Array 1 30583-31992 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNXY01000011.1 Legionella drozanskii LLAP-1 strain ATCC 700990 Ldro_ctg011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 30583 28 100.0 32 ............................ AATATTATCAAGATTTTATGGAGAAAGCAGAT 30643 28 100.0 32 ............................ TGTTAATGAGCTAATTGAAGATGACTTTTTAC 30703 28 100.0 33 ............................ TTTTATAGTGTCAAATTACGGACCCGCTTGCTC 30764 28 100.0 32 ............................ AGGCGAGAAGAAGTACCCAATGCCTGATAAAA 30824 28 100.0 32 ............................ AACACCCAAGGCTTATTAGCTTATGATAAAGA 30884 28 100.0 32 ............................ CTTAAAATCATCTAACTTCATGCGCCGCCAAT 30944 28 100.0 32 ............................ TTGACCCAACATATGCCCCACATTACGGCCAA 31004 28 100.0 32 ............................ TACTAATAATTTGTAATCGCAGCGCTATGAGT 31064 28 100.0 32 ............................ CGAAAGCGATAAAGTAGTAATCGACTCAGTTA 31124 28 100.0 32 ............................ AAAGGCTAATATAGGATTAAGACCTGCTGCCT 31184 28 100.0 32 ............................ ACGCTGCCAAGCAGTCGAAGACATAATAGATT 31244 28 100.0 32 ............................ AATAATATGACCATGCTCTGTAAACGACTTAG 31304 28 100.0 32 ............................ GGTACTGTTATTCCCGGACAAACCGGAGCTCC 31364 28 100.0 32 ............................ TGTGAAGATTTATGACATTGCTAGTTGCAGGG 31424 28 100.0 32 ............................ TTTAAATTATCTCACTTGTTCGGGTCAATCGT 31484 28 96.4 32 ...........................G GATAGGTTTTGGAGTTTTAGAGCCGGTTTTAG 31544 28 100.0 32 ............................ ATTGCAAGGTCATCGCTTGAAAAAGTTAGGGT 31604 28 100.0 33 ............................ CAAGAGGAAATTGCAGGCCATCTAGGTATATGC 31665 28 100.0 32 ............................ GCGAAACGGTCGGAATACGTATTTGTTGCAAT 31725 28 100.0 32 ............................ CAACAACCCCGTTATTGCGAGCCTGGCATGCC 31785 28 100.0 32 ............................ TGTTAACTTCTCGAATTGCTTCCCGGCGCAAA 31845 28 100.0 32 ............................ TTTACATCATATGTCAATAAATGTTATTTATT 31905 28 100.0 32 ............................ AATTAAACATATTTTACTTCTTTTTGCGTCGT G [31920] 31966 27 96.4 0 ........................-... | ========== ====== ====== ====== ============================ ================================= ================== 24 28 99.7 32 GTTAACTGCCGTATAGGCAGCTTAGAAA # Left flank : TGCTCGAGAAATTTAATGCAATAAAATGGTTAAATAATTTCTCTGATTATGCTCACATAACTGGAGCTCGTGATGTCCCGGGTAATATAACCAGCTATGTTCGTTTCAAACGAAAGCAATCGAAGTCTAATACTGAACGCATAGCTCGAAGAAAGGCAAAGCGCGAAGGGATTGATTTGGAGAGTGCGATGGGATTATTAAAAAATCATAAAGAATCATTAATACGTGCGCCATTTATAAAAATTTCGAGCCTAAGCTCCAAAAACACATTTAAGCTCTTTATTTATAAAGAACCCTCTGAGGAACTTATAAATAATGCATTCAGTTGTTATGGTTTAAGTTCTGTATCAACGCTACCTGACTTTTAACCTTTATTTTTGCTGTTCTTTAAAAATTTATTTAAATCAATAGGTTGCGATCATATAAAATATCAATGGTTACACATCGATATCTTATACTAGCTTATTGTTTATTAAATTGATTTTAAGTGTGAAATTTGG # Right flank : CAGGAAGATGATTACATTAAGTCGCTATAATGAAAAATATTATCCATCTTTATTATCGTTGCAATAAAATTTATCACAGCATTCTTAAAATGAGCACATCATGATATGATTTACTCCTCATAAATTTTAGAAATTCTGTAATCTGGCTCAATATATGAAAGCAACCACCCCAATTTTCCTCCTATCGTTATTTGTTATATTTCTTTTTTTCCTTTTCTCAACCGTTTCTACTATTCCAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTAACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //