Array 1 5163-4708 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOFU01000100.1 Streptomyces griseofuscus strain NRRL B-5429 contig100.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================== ================== 5162 28 89.3 33 ...AC......C................ GACGCTCGGGCCCATCGCCAGCTTTTTCGGGGA 5101 28 92.9 33 G.....................C..... GACATCATCCGCGTCCTCGACCCCCGCATCGGC 5040 28 100.0 33 ............................ GCCGATTGGTCGCCAGCCCTCGCGCTCGTCGCG 4979 28 92.9 33 G...............G........... GCGCCAGCACAACACCGAGCACGCCCGGCACGT 4918 28 92.9 33 G.........T................. GCCGTGCTTGCCGGTGGGGTTGGTGCAGGCGAC 4857 27 78.6 94 GA........T.-.C...T......... GCAGGGACGCCGCACCTGAGGCGGCACCGCGTGGTGTTCATAGCGCGAGCGGAGCTGCGACGTACGGCGCCCCGCGCTCCCGGGCGGTCTACGA C [4848] 4735 28 67.9 0 G.G.T...A...TGC...T......G.. | ========== ====== ====== ====== ============================ ============================================================================================== ================== 7 28 87.8 43 TTCCGCTCCGCGCAGGCGGAGGTGAACC # Left flank : CTCCCTGGTCGATGTCCCGGAAGAGGCCAGCCAGCGGTGGCATCTACGGTGATGGCCGATCACGGGCCACTGAACTGCACGAATGGCCTTTCCGCTGTTCCCGCTCGTGCTCGTTGATGCAGCCGGAAGTCCCAGAGAAGTCCCAAGGCGCTTCCACAGTCCGCAGCCACTCTTTCGGCCCTATGCCGTTGGGAGGCGCGGTGTGAGCTGGCGCGCGGGGACCATCACGTGATTCGAGCTGGCCAGGACCTCGCTCAGGAACCACCCCGCGTATGCAGGGACCAAACCCCCTGCGTGCCGCGGGACTTCGCGATGCTGGGACCACCTACGCGTGCGCGGGGACCACACGCCGCGGCCAACCTCCAGCCGGCGACGGGGGACTACCCCGGCGTACGCGGGGACTACGGCGGCGCGGGCGGCCTGGCCGATGGGCGGCGGGGGCGCCCCCGCGTGCGCGGAGCGGACCAGCGTGGGTCGTCAAAGGTATCCGCGAGCGGCGG # Right flank : GCGGGCGGGGAAGTGGCACTCCGCCTGCACGGAATGTTCTCCGCGTGAGCAGACGTGAGTCGAGCGGCGTATTGGCGCGCCTGATCGTTCTTCATCGGCCAGCGTCATGTCGAGAAGGGTGCGTTTCTGTTCAGCGCGACCCTTTGTGTCGCCGAAGAGAGCGGTGCTGGCGCGCTCCATCTTGCCAGTTCTCCGCGATTCGCGTTCCGCATTTCTACGCGATGTTCCGTTCGACAGGACAGGCGCTTAGAAGGCGCCTGCTCTGTCCTCACGTTTCCTGGCCGTCGAGGTGCAGGTATGGGTGGGTTAGGGCAGATTCGCCGACAGCAGACACATTGAGTCCCATACGGACTGGATTAACTCGGCGAAGGAAGCAAACCTAGAGCGGTCTTGGGAAAGCAGAACCTGCTCTCTGCGCATCGACCGAACCGCGACAGGTGCGTCGCGGGCGCAACATAGCCGACGATCGCCGGTTGGTCAAACCGGCGCTTCTCCAGACC # Questionable array : NO Score: 3.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCGCTCCGCGCAGGCGGAGGTGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCGCTCCGCGCAGGCGGAGGTGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //