Array 1 14453-15550 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADIJK010000026.1 Bacillus sp. SD088 26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 14453 32 100.0 34 ................................ TATATCTGTTACCTATATAGACGCCAAATCAGTT 14519 32 100.0 34 ................................ AAAATAACAGTGCTAAATATAATGAAGCTACACA 14585 32 100.0 34 ................................ GTAATAAGACAATCAACTATATTAACGATCATGA 14651 32 100.0 35 ................................ CAGTTATCCAAACAGTGTCAAAGCAAGGATCCTTT 14718 32 100.0 34 ................................ ATTTTGCCTTATTTAGCTAAATTAAGAATATTGT 14784 32 100.0 38 ................................ GATGAACAACAAATCCAAGCAGAATCGAAACAAGAAGT 14854 32 100.0 33 ................................ GTGTCAACGTTCGCCCCTGAATGCTTTGCAGTT 14919 32 100.0 35 ................................ TTTTTGGTACCTTGCGCTTGTAGCTGGGTTTTGGC 14986 32 100.0 34 ................................ AATCCTAGCTAATTCGTTTGGATCAATATTTATT 15052 32 100.0 33 ................................ TATAATAGCGATTGTTCCTCTCGCTACAGCTGC 15117 32 100.0 34 ................................ TTATTTTTATACCCTCATTCTCGGTATTTAGAGA 15183 32 100.0 35 ................................ TGGTTTAAGTCAAGAAGAACTAGCACAAGAGTTGT 15250 32 100.0 35 ................................ TGACGTCATCCTTGTGATAGGAGTATGGATAGCCT 15317 32 100.0 35 ................................ CTGACGGGATAGGTGGCCATGTAAAGAGTTGGAAG 15384 32 100.0 36 ................................ GCATTTTGGAACACAAGGGGTGATTAGATGAACACA 15452 32 100.0 35 ................................ ATAATAACGTCATTTACTTCTAGGTTTTTAAGGTT 15519 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 17 32 100.0 35 GTCGCACTCTTCATGAGTGCGTGGATTGAAAT # Left flank : CCTGAACAAGAAAAATATACAACTTTACCGAAGCCATCCAAAATTCCGTATCAAACCTTTTGTGGGACTTGAAGGGCGCACATTCTTGAAAGAAGAAAAATGGATAAGGTCGCCATATCCTGCTTCAGTTTTTGAATAAAAATGTAGATAAAATAGTTCATTAACATTGATTGATTTGATATGATGGATTTAATCTAAAAATAGAAGCAAGGGTTCATGAACTACGCTGTTAAAAGTATAAAATGTATTTTGAAAGAAAGAAGAATCACAATTCATTTACTAGTATCTTTTTTATCATGGTGCGAACCTGAAGCGCACATAGAAAGCCTAGTAGATCCGCACTTTCCCAAATCATTAACTCATCCCTTGATCTAGCAGGGGAATTAGGCATTTGTCAGATATATGGAAATTGAACATATAAACAAAGCTGCTCTTGCATACGGAGGTTCGCACTTTCAACTGTGCAAAGTATTGATGGATCAGCTTGGAAAACGGACGCT # Right flank : TCTCCCTCCGCAAAGACGTTGACGACCAGGAATGAGTCAAAACGGTTCAGTGGTCGAAAATTACTCATCGGAATTGACTGGCCGATTTTAGCTACAAGAGCTGAACTATGGGCTGTAGCCAATATTTTAGCGCCTATTCTACTTGTTGTAGCAATATTCCTCCCAGGAAACACAGTCCTTCCACTAGGTGGAATATTGTTAACTGTGTTAGCACCAGCCCTATTAATTGTTACACGAGGTAGAGTTGTGCGTATGACAATCATCGGGCCGATCTTAATTCCATTGTTTTTGTGGGGAGCCACTTTGATTGCGGAGTTTGTTTCGAAAACCTCGAAAGCAATGGGGAATTTCCCAGAGGGATTATCTTCTAATGCCTTAATCTCCTCGGTAGACTCCGATCCGATTGAGAAAATGCTCGCCATTTTGTTTGGAAAAGCTGTTGATACAATGGACATGAAACTAATAGGCTTTTCTATACTAGCGTTAGTGGTATATATCTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTCATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 58670-59566 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADIJK010000026.1 Bacillus sp. SD088 26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 58670 32 100.0 34 ................................ ATATTAATGCAGGTGGTGGAACAGGATTCGAAAG 58736 32 100.0 33 ................................ AAGAAAAAGAAAGACAACTTAGAGGTTTTACAA 58801 32 100.0 35 ................................ TTAAACGAAGTATTGGTGCTTCTGTTAAGGACCAT 58868 32 100.0 35 ................................ TTGTCATACGAATGTCATATGATCGCCACTAATAA 58935 32 100.0 34 ................................ CACCCCAAATGTGGGAGGAGGCCCAAGATAAAGA 59001 32 100.0 36 ................................ TGATGTTTTTCCATGTATTTGTGAAAAAGTTAGCCA 59069 32 100.0 34 ................................ TTTTAGACAACGATAAGGGGGCATCATTTATGTG 59135 32 100.0 34 ................................ CACCCCAAATGTGGGAGGAGGCCCAAGATAAAGA 59201 32 100.0 34 ................................ TGGAACATCCTCACTCCACGAGATTAACCCACTA 59267 32 100.0 35 ................................ AAATAAAGGGGGAATCCAAATGAGACAAAAAGGAC 59334 32 100.0 34 ................................ ATCCCTTCCGTTCCCAAACGATTAAATCGCCTTA 59400 32 100.0 35 ................................ TTTCAGCTTCAATACGTTTGTCTCTCTCGTCTTTT 59467 32 100.0 35 ................................ TTTAAAGCAGGTTTGGCATTAAGTTTTGCCAAAGC 59534 32 96.9 0 .............................G.. | T [59563] ========== ====== ====== ====== ================================ ==================================== ================== 14 32 99.8 35 GTCGCACCTTACTTAGGTGCGTGGATTGAAAT # Left flank : TGAGTCACCCTCATTTCTTGTTGGGTATTCTCGACGATTCCCTACTTCAAAAACGGACGTTTTAAGTGGCGGGAGGTTCATTGGCAACACTATGGAGGTGGGCTTCCGATAATATTCTAGAACATTATCGGGAGGATAAATAAAGCAGTTCATTAACTATTGCTTGATTTGGTATGATAAGATTAATCTGAAAATAAATGCAAATCTCCATTTCATATTTTTATTTAGCGGAAGGAGATTATTGTTGGGGCATAGCATTGTGTGAGATTCATCAGTATCTAATTTATATAATCAGTGGTGCGAACCTGAAGCTCACATAAAACTCCTAGGAGATTCGCACCTTCCTACCTTAATTGATTCGTCTCTTGATCTAGCGGGATTAGCAACTACTTGATAGATATATATAGGAATTAGTTACATAATCAGAGCTACTCTTATCTCAGGGACTCGCACTTTTTGGTGTGTAAAGCATTGATACACACGCTTGGAAAATGATCGGA # Right flank : TGTACCTATATTCATAAAACTCCCGCTACACTCCTCACGAGTGTGCGAATTGAACTTTACATATAGTTTACTGATTAGGGATGTATATATAATAATCCTCGTAGTAGAGTGCGAGTACTATTATGACCATCATAAAAAATACGCTACTGAATATAGTGAAAATAAAACCTCCTATTGGAAATATTGGATATTTCATTGCATCCTTTAAAGGAATAACCTAGTATATATAGTAGGTATGAAAACAATTGCTCGAAGTCAGAAATGCTAGAATGGTTTAAGTAATCTCTAAAAATTGGTTTTCAAAATGCTTGGAGATATAATTTGCAACTATACTGATGCAGATAAATGGTTGTGAGACGAGCATGCTAAAATAGAAATACGGGGGTATATAAAAATGGAATTATATTTAATTCGGCATGGAGAATCAGTCGGAAATGCGACAGGTAAAGATATTCCTGATTGTGTCTTAACAGAACGTGGAGAAGAGCAAGCAAGGCTTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACTTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 85643-86407 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADIJK010000005.1 Bacillus sp. SD088 5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 85643 32 100.0 33 ................................ GCCTTTGAAAGATAAAATATATTTTGTCCTAGT 85708 32 100.0 34 ................................ TGATATTCACAGCAGATACAAAAATCGGCTAGAT 85774 32 100.0 36 ................................ ATCTTTGATCTGCTCAACTAAAGGCTTGGCGGTTAA 85842 32 100.0 34 ................................ CTCTGTTTTGTATTCAAGTAGCATGACCGTTGAC 85908 32 100.0 35 ................................ CTCTTAATCTAGTAACATATTCAATACCAAAAGGT 85975 32 100.0 34 ................................ CATGCAAGTTATGGATAGAATCTTATACAACATT 86041 32 100.0 36 ................................ TTTTAGACCTAACTCTTCATTGAGAAAAATCCAAAA 86109 32 100.0 34 ................................ TCGTAAAATCTCAATCTCTTACTTTGACTGTATT 86175 32 100.0 36 ................................ CCCTACACTCATGGTTCTCACCTCCCTAAAACAAGT 86243 32 100.0 34 ................................ AGCTATAGGGATTTCAGGTCTTTCAGTCAATGAA 86309 32 96.9 34 ...................T............ TATGTGTCCGCAGCATCGAAAAGATATTTTAGAT 86375 32 96.9 0 .....................C.......... | A [86396] ========== ====== ====== ====== ================================ ==================================== ================== 12 32 99.5 35 GTCGCACTCTTCATGAGTGCGTGGATTGAAAT # Left flank : AGGAACAGCTTATCTCCCTTCCTTTGTTGCCCCATTTGCATCTGATAATGTGGTAGGCTTTATCATTTCCATGCTCGTCACTTTTTCTTGTTCGTTACTGATTACCCTGTTTGCGAATAAAGTGGTGAGGAGAAAGAAGCAGGAGATTGTAGACAATAGTGGGATTGTTGAGGTAGAGTAAGAGTGTGTTAGATTGATCATTTTTTAGTGAAAAGTTAAAGAGATTGGCTACTGCCCCAATTGAAAAAGTTTATGTTTTAGTATGCTAATGTAGAAAGGTATAGTATTAGATAAAAAGGATTGAGCAAAAAGAACTCAATTTTGATAGACCAGTGCGAACCCCAAGTGCACATGAATATCCCGGGAGACTCGCACCAGATTTTTTCACTTTTTTATTCTTTTTATCACTTTTGCCGTAAAGTTTTCTCTAAAACTTTATAAAATAAGTATATTTTGGGTAAAAAACTCATTTTAAGAGCTATATTTTGCCTAAAATCGCA # Right flank : TAAAGCTAACGGCTCATTTAGACCAGTATGCATCGTTGTACCTCCTTTCTTAGGGAAATAGCCTGAAATAATCGATGATCCCTCGGACATGCGTCGAATCTTCCCTTCCCTAATAAAAATACATAAGCTTTTACTTTCTCGCGAGTATGCAAATTGAAAAAAATTCCGTTCCCACATTTCTGTAAAAAGTTTGAAATTAATCCTGAGAGAAACTAGCTTGCTAGCTAGTAACTTAGGATCTATTTGTTTTGTTTTTATAATCGAGTTAATTTCATAATTACGGATTAAAAGATAAAACACGAACATTGTGGTAATTCAAATATTTATCGTAGCCTTCACACCGGTTGATTGGAGCGGAAATCAACATTGTTCAGATTTTTAACATAAAATTTGTATTATGAAATTGACTCAATCGTTTAAAGAATCGATATTAGGTCTTGTTATGTAGAAAAACTTCCAATTATTTGAAGGATTTTGCAGAAAAATACAGAAGTATAACT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTCATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 95136-95631 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADIJK010000005.1 Bacillus sp. SD088 5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 95136 32 100.0 35 ................................ AGTAATTCTTTAAAATCTCCATTCCCGCGCACAGT 95203 32 100.0 34 ................................ AATTAGATTTTTTACTCTTTTTAAACTAATGCCG 95269 32 100.0 36 ................................ ATCAAAACCAAATGTTAATACAAACCAATAGGGGAT 95337 32 100.0 33 ................................ CTCTAAGCACTACTGTATACTTTTGACCAACAA 95402 32 100.0 34 ................................ ACCATAATCTATCATCCTTTCAGTTTTTTAAAAT 95468 32 96.9 35 ..............G................. TCTAACGTCATCTGCACGTCAAGGTGAAATAGCTG 95535 32 100.0 33 ................................ AAAGCTAATGGGTCTTTTAGACCGGTATGCACC 95600 32 93.8 0 ..........TT.................... | ========== ====== ====== ====== ================================ ==================================== ================== 8 32 98.8 34 GTCGCACCTTACTTAGGTGCGTGGATTGAAAT # Left flank : TGGACGAGTATCCTCCATTTCTATGGAAGTAGGTGAAAGAGATCTTAGTATTAATTACATATGATGTGAGCACAACAAGTGGTGAAGGAAGAAAGAGATTGCGCAAAGTCTCGAAGATTTGTCAAAATTATGGGCAAAGAGTCCAAAATTCAGTGTTTGAATGTGTCGTCGATGCAACACAATATACAACTTTAAAATTTGAACTAGTCAATATTATTGATGAAAATCAGGATAGTCTTCGCTTTTATCGGTTAGGACATAATTATAAGACGAAAGTTGAACATATTGGAATCAAGGAATCAATTGATATAGAAGGACCTTTGTTTTTTTAGTGCGAATGCCATGTGCCCATGAATTCCTTGGAGGATTCGCACCTGTTTTTAAAACTTTAGAGGTGCATTATTACATGTTTTGATTGAATTGTACTTAATTCATATTTAAATACAATGAGATTTCGACGAAATTAGACTTTTTTAGGACCGTTTTCTAAAAAAATCGCT # Right flank : TTTTATCATATGCTCAATATATGGGATTAGAGGATGATATCCAATATGAGGTGATTGATGGACAAATTTATAATATGTCCCCTTCCCCGAATGTAAAACATCAAGCAATTGCGATGGAGCTTGCTACTGAATTTAGAAATCAAAAATGTATGGTTCTTGGAGAAATGGATGTTTGTCTCTGTGGAAAAAGGGATGTAACGCAAGAAAATGAATGGGTCAAACCAGATATTATGATTGTATGTGATAAAACTAAGATACAAGAAAATTACATTTCAGGTGCTCCAGATTTAATTGTTGAAATCCTATCAAAGTCCACTGCTAAAATAGATAAAATGATTAAATTTAACCGATATCAAAGAGCGGGTGTGAAAGAATATTGGATTGTTGATCCCGCACATGAAATAATTGATATTTATAAACTCGAGAATAACCTTTATAAACATGGTGGTACATATGCCAATAATGAGGTTATTAACGTAGGGATCGTTGATGATTTATCA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACTTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //