Array 1 138104-137656 **** Predicted by CRISPRDetect 2.4 *** >NZ_SGSX01000010.1 Acinetobacter sp. WCHAc060025 10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 138103 28 100.0 32 ............................ TTGCTCAACAAACTCCTGAACAACTGTTGTGT 138043 28 96.4 32 ............A............... TCAACAGTTTCAAGAAATGCATTTTCTTTTCA 137983 28 100.0 32 ............................ ACACTGGAAGAAAAAAGAATAATGGAACGAAT 137923 28 100.0 32 ............................ TGATAAGAAAATTATTGGGAAGATGACGAAGT 137863 28 100.0 32 ............................ AACTAAATGAAAATCCGCCCGCCATTTACGCT 137803 28 96.4 32 .......C.................... AACTAAATGAAAATCCGCCCGCCATTTACGCT 137743 28 96.4 32 .......C.................... ATTGTGGTAAGTTCCACGAAATACAGGTGTAG 137683 28 96.4 0 ............A............... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 98.2 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GATCGGGATTTAAAAGCCGAAGGTTTTTATTTAGATGATCTGGATATTCAAAATGCATTAAATGGCTTTGAAAAGGAAATTCCAAATTTAAATAAAGTCGGTGATTTATTACTTGCCGAAGCTGTAACCACCAAACAACTGTATAAAATCGCGGCAAAACGTACAGGTTCTAAAGATTTTAGCCGTAATCCTGAACAGGGTGATTTAGCTAATGATTTTCTTAATCATGGCAATTATTTAGCCTATGGACTCGCTGCAACCACGCTTTGGGTATTAGGCATTCCACATGGTTTTGCGGTGATGCATGGTAAAACCCGTCGTGGTGCTTTGGTTTTTGATGTGGCGGATTTAATTAAGGATGCCGTGGTTCTGCCCTATGCATTTATTTGTGCCAAAGAAAAGATGTCTGAGCAAGAGTTTCGTCAGCAGGTATTGCAGAAATTTACCGAGCATCGCGCAGCTTAGAAATAAAAAATACTGACTTGGGGAAAGTAATATAT # Right flank : AACCACTACAAATTGAGCATCCAGAAAAAAATCAGGACAAAAATCGTCATATGCAAAATTTGAATCGGAGCAAAAACTAAAGCAAAACGTGTTCCACCTGTAAGGAGAGCATTGACCGATTTTGCAATTGCGTGTGCGCCCAAACCAAGTCCAAATGCCCAAGCCAAAACTGAATTACTAGGCTCGCCTTGAATCACAATTGTTGAAAGCGCGCCATGAATTTCAAACAAAGATGCCAAAAGCGTTCCCGCAATTAACCCAGCATCACCAAGAATAACATTCAGCCCATAGACACCCGCTTGAATCACCGTTAACGAAATAACAATAATCGCAGCCTCTTTTAAACTAAACATCCGACTGTCTGACTGTTGAACACTTTCTAAAGTTTGAGAACTACGCATGAACCATACCGAGAAAATGCTCAAAATCAACATGGCAATAAGGCTTGGAAGAAGAATGACTTTAAACCACGACAAACTTATCCCAATGACAATAATCAA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : TGTTCACTCCCATGTAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 14496-15063 **** Predicted by CRISPRDetect 2.4 *** >NZ_SGSX01000034.1 Acinetobacter sp. WCHAc060025 34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 14496 28 100.0 32 ............................ ACTGATGAAACAGTGTTGCAGGGTCATAAAAC 14556 28 100.0 32 ............................ AGCAGGATCAAGAACTTTTTGATTAGCAGTGT 14616 28 100.0 32 ............................ AGCAGGATCAAGAACTTTTTGATTAGCAGTGT 14676 28 100.0 32 ............................ TTTTCACACATGGAATGGATTAATTTTAAGAA 14736 28 100.0 32 ............................ ATCAGTCAACACTGTTGGATCATCAACGCCAT 14796 28 100.0 32 ............................ GTACTTATCTCGTGCCTTAACTGAAGAAAATA 14856 28 100.0 32 ............................ ACTAACAGTTGAAGCATTAGCTTGATTAATTA 14916 28 100.0 32 ............................ GATTGATTTAGAAGAAGTCATAGAAGCACAAG 14976 28 100.0 32 ............................ TGAATTTACGTCAGCCCATTTTCGGGCTCACG 15036 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 10 28 100.0 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : TAGTGATAGGTGCTTTTGTGGAAGCACGTTCGTGTGAGCGTTTTTATGCTTTAGCACCGATTGTGGATGAAGAGTTAGGGCGTTATTATCGATATTTGTTGAAGTCTGAATCTCGTCATTATGAAGATTATTTGACTTTGGCTTTGGATGTTGCCAAAACTGCGAAGTTGAAAGATCCTGAAGAGGATATTCAACAACGGATTGAGTTGATTCGTGAAGTGGAAAAAGAATTAATTTTAAGTCCAGATAAGTTATTCCGCTTTCATAGTGGCGTACCGATGAAAGCTGTTGCTTGATGTTTTAAATGTTTAAAGAGAGGGAAGTGGTGACACTTCCTTTTTTTTTGTTTTGACAAAGCCAAGTTTTTACCCCAATATTTTAAGCACTCTTTAACAGCTTATATAAATCAATAACTTGCAAGTTTAATAAAAAACTTGGGTATTTTACATATTTTTGAAATAACTCTATGTTTTTATTTTGTTTGTGGTTAGAATTTTACT # Right flank : AATGCAGTTAATATCCATCCAATTGAGCTTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 14976-14169 **** Predicted by CRISPRDetect 2.4 *** >NZ_SGSX01000035.1 Acinetobacter sp. WCHAc060025 35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 14975 28 100.0 32 ............................ ATTCAAGCATCATTGATTGTTCCCAACCAAAG 14915 28 100.0 32 ............................ GCCTTATGTTGAGATTAAAGCTAGTCCACTTA 14855 28 100.0 32 ............................ CATCATCCGTTTTACTTACATGGCGAGTTGCA 14795 28 100.0 32 ............................ AACCAAACATACGTCTTAAAATATAGTGCTTT 14735 28 100.0 32 ............................ AGTAGAGCAAGAGCGCAACCTGTACCATTAAG 14675 28 100.0 32 ............................ GCAATAAATTGGGTGGTACTGCTGTTGTTGCT 14615 28 100.0 32 ............................ CACACAGCAAATACCAACATCAACAAATCAAG 14555 28 100.0 32 ............................ AAACAACTCCCCTGCCAATGCATTTACTTCCT 14495 28 100.0 32 ............................ AACACCAAAAGAGTGCTTAAGTAGATATGATG 14435 28 100.0 32 ............................ TACATTGGACACATCAAACAACATATTATTTA 14375 28 100.0 32 ............................ TGTTACCTTGTAATCACCATTGTAATCATTAA 14315 28 100.0 32 ............................ TTTGTAATTAAATCTTTGTTTGCATCAAGAAA 14255 28 100.0 32 ............................ AGGAGTCATAACGCCTGATTGCAACATGTGTT 14195 27 92.9 0 ..............C.........-... | ========== ====== ====== ====== ============================ ================================ ================== 14 28 99.5 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GCATCATGACGGGCGAATATTGCTACCAAA # Right flank : TATTGATATAAAAAAAGCCCACTTCATAATGAGTGGGCTTTTTAGTATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGAATGCGATTATAAGGAGATTTAAAAAGGGGTCAAGCCTTAATTGTCATGTTGGCTTCATTTTTTAGTTATATGCTTTTAATTTGATCAAAAAACTGAAAACTTTCAGAAAAAATAATTGAAAAGCTTGCAACAGCTAAATTTGCTTGTTAGATTAAATTCATAAAGTGAGTTTAAGCAATGCTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGAATGAATACGCTTACGATTTCTCAAATTTTTGAAAACCTCTCTTTTTATCAAGACAATTATCTGTCTATTCTACAAAATCCTGAACAATATTATGTAGAAGTAGAGCATGCTTCTATAGATGTTTGGCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //