Array 1 4419-3170 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOAG01000147.1 Lacticaseibacillus paracasei strain HZ-1 147-le_14086, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 4418 28 100.0 33 ............................ CTTCTCTGACTGGCTTACCGCTTCTTTGCATTT 4357 28 100.0 33 ............................ CGCTTTTATAACATTTATGCCGCATAAAAACAC 4296 28 100.0 33 ............................ CTGGCGACAATTCGATTTCTAAACGTACTACCG 4235 28 100.0 33 ............................ CTGGCGACAATTCGATTTCTAAACGTACTACCG 4174 28 100.0 33 ............................ CCAGCCATTGTAATTCCTCCTAATGCGAATTTC 4113 28 100.0 33 ............................ CGCGTTTGATGATGGCAGCGCGGCAACTTTAAC 4052 28 100.0 33 ............................ TCAAAATCGCGACCTGGTTCAAAATGCGGCTGA 3991 28 100.0 33 ............................ TGCTCGTGCGGTGTCTGGAGTTGCTGGCAAGTA 3930 28 100.0 33 ............................ CTATATTTAGCTCAATTGCAACAAGAGGGCAAA 3869 28 100.0 33 ............................ CGACAATAACGAGCTTGCGCTGATGGCAACTTT 3808 28 100.0 33 ............................ CAAGCGAGTCCGATCCTCCCGTATTGTGAGCAT 3747 28 100.0 33 ............................ TGGCTGTTAGTTTGGCCAGTGTTATAAGCCGCA 3686 28 100.0 33 ............................ CAACTGGTGCGGTAATCGGGCGGAAATTGTTAA 3625 28 100.0 33 ............................ CGATATTATACCGGTGTTTTTACCGGTTCTCCT 3564 28 100.0 34 ............................ TGAGTTTGGTATCACGCTCTTTTGTGGTCGTCAG 3502 28 100.0 33 ............................ TAAATGTACTTCTTCCACCACGTGGCACTATAA 3441 28 100.0 33 ............................ TGCCGAAGTTGAAGACATGGGTCAGGCTTTTGC 3380 28 100.0 33 ............................ CGACCAAAGCCAAACCAACACAGGCGAATACAA 3319 28 100.0 33 ............................ TAAGGTTGTCAACACGGCTTATGCCAACAAGGA 3258 28 100.0 33 ............................ CGACATCATCAAGGATTGCCAGTTCAACTTGGG 3197 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 21 28 100.0 33 GTTTTCCCCGCACATGCGGGGGTGATCC # Left flank : GAACGAGATGCAATTATTGCCATTGGGGCGGTAAAAGGACCGTCAGTTAACGAAACCGAAAAATTCACTACCTTGGTGAATCCACGAAGGCCGCTTCCATCAACGGTTGCCAAGTTGACGGGATTGTCGGCGGAGGAGTTGGTTGCCAATGGGATCAGTCTGAGCGAGGCAGTGCAGGCCTTACGGGATTTTACCGGCTCGCTCCCTTTAGTCGGATATAATCTGCGTTTCGACATGGGATTTCTTTCGGCAGCGGGTCGTGAAACTGGGTTAACGTCTTTTGGGAATCAGACTTTTGATTTACTACCGCTTGTTAAGAAATCCAGTCGCTTTCTGGATAATTACAAGCTTAGTACAGTGCTGGCACATTATCAGATCGATAACGAGCAACCGCATCACGCGTTGTCTGATGCGACGGCAACAATGGCACTGGCGGACAAACTCATAAAAAAAGGGATCTTAACGATTGGCAAACGTTGATGGGATAGGGATTTTTTAGT # Right flank : TACCAGCACGGGGTTACCATGTCAACCCTTTTTGTTTTCCCGTATGTGTCAAGTCTTTCTCGGTTCCACTAATTGAACTATTCTTTTTTGCTCGACTGCCGGTCATCCTGGTCTACTGAGTGGGTTCAGTTGAAGATGTGTGCTAGGTGACCAGTGCCCGAACTAGTACTTGCGTACAGCGCTATACGTCCCTGATAAGCACCCTGGTGCGTTGTGGGCGCTGGCCCAAACAGCTGAAGGCTCCGAAGCGTGGTCTTCACTTCTGGCTTGATTTGCGTTTCCAGAAACGCCGTAGCTTCCAGACTGCTGAGGCAATCATCGTTCTGCAGCGCGTCAATGATCCTCAACTCTGCGATCAGACCACTTCTTGTCCATGAACGGCCCTGCAGCTTGGTCCGATACGTATACCGTCTATGGTTAGACTCACAGCTTCCAAGTCCACGCCGATCCAATTGTCGATTCGAAAGTGCCTCGATGTAAGGCCAATTTCGGTCAAGATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCACGTGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //