Array 1 6735-7100 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KQ960929.1 Megasphaera hutchinsoni strain KA00182 Scaffold20, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      6735	    36	 100.0	    30	....................................	CAAGACTTATCTAAGTATTTATTTTACGGG	
      6801	    36	 100.0	    30	....................................	GGAGCGGATCCGGGTGCGGAGCCTTGCCGC	
      6867	    36	 100.0	    30	....................................	GCTTCCGGAAGCAAATAGCCGCCTTTTTCC	
      6933	    36	 100.0	    30	....................................	AGCGTTTTTCCCTTGAATCGTGATTGTTAT	
      6999	    36	 100.0	    30	....................................	TTTGCCCAGTACCCAATAAGCCACGACACA	
      7065	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         6	    36	 100.0	    30	GTTTGAGAGTAATGTAATTCTATAAGTGTCTAAAAC	                              	       

# Left flank :   TACATGCCTATTTGACGAGTATTGCCGAAGAGGAATCGGAGCTGCTGTATGAAATTAATGATAAACTTCGCCGCTTATATACTGAGATTACCTTGCAGGCACCGGTTGAGGTCGGGTATAAAGCGGCCCTTTCTGCACAAGATTTGATAAAGGCGGGAGATTTTAAATTTGAATGGGGAGAGACGGAACTGTTAGAAAGGCTCGTGACGTATTTGGATATTATTTGTGATTTGTTAAAGAGTAAGCTGATTGTGTTGGTTAATGTCCGAAAATATATGACGGAAGAGGAATTAAAATTAGTATATGAACATTGTATACGTAAAAAGATACCCATTTTTTGTATTGAATCGGGATATACCTGTCATAGTGTTGATGAGTTGTTAGAAAAAGTTTATACTATAGATAAGGATTTATGTTTTATTTATTAAGGTATTGTGGCATGAGTAGAATTACATCGCGTGTAATGGTGAAAAAATACTTTTGGCGTCAACGTTATTGGG
# Right flank :  CTACATAAGAGAATATATGATAAAATCGACGGTTTGAGAGTAATGTAATTCTATAAGTGTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGAGTAATGTAATTCTATAAGTGTCTAAAACTCCCCTTTGCCGTCATGCTCATACAAGTCAGTTTGAGAGTAATGTAATTCTATAAGTGTCTAAAACCTGTCGACTCCGGATTTTGTGAGAATTTGAGTTTGAGAGTAATGTAATTCTATAAGTGTCTAAAACATGGCTGGACGATACGCATACGGACAGCGCGTTTGAGAGTAATGTAATTCTATAAGTGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGTAATG

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTGAGAGTAATGTAATTCTATAAGTGTCTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-1.90,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.37,0.27   Confidence: LOW] 

# Array family : NA
//