGCTGACAAGCTGTGGTCATACGATTGCGCTATGATGTGGTAGACCCAAAAATAAGGAGAGAGCGATCTGTGGAAAAAGAGCAACGACTTCATCCAAATGTCATTCCATATTGGAGGCTACGGCGCTTGATATGGTTATTCAAGAGTACTACGTTATGGAGTGTGCCAATCGCCATACATTTAATATGGATGGAGGATTGGAAGTGGTTAATGTAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTATACGAGAGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA //