Array 1 1-1293 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QDAU01000015.1 Listeria monocytogenes strain ICDC_LM1572 LM1572Scaffold15_1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
         1	    36	 100.0	    30	....................................	ACTTACTGAACAACATTGATTACCACAGTT	
        67	    36	 100.0	    30	....................................	TAATAAACAAGAAATATTACTTCATGAATC	
       133	    36	 100.0	    30	....................................	CACTATCCACTACAGTGATTTGTATTGTGC	
       199	    36	 100.0	    30	....................................	GTAATCCCAATTAACCCCGCAGAGGGTGTA	
       265	    36	 100.0	    30	....................................	TGTCATGGCGAAAGGTAAAACGGTCGATTG	
       331	    36	 100.0	    30	....................................	AGTGTTGGAGACTGCAAGGATTTCCGGATT	
       397	    36	 100.0	    30	....................................	AACCTGCAGGTGCTGTGTTCACGTCAGCAA	
       463	    36	 100.0	    30	....................................	TTGATGAGAATCTATACAGGTACTTAACCG	
       529	    36	 100.0	    30	....................................	TGTTGTCAAAGATGGTAATAAATGGGTGAC	
       595	    36	 100.0	    30	....................................	CATCGAATTGATACTTTTCGAGTGAAGCAA	
       661	    36	 100.0	    30	....................................	GTGGGAAACGTTAAATATTATAAAACAGAT	
       727	    36	 100.0	    30	....................................	GCATCGTACCCCAGTTCATGAAGCGCGGTA	
       793	    36	 100.0	    30	....................................	ACAAAACTCTCTAATTCAATTGCTCCATCA	
       859	    36	 100.0	    30	....................................	TTTATAAAGAATACTTGCGGGGCATAAATG	
       925	    36	 100.0	    30	....................................	GTCTAAACTTGGAATATAACTTAGGTCTTG	
       991	    36	 100.0	    30	....................................	ACTGATGAAAGTATTTCTCCAATGACAAGT	
      1057	    36	 100.0	    30	....................................	TTAAATACGATGGAATTAATCTATCGATGC	
      1123	    36	 100.0	    30	....................................	TCAAAGAGTTTATACCTGTTTTGATTGAGT	
      1189	    36	 100.0	    30	....................................	TAATATTCTTCCCCCCCATCGCTAACAGGG	
      1255	    36	  86.1	     0	.............A.....C.....T.A.......G	|                             	A,A,C [1280,1286,1289]
==========	======	======	======	====================================	==============================	==================
        20	    36	  99.3	    30	GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	                              	       

# Left flank :   |
# Right flank :  GATAAAATGCATCGCAATTACCAAACCATGGTTAAATTTAAAAAGGAGTTAGGCTATCTATATGACACAGTATCACTATCTTGCTTCGAAGTCACTCTTAGAAAATGATGGGGAAAAGTTCCCTCGTCTTTATATTAGACTTCTTAAATTTGAATTTTGATATGAATGTTGACCAAGACACTAATGAATTGTTTTTCTATTCAATTGATTTGAACTCAGCTTGTAAATCTAAGTAAAGGGAACCTGCCGCTGAAAGGTAATGGGCAAAAAAATTGTTACGAGACTAAAAGTTTAAAAATCTTGTATGATTATATTCTAAATACGAGTAAAGATAATGACACGCTTGAACTATATACTGCTTGGAAAAGCGAGGAAGATTTCCTGCTATTGAATAAAACAGAACTGCTGATCTAGAATTTAACTATCGAAAATCTAATTTTAAATGATAGAGAACTATTAGTAATTAAAAAAGAAAACCGATATAACTTTTAGCACCATTC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.30,-0.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//