Array 1 2802279-2797478 **** Predicted by CRISPRDetect 2.4 *** >NC_010995.1 Cellvibrio japonicus Ueda107, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2802278 32 100.0 35 ................................ TGTCGCAGAAAGTTTTTGATAATTCGGACATGAAA 2802211 32 100.0 34 ................................ CTCAAGAGCATCGTGAGGGTTGTCTTCGTAGCAC 2802145 32 100.0 34 ................................ AGCCAATTTGAATTGATTATTCGCGCAGCGGAAG 2802079 32 100.0 33 ................................ TGCCAGCCGGGCCAACAGCCGATGGCCCTACAA 2802014 32 100.0 33 ................................ AGCAAGTTTTTTGTATGTCAAAGCCCCGTTTGT 2801949 32 100.0 35 ................................ TCGGCTATATCGTTCGCCCCACTCACACGCTGGTA 2801882 32 100.0 34 ................................ CCCTGGATGCGATCACTGCTACGCAGAGTCAATG 2801816 32 100.0 34 ................................ AGACTGGCCTCAGCATGTGCGCTGATAATCTCGG 2801750 32 100.0 34 ................................ GTTATTGGGACAAGGCAGGAACAGATGGTGGTGG 2801684 32 100.0 34 ................................ AACGCCTGGCGGTACGATGGTAACTATTCATCCA 2801618 32 100.0 34 ................................ GCGCTCTTGGTATTTGGCTATACAGTAAAGCGGG 2801552 32 100.0 35 ................................ AAAAACTGAAGTACGGACATTAACCACCTGGGAAA 2801485 32 100.0 35 ................................ TGCTATCGTAAAAGTTCTACCTTGCAATGCCGCGC 2801418 32 100.0 34 ................................ TTTATCCATCAGAAGAGCTCTATTAACGGATTTA 2801352 32 100.0 35 ................................ AAGGTCAGGACGACCAACTTCACGCCCAAGATAGT 2801285 32 100.0 35 ................................ AATACTATGGCCATCAATTTCTGCTGTTTGCCTTA 2801218 32 100.0 34 ................................ AATGTTAACAGAACAACAAGTATCGCATTGTTCG 2801152 32 100.0 34 ................................ TGCATCTGTAGCAGCGTCTTTAACTTCAAGAGAA 2801086 32 100.0 34 ................................ AAGCCACCGGTGTGCAACTGTGGCAAGAGCTCCT 2801020 32 100.0 34 ................................ AGCGGGTACTACAACCAGACAGGTAACACGGAAG 2800954 32 100.0 34 ................................ ATCGTGCACAAGAAGTGGTAGCGCGTCCGATCTG 2800888 32 100.0 34 ................................ AAAAGCATTTGCTTGGCGCGAAGGTATGTTTCAG 2800822 32 100.0 35 ................................ AGCCGCACCGGTGACGAGTCAATAGCTGAAGCCGT 2800755 32 100.0 35 ................................ AAGTTCTGCGACCGCAGCAATACCAAGCATTCCGA 2800688 32 100.0 35 ................................ ATGCGATTATCGGCAAAGCGACCGAAGCGGGCGAA 2800621 32 100.0 33 ................................ TCAGAAAGGCTTGGAGTTAGGGCAAACCTAAAG 2800556 32 100.0 33 ................................ TAACGCCAAAAAATCTTTAAGCGATCTTGGTGG 2800491 32 100.0 33 ................................ ACTGCATCGGTAACACTAATATCGATCCCCTTG 2800426 32 100.0 35 ................................ AGTGACCCTATATCACCCTCTGAGCCCGACACCTG 2800359 32 100.0 34 ................................ CGCACAGGGTTTCTGCGGCTGCAGTCTCTACCAG 2800293 32 100.0 33 ................................ TGTATTTCAACAACAACAAAGATCCGCTTGTAA 2800228 32 100.0 34 ................................ ATTAATATTGAAATTGACACCAAGGGATAAGAAA 2800162 32 100.0 34 ................................ TTGCCTCTCTTTAGCTGCGAATCCCTGAACACCA 2800096 32 100.0 34 ................................ ACTTGTCGAGCCCCCACACCATACGCGCATAAAT 2800030 32 100.0 34 ................................ ACCATGAATCAAATGCGTAATGTCATCCAGCCGG 2799964 32 100.0 34 ................................ ATTCTTGTGCCCAGTGGCCGTGTTATGGATACGC 2799898 32 100.0 34 ................................ ATCCAGCAAATAGGTAGCCTCTTTGGGTACATGT 2799832 32 100.0 34 ................................ CCGCTTGCAGTGCAGGAATCAATACACGCTGAAC 2799766 32 100.0 35 ................................ CCTGTGACATCACCAAGTTTTCTCTGGTTAATGTG 2799699 32 100.0 34 ................................ AATGCCCACGCCACCAGGCCAACGGCCACCACAC 2799633 32 100.0 34 ................................ CAGGGATTGGCCAGATCGATAGCCGCGAACAGAT 2799567 32 100.0 34 ................................ AGAATAAACATACCCTACCCCTTAAACACTTTTG 2799501 32 100.0 34 ................................ TGCCATGTCTGCCGCTGAGCGTAAACGCGCACAA 2799435 32 100.0 35 ................................ AGGAGGTACGTCATCGATCATGTAGAGGAATTGCC 2799368 32 100.0 34 ................................ TTGTTGTTGATGTTCTGGTTGCCATCGCTAAAGT 2799302 32 100.0 33 ................................ GGTCTACCTGGAGACAGGCACGGCGGATTATAA 2799237 32 100.0 34 ................................ CAGGTGAGTGCAGACGGCTCACCTGGGTAGCGCA 2799171 32 100.0 34 ................................ TGCATATCAGTCACGCGTAGAATCATTAAAGCGC 2799105 32 100.0 34 ................................ ACCGGTATATCTGTCGGTGCGGTATTAACCCGAA 2799039 32 100.0 35 ................................ TTCATGTATGGGTCGGAGTAAATCGAAATTGGATA 2798972 32 100.0 35 ................................ ACAGCTTTTGCAGCATTTGCCAGCGGCTTGATACC 2798905 32 100.0 35 ................................ AGGCGTTAATTGATTATTGGCAGCCGCCATGATTG 2798838 32 100.0 34 ................................ GTAATAAAAACGACTACCCGACAGTGATACGGTT 2798772 32 100.0 35 ................................ CTACAGGTCGAGTAGTCTATAAAGCGCGCCAAGGG 2798705 32 100.0 34 ................................ CGGCTAATTTTGCCGAGGGCAAAAAAGCGCAGCG 2798639 32 100.0 34 ................................ GACTCGGCGAGATGTTAACCTATCTATTGATCGA 2798573 32 100.0 34 ................................ ATAGGTGGTGTTGCTCTCTGCCCTGAATTTAATG 2798507 32 100.0 34 ................................ AGGGAGCAAAGTGGCCCTGGTAAAGCATCAAGAA 2798441 32 100.0 35 ................................ CTGTGGATGAAAGCTGAAAGCACCGGATGTTGTCC 2798374 32 100.0 34 ................................ AGATATTCGGTGACAAACGTGGATTGCTTGGCGG 2798308 32 100.0 34 ................................ TCCACGCAAATTTGTTTTGCGTTGCAGTCTAAAA 2798242 32 100.0 36 ................................ GAGAACTACACCCGTACAGCGCAGATCCTCGCGGAC 2798174 32 100.0 35 ................................ TCGTTCCCGCAGTCGCATCTAGCCCACCACAGGTG 2798107 32 100.0 34 ................................ TCAACAATTGTTGGTACCGATGCCGAGCGGGTGC 2798041 32 100.0 34 ................................ ATATAACACCTCAAAGGTTGGCAGCTGGTTATGC 2797975 32 100.0 34 ................................ AGCCAGCATTGCCCCTGTACGACTACCAGCGCCG 2797909 32 100.0 34 ................................ TGCTCAAGGGTAAAGGTTCGCTTACGCGGCATCG 2797843 32 100.0 34 ................................ ACTCAATGAGCATCTGCACCAGCAGTTAAACCCA 2797777 32 100.0 35 ................................ CGCTCACGGGGTCCCGCGCCCAACGGCGCTCCCGG 2797710 32 100.0 33 ................................ AAAACCGGCCAGGAAGAAACCATCTGCCGCTGC 2797645 32 100.0 36 ................................ GAGGGTATCGAGCAGAAAGCCCGGTCGTTGATTACA 2797577 32 100.0 34 ................................ TTGTACTGCGCGAGCCGTGCGAGCCAGTTTCAGT 2797511 32 87.5 0 .........................G..GT.T | T,A [2797482,2797484] ========== ====== ====== ====== ================================ ==================================== ================== 73 32 99.8 34 GTCGCGCTCTTCGCGAGCGCGTGGATTGAAAC # Left flank : TACTCCATACCTCGTAAAATAGGAGGGATTGTGCTGGTATTAATAACCTACGATGTGAGTGTAACCTCTCCAGGAGGTAGTCGCCGCCTGCGTAATATTGCGAAAACATGCCTGGATTACGGTGTTAGGGTTCAGAATTCTGTTTTTGAATGCGAAGTTGATCCAGCTCAGTTCGTCAACTTAAAAAATAGTCTTGTGGAAACTTTTGACCCTAACGAAGATAGTCTACGGTTTTATTTCCTAGGAAAAAAGGGACATCAAAAGATAGAACATATTGGTACGAAATTTGTACAAGACCCTCTCCGCACCCCTCTTATTCTTTAGTCCGCTAATCTATGGTTCTCACAATTTTCCCAGTAGATTAGCGGACTCTTAACTTGTTGATTTACAAATATAAATTTAATTCAATCTGATTTGATTTAATCCAATCAGAAAATATATCCCTGGTTAGCGGAATTTTTCAGTTTTCTTTTTATTTACCAATAGGTTACCTTAATGCA # Right flank : TTAATTGGCAGCTATTACCCTATCCCTCTCCTGCTCTCTTACAAACTCCTCCCGCAATTCCCTGGCTGCTTTCACCATATTCACCAGCGCAGCTTCTGTTTCTGGCCAGCGGCGGGTTTTTAGGCCGCAGTCGGGGTTTACCCAGAGGCGTTCTGTGGGGAGCTGGCGCGCGGCGCGTTTGATGAGTTGCACCATGCTGTTGACGTCGGGGACGTTGGGTGAGTGGATGTCGTATACGCCTGGGCCTATGTCGTTGGGGTAGTTGAATTGTTCGAAAGCTTGCAGCAGTTCGCCGTCGGAGCGCGAGGTTTCGATGGTGATGACATCGGCGTCCAGGGCGGCTATGGCCTGGATAATATCGTTGAATTCCGAGTAGCACATGTGGGTATGGATTTGGGTTTCATCCTGTACGCCGCTGGCGGTGATGCGGAATGCTTTGACGGCCCAATCGAGATAGGCGCGGCGATCTTTGTCGCGCAGCGGCAGACCCTCGCGAATCG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCTTCGCGAGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCTCTTCACGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.60,-5.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //