Array 1 40504-42333 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAATK010000138.1 Enterobacter cloacae strain 1476 1476_contig138, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 40504 28 100.0 33 ............................ AGTTATCCCAAACAAGGCGATTTGGCACCGAGA 40565 28 100.0 32 ............................ TACAGCCTCACCCCGTCAGGGAACGACCAGGC 40625 28 100.0 32 ............................ ACCCCGCACGCTGCGCCGCTCCTTGACCCTCC 40685 28 100.0 32 ............................ AGTAAAAATCATATTTCGTCTGGCGGGAGAAC 40745 28 100.0 32 ............................ GCTGCACCGTATCTACCTCAGCCCCCACCAAA 40805 28 100.0 32 ............................ ATGCTGGAAAGGAAGGCTGGCAGAAATGCAGT 40865 28 100.0 32 ............................ TGAGTCGCGATTCAGTTCTCGGGAGAACATGA 40925 28 100.0 32 ............................ AGCGAGGTGTTCACGTTGGCGTATGCACGCTG 40985 28 100.0 32 ............................ GATAAACAGATGGAGCACCGGTAGCCGGGTGA 41045 28 100.0 32 ............................ AACAATGCCGGAGAGCTTGCTTATGAGGCTAC 41105 28 100.0 33 ............................ CACGCGGCGAGGTGAGTCAGTAATACCGCCGCT 41166 28 100.0 32 ............................ GTGTCAGCCTGGGCGGAAAGTGGCTGTGTGCC 41226 28 100.0 32 ............................ GCGCAGCTCCGGCAACCGGGCGCCGCGCCATC 41286 28 100.0 32 ............................ GGAAGCGCACTCACCAGTTTGATTTAGCGACA 41346 28 100.0 32 ............................ GCAAATACAAGCACCGCTGGAAGTGTGCGCAG 41406 28 100.0 32 ............................ TGACAATATCCAGATGCTTGCCAGCACCTACG 41466 28 100.0 32 ............................ CTGCCCTGACATTGCACCGACCTGCTCAAGGT 41526 28 100.0 32 ............................ ATCGCCGCCGCTTCGAGCCGCTGCGCGACGAG 41586 28 100.0 32 ............................ GTTAGCGGATTCGGCGAGGGGTTACATGTTGC 41646 28 100.0 32 ............................ ACATGCGCCGGTTGCGCGCCGCGGTACCCGAC 41706 28 100.0 32 ............................ TGTACGCCGTCATAACCGCCTGGAAGAGTGGC 41766 28 100.0 32 ............................ ACCGCCCGCGCTGACACGAAGTACGGATTCAC 41826 28 100.0 32 ............................ GTTCTCGCCGCGCGAGTGCAGCGCCTGACGGT 41886 28 96.4 32 .........A.................. AGCGGAAGCCAGTCGGGATAGTCGATAATTGG 41946 28 100.0 32 ............................ TGATTCGTTCCAGTCATATACCACGTTCACTT 42006 28 100.0 32 ............................ TCAGGAACTATCAAGACTTTGGCAATCAAGCT 42066 28 100.0 32 ............................ TTAATTGCAGAGCGAAGCTTACGCGCCGCAGC 42126 28 100.0 32 ............................ TACCATTGTCGCATTCGTGGTTTTGTTAATGG 42186 28 100.0 32 ............................ TGTCATTACTTACGTCGTAGCATGGAGTAACC 42246 28 100.0 32 ............................ GGGCAAAGACAGCTGCGCTAGCTCTGTGCGGA 42306 28 85.7 0 .........T..G..A.T.......... | ========== ====== ====== ====== ============================ ================================= ================== 31 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGATTGCAAATCCCTCCCACAAACGCAGCCCGTATGCCATATCTGGAGGAAGTGAAAACCGGCCTCACAGAATCAATGCGTGATTTTCAGGTAGTGGAATTTGAGGACGACGCGGAGCAACCGCGACAAAAAGAGTGGTTGCTGGAGGATACCGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGTTGCTGGTGTCGCATGTTGACCGCGATATGTTGCCGCACCTGACGGGACTGCTTCATGACATTACGCATTCAATGGCGGCAGATGTCTTTGCACCTCAACATTCAGAAAAGATAATGCACATTATTTCCTGAGTGCGCTCTGAGGCATCGGGGAAGCTCCTCTGACGCCAATGGTTTAACCCTTTTTTTTGATGTGCACGTAATTCATTGATTTATATGGTTCGGATTTACGTTTCTGAAAAAAAGGTTTTATGCGCAAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : AAATGAACAACATCGACAAACAGGCGCTACACGGTTCACTGCCGCACAGGCAGTACAATTAAAACCAATCCTCTGAAAGATTCATCCCACCTATAAAAAGTTAATACTATCAACACCACACTCTCTATTTTTTTACAATAAATAAAAAATAATTCACGAACAAATTATATTCTGGCGAATATATTATTTGTAAAAATAATATTTCAATGCAAAAAAGTAATTCTTCGCTAAATTATCACTGCAATTACTATTCGTTTGATATCCATCACATTTGCTTGTGGCTTATTTTCGATAACATACCGCACATTCAACACATTGAAATAAAAGCCCTCGCCATGTCCGTCAACAGCATTACTCCAACAGATTTAAAAACTATTCTCCATTCTAAGCGCGCCAATATCTATTACCTGGAAAAATGTCGTATTCAGGTGAATGGTGGGCGCGTTGAATATGTCACTCAGGAAGGCAAAGAATCGTTTTACTGGAATATTCCCATCGCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //