Array 1 12560-11685 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMJR01000099.1 Robinsoniella peoriensis isolate 6600698, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 12559 30 100.0 36 .............................. TTTTGTCTCAAACCAGAATCTAACATAAGTGCAATA 12493 30 100.0 34 .............................. TTGTTTTAAACAAAGGAAAAGCGTGCTGATATTC 12429 30 100.0 36 .............................. TCTGGTTCCCTGTTATTGTTATGGCGCTGTCTTTGC 12363 30 100.0 33 .............................. CTTTCTTGTATAGTTTTTTTCGTGCCATTTTGA 12300 30 100.0 35 .............................. CAGAATAACATGGAAGCTTAACAAGTTCATCCTTT 12235 30 100.0 34 .............................. CATGTTGTTCCTATTTCCATATGGCCAGAAAGAA 12171 30 100.0 36 .............................. CTGTCATTTCCACGCTAAACATACAGCGTGAATCGA 12105 30 100.0 35 .............................. TTGTCTATTAATACACCATGATTTCCTAAATGTCT 12040 30 100.0 34 .............................. GCTTCAATTCGATGGATTCACAGCCGAACAAGCA 11976 30 100.0 36 .............................. TTCGTTATATCCTTATAAGTGCAGGAATAGAGGATT 11910 30 100.0 36 .............................. TTGGATACATGTACAGAGTGGAGACAATGTTTTCAC 11844 30 100.0 35 .............................. CCATCTCCGAAGGTTAATTGTGCACATTCTTTAAC 11779 30 93.3 35 .........................CT... CTCTTATACGCAATTTGAGTATAGCACATTTCTAA 11714 30 93.3 0 .........................CT... | ========== ====== ====== ====== ============================== ==================================== ================== 14 30 99.0 35 GATTAATAGTAATATGGGATATATTGAAAC # Left flank : ATGATCAATCCATGGAAATTAAAAAAGCAACTGATTAATACAGATATATGCAGAAATTGTTTCAATAAAAAATATGGACTTAATTTGCAAAAAGAAGACATTCTTTATAGCTATTATGCTGCGAAATGTAGTGAATGCAATGCTCTTAAACATACAGTAAAAGGCTTTAGAGTTAAAGGATTGATAAAGATATTGTGTTGTAAAAGAGGTTTCGTCAAGAAATCATATTAGGGAAGGATTATTTTAGACGGTACAGGTATTAATCAATGGTTTATAAAAGGTCTACTTTTAATTATAAAATTATTGGTACAGAAAAAGTCATTTTAAATTTACCAGGCGTAAAATTGGAAAAAGAGCTGGATTGCTTGAAAATCGTGGGAAAATTGGTATTACGTGATAAAATTAGGAAAAAATAAAGTGGCTGGTAAATAATGTAAAAAGGCTTGATTTTATGGGGGTTTTGAGGTATAGTGGGAAGAAAGAATGGTGGAAAAACGTTG # Right flank : CAATCACTCCTTAACCGATCAAGCATCTATACCTATAAAATTATCAGTAATTTTACAATTCTATCAGTAATTTGTGCATAATATACTCGAACACAGATATAGAAAGGAATAATTAACCAGAGACGATATCAATCAAAAAATTAATCCTAATTGTTTTTGGTTACTCCTTGACAAATGACCAAGAAATGGTTAGAATAACAGTTAGTCGATATGACAAAAACTGTGATGAGGAGTATTAAGAGTACTTGCGTTTCAGAGAGCTGCCGGATGGTGCGAGGCAGTAACGATAAAACTCCCAACTCGCCTCGGAGTTCCTTGATTGAATTTAGTAGATTAAGGCGGGAATTCCCGTTATAGAATTAATGAGTGCATCCTTTTTGGATGAATTAGAGTGGTACCACGGAAAGTAAAGCCCTTTCGTCTCTATAAGAAGACGAGAGGGCTATTTTTATTTAGGAGGAATGAACAATGGCAGTACCTTATAATCATAAGGCGGTTGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATAGTAATATGGGATATATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 76636-78093 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMJR01000133.1 Robinsoniella peoriensis isolate 6600698, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 76636 30 100.0 34 .............................. ATTTATTGGTTAATGACAGGAAAAGAAGAAAATA 76700 30 100.0 34 .............................. TTAAGTAAGTGTAAATAAGGGGTTTGAAAAAAAG 76764 30 100.0 36 .............................. CCCAATTTAATGAGTGAGCTTAAGTAAACTAACCGT 76830 30 100.0 36 .............................. TCTAATCGAATTGGTACACATTTATCCCATTCGTTC 76896 30 100.0 36 .............................. TAATTTCCACTTTGGTTGTGTATTCAAACATTTGAT 76962 30 100.0 35 .............................. TACAATTGTTCCAACCCGTTTTTGTTATCTTTCAT 77027 30 100.0 34 .............................. GGTGAATTAATAACGGTAACAGGCTTCGTAATCT 77091 30 100.0 34 .............................. AGCTTAAGCATTCGACAAAAACAGAGCTGTCGGA 77155 30 100.0 34 .............................. ACGGATACATATCATTCGTTGTTTTTGTAATAGT 77219 30 100.0 36 .............................. AATTATTGCAACACGAACAAATATTTCTCATATGGA 77285 30 100.0 35 .............................. TCAATTTTCAATCGTCTCTCTTCTAAATTGAGTTG 77350 30 100.0 34 .............................. TACATTCCAGACAAAAGAAAGACCTCTCTCCTGT 77414 30 100.0 35 .............................. ATGATTGTTTCCATTGAATTGATCTGTATAGTTTG 77479 30 100.0 35 .............................. GGATCTTAAGAATTATACAATCAACGGTGGTAATT 77544 30 100.0 35 .............................. ATCTCAAATCCTGTTAAGTGCGCATCTATCATTTT 77609 30 100.0 34 .............................. CCCTTAATGTGGATGATGCATTGCAGGAGTACTT 77673 30 100.0 34 .............................. TCTACATAATCATGGCAGATTGCATTCAATTTCC 77737 30 100.0 36 .............................. AGTGGATTAAGACATTCCATAAGACGATCCATATGC 77803 30 100.0 35 .............................. TATTGGGATATTTTCTTTTCACTCATGGTCTTCCA 77868 30 100.0 36 .............................. TTATGTGAATCTGTAAGTGCTTTATTAAGTTTATCC 77934 30 96.7 34 .......................G...... ACGCGAATCATGTAAGGATTGCCCAGGCAAAATC 77998 30 96.7 35 ................A............. GATATGGAGTGAATGCAAAGCATGGATTTAGATAT 78063 30 83.3 0 ......C.C..........C....AA.... | A [78073] ========== ====== ====== ====== ============================== ==================================== ================== 23 30 99.0 35 GATTAATATCAATATAGGATATATTGAAAC # Left flank : TTGTATGAAGAATATCTATCTTTATGGTCTGAGGCAGAATTCATCTGTTGGAATGAAACAATATCTTATTTGACACAGTAAGATAATATTATTTACCGGATTTTTTCACTCTATGCAAAGGAGGAAGGACCACATATGAAAATTTATACCAGGCTTTTTCAAAATATTGTGATAATATTTCTAGTCAGTTAAATTTATGCGGGCTTTCCTTAGGGGCAGTGATGGTACTAAATTATAAAAAATACACTTCAAATTGGCAGAGTAATTATAAAAAAGGGGTCAGGGATTGTGAAGCAGATAGTTTTAGAACTTCAAAGAGTAATAAATTTACCAGGCGGTGTATTTGTGTTTTAGGAATAAAGCCTTATTTTATATAGGAAAATGGGGGAGGATGCGGGGATAGTAAAAAATTTTGTCTTGCTTGGTAAAAAATGAGAAAAACCTTGATTTAGTGGGGGTTTTAGGATATAGTGGTAAGAAAGAAGGCGGGAAATGCGTTG # Right flank : CAGATATCCACATGTAGACCGTACCACATAAATTAAAGAATAAATCAACAAAATATTATTCCATACTCTAGTAATTTTTGACAAATACCAGTTCTATAATATAATATTACTGTGAAAAATCACGGATAAAGCACGGAATTAGTGGTAGTTGATTAAATAATACACTATTTTTATAAAATGAGGAATGTACTGTTGTTTAAGTCGCGTATGTACCCGAGTACAGTTCCTTGTCTTTTGGATCAGCTGCGGGTACCGTCTGTTGAAATATGGACCTGCCAACTACCGAACGTTCCCTATTTCCTGGTAGTGTGCTTCAAACAGATAAATTTCTGGAATTACATAATAGAAGAGAGTTTAAATATTATGTTTATGATCTTCCATATCCATGTGAAAAAGATGGAATTTATCAACAGGGTAAGATTTATGTTATGAGAATTCGAACTGTTCGGCAGGAACTTGCAGAATATTTTTCGAATATACTGAGTCATCATTCGTCAAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATATCAATATAGGATATATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 2 87218-88542 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMJR01000133.1 Robinsoniella peoriensis isolate 6600698, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 87218 30 100.0 35 .............................. ATGTTTTCTAAAATGTCTCGATAAGGAGTCAGGCG 87283 30 100.0 36 .............................. AGTCGTTAAAGACTTTGATGAGTTTGAGCAGAAACA 87349 30 96.7 34 ...............T.............. ATTATTAGGAGGTAATCATGGCAGTTCAGAAAGA 87413 30 100.0 34 .............................. AAACCTGATTCTTGTTGGATAACCGACCTTATTA 87477 30 96.7 35 .............................T GCCAGAAAATCAACGGCAGCTGCTGCCGGCGGAAG 87542 30 100.0 34 .............................. AATCTAATTCCGGCAACTTGGCAAGCTGCCCTGA 87606 30 100.0 36 .............................. AAAAGAAGATAGGAAGAACGCCATTATTTACGGAAT 87672 30 100.0 36 .............................. GGGCATCCCAATGTATTCTTCGCTCAAATGTGTGTT 87738 30 100.0 35 .............................. GATAACATCGCATATAAGTCATATATTCCCAGACT 87803 30 96.7 33 .............................A CTATTTTCGATGCATACGACCATTGCACACTCT 87866 30 100.0 34 .............................. CGTTGCACAAGGAAGGCACCAAAAAGTTGTGACA 87930 30 96.7 36 ....T......................... TATTATATACTGGAAATACACCAATAAATGCCATAA 87996 30 100.0 34 .............................. ATTCTTAATGACAGAATAACCATTGTCAATAAGC 88060 30 100.0 35 .............................. TCTCCTATTTTCTTTGTACTTTTTCGCTAATTTTT 88125 30 100.0 35 .............................. AACGCTACAATTTGCCCGGTCACATATTGTGAACC 88190 30 96.7 34 ...........................G.. GGAGTATGTAAAAGAAACGGCTGCCGATGCATTC 88254 30 100.0 36 .............................. TAACGAATGAAACTCTTACCCATTAGGTTGCAGAAA 88320 30 96.7 34 .........................A.... AATGTAGAGTCCTGGTCCGACGTAATACAAAAAT 88384 30 96.7 35 ........T..................... ATTATGGTGAGATATACGTATTCTGATTCTGAATT 88449 30 90.0 34 .................A.C.....A.... TAACAACCGAAGTGATTAGAAGTCTAGCCGCTAA 88513 30 73.3 0 C.......TCC.....A...A....A..T. | ========== ====== ====== ====== ============================== ==================================== ================== 21 30 97.2 35 GATTAATAGTAATATAGGATGTATTGAAAC # Left flank : GTTTATTCCATTCTCGCTTAAGGAGGGAATTTAATGAAAAAACAGCCATCTTATAATTATGCTTTTGTATTTTATGACGTCAATGAAAAACGGGTTCAGAAGGTATTTAAAGTTTGCAAAAAATATTTATCACATTTTCAGTATTCCGTATTTCGTGGAGAAATTACACCTTCTAAGTTGATTGAACTCAGAACAGATATAAATAAGGTCATTGACAAAGAAGAAGATTTTGTATGTATTATTAAATTAATGAATGATAATGTGTTTGGAGAGGAGATTCTGGGAAAGCGTGATGTTGCGACGGGAGAGGATTTAATCTTATAATAATTTACCAGGTGCCTGTATAAGGAAAGTCTGAAAAAGACTGTAGATATAGGAAAAAACAGAGATGTGAAGGATAATGGATGAAAATCATTGGCGCCTGGGAAAATATGTGGAAAGGGTTGATTTTATGGGGGATTTGGGGTATAGTTAAGGGGAAGAATGGTGGAAATGCGTAG # Right flank : CAAATATGTGAATGTACAAGACAAGCCAAAAGCCTCAGTGCGAGCCACACTGAGGCTTTTATAAATAAGGCGCTTCTTTACTGTTCCTTATGGTTATGCGCTTTACATATCATCTGGGTCATTGTTCCCATGGGGCAAAATGAGCACCAGGTACGGGGGCGGTATAAAAGCATTACGACAATGCCGAGGATAGTTGATGTCAACATAATGCTATAGAAGCCAAATGCAAACTGGGCGATCCAGGGAGATGCAAGATTAGCGGTGTAGGCCCAATGCCAGGGTACTTTGATGGTCCATAGCAATTTAATAACCGTATTCAGGCTGGTTGCCCCTGAAAATACCAGATAGGTTGAAAATACCATCTGTATGAACATCACCAAAAAAAAGATTAGGAAACCGTAACGAAACCAGTTGGAATAGATCCATTTTGGGGTGGGTTTATTTCTGGACAATTTGAATTTACTGCCTAATAGGTTCAACAGCTGCCCTCTGCCGCAAAA # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:0, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.97, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATAGTAATATAGGATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 36757-35430 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMJR01000007.1 Robinsoniella peoriensis isolate 6600698, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 36756 30 100.0 36 .............................. TTAGCAACTAAGTCTGACATAACCGAGAGTGAATCT 36690 30 100.0 34 .............................. AATTAAGCGATAGTCTGGCAAAAAAAGAGTCAAC 36626 30 100.0 34 .............................. AGAATATTGAATGTTAAAGAATCGTAGGTAGGGG 36562 30 100.0 35 .............................. GGCACAAGAATATCTTGATTATTTGGATTATGTTA 36497 30 100.0 35 .............................. GCTGTCAAATATTTTATATCAGCTTCTGTCGCTTT 36432 30 100.0 35 .............................. TTGAACTTTCCATTTATTACGGATAAATTCTCTAC 36367 30 100.0 34 .............................. GGAGCTGCGTAGTGTTCTCTATTATGAGCATTTG 36303 30 100.0 33 .............................. TTGAGGAAGTCCCCAGGTGCCAGATGCAAAAGC 36240 30 100.0 37 .............................. TCGACCGACATTCCAATCGGAACCTGAACGGGTTTTT 36173 30 100.0 34 .............................. TAGTGTTCGAAGAATTTCGAAGCAGTCTTAAAGT 36109 30 100.0 34 .............................. GTTAGGTGGTGTCACACCTATTAGAACATGGGTA 36045 30 100.0 36 .............................. AATGTCAGTACCGTGTTGGATATCTCACAAGTATTT 35979 30 100.0 35 .............................. AATTTTTAAAACCTCGACTATGCTGTTTTATTTTC 35914 30 100.0 34 .............................. GAAACTGCAGCATAAAGAATATGGGATACAAATT 35850 30 100.0 34 .............................. TGAATTCACCTACTTTCTCCTTATTTTGGTGCGA 35786 30 100.0 37 .............................. GCCGAACAGCGTGCCGAGTATGATAAATTATGGCAAC 35719 30 100.0 35 .............................. TAGTAATACTTCTTAGGATCCTTCTCTAAGGTCTT 35654 30 100.0 35 .............................. CATGTATAGTGTGCAATTCTATGCAATCATAAAAT 35589 30 96.7 35 ............................G. TTTTGACACGGTTATGTCACTACAATCTGAGTGCG 35524 30 96.7 35 ....................A......... GTTATTCTTATTGAGAAATTGGTTTTAGTAACTTT 35459 30 86.7 0 ......A.......C.....A....A.... | ========== ====== ====== ====== ============================== ===================================== ================== 21 30 99.1 35 GATTAATAGTAATATAGGATGTATTGAAAC # Left flank : AGGCAGGGCTAGGTGTAGGCAGTTAGGAAGCAGTATATGAACTGAAATTTCAGGTGAACATGTATGGCTTCCGCCCAAACCGGAGCTTCTATGTGGCAGTGAAAGAGATGTGCATCAGCATGGTACGAAAACGCATCAATTATGTAGTTGATGCAGATATCCAAGGATACTTTGAGCATATAAGCCATGAGTAGACACTTAAAATTGGTGGATATTATATCCATTACCCATACTTTGTCTGATGAAGAAGTAAGGAGGGAGTGTTGGAATATGGAAAGTACCAGACAAATGAAGCAGGACCAGCACAGGGTAACATTATCTAGAGTAATTTACCAGGCGGTAAAATCGAGAACGTTTAAAATCATTGTATTTTCAACGAAAATAAGGTATTTGTATTAGATTTTGTAAAATTCGATGTCGGCTGGGAAAAAATAAGAAAATCCTTGATTTTATAGGGGAATTGGGATATAGTGGGAAGGAAGAATGTTGAATATTGGTTG # Right flank : AGTTCTTCTACAGTTTTAACAATTCTGTTTCAAGATTAATCATAAAATCATCCACCAATGTAAAATCACAATTAAAAAGAAAAAATGAATTGACGTCTCCCCAATTTTATGGTATAAATAACAAGTCGGTAATTTTACAGAGGGGATTGGTCAAGTGGTATGACAGAAGTCTCCAAAACTTTTAGTGGGAGTTCGATTCTCTCATCCCCTGCTATTACAGAACAAAAATAATCAACCGGAAGGTTGGTTATTTTTTTGTCTAAAAACGAAAATGTGTAAGAGGATGGGAATGTGTGGAAAAGTGAACTTTGTCAACATTTATCGAAAAGCACTGCAAAATCCAATATATTTCTGTAATATTAAATCTGGAATATATGGAACAGATATTGTATAATATTCAAACTGGTGTTTTGCCAGGGAAACGAAAGGAAATTTATAAAGGGGGATTCATTTTTTCATGGAAAGAGATATGACAGTTGGAAGACCGGCGAAGCTTATTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATAGTAATATAGGATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //