Array 1 240572-239824 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUEZ01000002.1 Salinivibrio sp. ML198 contig-100_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 240571 28 100.0 32 ............................ GAAATCCTGGAGTTACAATTTTTGGTTACTGT 240511 28 100.0 32 ............................ TGTTCGTCATCGTGCACACCTGCGGTCTTACG 240451 28 100.0 32 ............................ GTGCTGTGTGTGCATCACGCCGGTTTCTTTCT 240391 28 100.0 32 ............................ ACTTGGCCAGCGGGGCCAGGTTGGTGCCCTCC 240331 28 100.0 32 ............................ TATGAAATAGCGTTGCCACAGTATCAACGCGG 240271 28 96.4 32 ..................G......... ATGCGATGCAAGCGCAAGCCGTGCAAAGCTCG 240211 28 100.0 32 ............................ TCGCGATGGTGATGTATCCATTCAGTGGATGA 240151 28 100.0 32 ............................ CGACGAAACCACAGCAAAAGCTGGCAGCGTGG 240091 28 96.4 32 ..........A................. TATGACAAGGGTAACATAAAGGAAACTAACCC 240031 28 100.0 32 ............................ GCACGGCTAATTGATACCCCCCCGAGTACGCT 239971 28 100.0 32 ............................ AACAACGCACTTTAAAATCAATTTTGAATCAC 239911 28 100.0 32 ............................ TTTAGTGGGGTTCGAGCGCTCACTGTTCAGAA 239851 28 85.7 0 .....................G...GTG | ========== ====== ====== ====== ============================ ================================ ================== 13 28 98.3 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GTGCAAGACTATGCCTACTTTAAACGCTGGAACTACAAATCGCCGCAGCGACTGTATAAAAATGTCGATCGGCGTGCGGCCGCGATTGCCAGCAAAAATGGTTACGATGAGGAGGAAGTAAAGCGTCGTTTGTTGGCAAACATTAAAACGGACGACAAACGCTGGTCCCTGCCTTTTATTCAAGTGACCAGCCTGTCGAGCCAAAAACGAGCGGGGCAGCCAAATACCGAGTTCGCCTTGTATATCGAGCGGGAACTCACCAAACAGCCGCCCAATAATGGCCAACCATTCACCTGTTATGGGTTAAGCAGACGAGAGCCCGACCAGCAATGTGCGGTGCCGTGTTTTTGAGGGGGCAACCCCTCTTTACCCCTTCTTTTTGGCTCTTTAAAAATATACGGGAAATACAGTCAGTTACAGCAGGTGCTTTTTAACAAGGGTAAAAGACGATTTTTATCCTAACAGCCTGTTGTACCTGACGATTGTTAGGTTATTCTATT # Right flank : ACACAAGCCCCAGCACTATGTTGGATAGGGGACATTGCCAACGGGCGCCTGTCACGATCGAGTTTTATCGTTGGCGCCGATGTCGGAGGCGCGCAGTCCACTTGGGTAACAGATGGCTGACATTGCACTGGCGCTTGTCCGACCTACGCACAGGCAGCGACGGTGACACAAGCCCCAGCACTATGTTGGATAGGGGACATTGCCAACGGGTGCGCGTCGGCCAGGTACCTATAACTCACATCATACTGGCGCTTGTCGACCTACGTGAACGTTAACGTCGGTGGTGCCATTGGCGATGCTGCCTGTCTGGGTTTTTCATTGAAATGACTAGTTTAATGTATCTATGAGCCACTTAACTTTATGGCCCTACATTAATCGTTGCGTTTATTTTTATCGAGTAATCAAAAACTAATTGATATCGAGACTTTTCCTGTCCAGCTTTTTTTAATTGATGGCGAGAATCTATTCTACGATCAAACGGTAGTGGCATTTTGGTCGAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 252580-251365 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUEZ01000002.1 Salinivibrio sp. ML198 contig-100_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================================================================== ================== 252579 28 100.0 32 ............................ GCCCAGGAGAAGGGCCGCGAGTTCACCGACTT 252519 28 100.0 32 ............................ TGCGGCTTGCGGTCGTCGGTCAACTTGGCCGT 252459 28 100.0 32 ............................ TGTGGCCGCTGTGTGGTCGCAATGACTTGGAT 252399 28 100.0 32 ............................ AACCCGCTGCGCGTATCGGCCACCACTGCGCC 252339 28 100.0 32 ............................ TTCGGCGACATTACGCGGCGGGACGACTTAAA 252279 28 100.0 32 ............................ ATTCGAAAAGCTGCTGATCTGTTTTACCCTGC 252219 28 100.0 32 ............................ AGACAAAGACAAAAAAGTATCGGCGCGTTGTT 252159 28 100.0 32 ............................ CAGATGAAAAAACGGGGAGGCTTGCCTCCCCT 252099 28 100.0 32 ............................ ATGATGAACAAAATCGCAATGCGCATCAGCGC 252039 28 100.0 33 ............................ GCGAACATGGTGGTGCCGGTGCCGCAGCTGCAT 251978 28 100.0 32 ............................ CCGATTAAAAGAGCCCATGTAACGCATCAATT 251918 28 85.7 136 .....................G...GTG ACACAAGCCCCAGCACTATGTTGGATAGGGGACATTGCCAACGGGCGCCTGTCACGATCGAGGTTAATCGTTGGCGCCGATGTCGGAGGCGCGCAGTCCGCTTGGGTAATAGATGGCTGACATTTCACTGGCGCTT 251754 28 85.7 32 ..C...CTA................... CTGCGGATCTGCATCCACCAAAATCACATCTG G [251750] 251693 28 100.0 33 ............................ ACTTGCGCTAATGTCGTGTTATCCCAACTGGAT 251632 28 100.0 32 ............................ ATATGCTCGTTGGGCGAGTAGCGGCCATAGTT 251572 28 100.0 32 ............................ ATGATGTACACCGCGCCCTGACATTCCGTGGT 251512 28 100.0 32 ............................ TGTCTCGCTCGGTGATGGGGGTAGCGAATTAC 251452 28 96.4 32 .............C.............. TTCAGTCGCAGCGTAGTACCGTGTGATGTTCG 251392 28 82.1 0 .............C.......G...GTG | ========== ====== ====== ====== ============================ ======================================================================================================================================== ================== 19 28 97.4 38 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TGGACGATCTGTTACCCCGACCGCATGTTGCCGCGTTTAGCACCGCTTTATGATGTGGTCTTTACGCAGCCTTATATTGAATATGACAACATTGCGTTGAAAATGGCGAAAAGCAAGCGTTGGTATGATATTGGTTTGAGCCATTTCGAACGCTGGTCGCAAGATGTGGGTGTGCCGTGGCAAATGATCAAACCGCACCTATTGGATACGATCAACCTGGCGCGAAATATGTGGCCAAATCAACTTAAGCAATTACCGATGTTAACGGAGCACAAAGCGATGCTACGTGATCATTGGAAAGCCCTGCACGAGGACTTCACCATCGGTTCATGATCCAGCCAAACCGGGCGCTAAATCGGCGCCTTCTTACCCTTATTTTTTGGCTATTTAAAAATAAACAACAAATACAGATAGTTACGGAATCCCCTTTTAAACAAGGGTAAAAGGCCATTTTTATCCTAACAGCCTGTTGTCACTGACGATTATTAAGCTATTCTATT # Right flank : ACACAAGCCCCAACACTATGTTGGATAGCGGACATTGCCAACGGGCGCCTGTCACGATCGAGGTTAATCGTTGGCCTTAATGTCGGAGGCGCGCAGTCCGCTTGGGTAATACATGACAGACATCGCACTGGCGCTTGTCCGACCTACACACCATTTTAATATCGGCGGTGCCATTGGCGTACATTGGTTATCGGAATAGCCACTTTTGGCCCGATAATACCATTGGCGTAGGTGACACAAGCCCCAGCACGGTGTTGGATAGATGCACATTGCCGACGGGCGCCTGTCACGATCGAGGTTAATCGTTGGCCTCAATGTCGGAGGCGCCAGTTGCACTGCGCGCGGTGCAAATCACACCTAGCTTGTACGATCGAGTTAGCGCTTCTCCGACATACGCACAGGCAGCTTAGAAAGGATTGAATGAGAAGTCTTATGTGTGCTGCTATATACCTAACGTTGTTCGGCTGAATCAATATGAGTCAAAAAGTTGGGAGTCACTT # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:-0.51, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1065-32 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUEZ01000014.1 Salinivibrio sp. ML198 contig-100_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================================================================== ================== 1064 28 100.0 32 ............................ TCGCTGAAAGGCATCCTCGGCCCTGGCGCCGA 1004 28 100.0 32 ............................ TTGCGCACTTTGCCTGCGACAATCGGGTCGAT 944 28 100.0 32 ............................ TTTCGCCATTTTCTGGACCATCTGCCCCGCGT 884 28 100.0 32 ............................ TAGCGTCAAAATACGAATATGTCGTCGTTGAT 824 28 100.0 32 ............................ CCTCCCCCTACTGTGCACGTCAGGAAACAAAC 764 28 100.0 32 ............................ GTGAGCCTCAGTGTCGTGTAGTAGCTGGACAT 704 28 100.0 32 ............................ TAGACAATCAGTGTATTTTTACTCGGTTGGTA 644 28 100.0 32 ............................ TATAGTTAGAGAAAGTAACTCGTTTGCTCGAT 584 28 100.0 32 ............................ TGGCGTTGTCGACCTGGCCACCGCTTCCGGCC 524 28 100.0 32 ............................ AGACGCAGACAATGGTGACGCGTCAAGATATG 464 28 100.0 32 ............................ AAGCGGCGACCGGCTCGCGCCAGCCGTACATG 404 28 100.0 32 ............................ CGATGCAATCATCCGGGTGTTTTCCATTTAGC 344 28 100.0 32 ............................ GTTTGCGCTTGCTCAATATGACATTGTTCATG 284 28 100.0 32 ............................ TTGGCGTAGTTGTTTTGCTTGTAGTACTCCAA 224 28 85.7 136 .....................G...GTG ACACAAGCCCCAGCACTATGTTGGATAGGGGACATTGCTAACGGGCGCCTATCACGATCGAGGTTAATCGTTGGCGCCGATGTCGGAGGCGCGCAGTCCGCTTGGATAATAGATGGCTGACATTGCACTGGCGCTT 60 28 71.4 0 ..C...CTA............G...GTG | G [53] ========== ====== ====== ====== ============================ ======================================================================================================================================== ================== 16 28 97.3 39 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CACTTATCGTCAATATGGTCACTTTTTGGCGGCTTTAAACTTGTATTGTGTCTTACAATGGCTACGCACCACGCTCCTGGAACGCAGGGCTGTGTGCTTGGTTTTGCGACCACGTGTACGCGTACGCCATACTTTGAAACTACGCGGTTTTAATTCACGTCGCATTAAAGCAATCACATCATCTTGGCGTAGCCCATAGAGTGCTTCAATCGCCTCAAACGGGGTCCTATCTTCCCACGCCATTTCAATGATCCGGTCTAAGTCACCAGGCTCAGTCAGTCGCATAGTCTCCTCCTCGCATTGGACTAATAATTACGTATACGTTGAGCAACGCGGATCAATAAGTGGGGATGCCTAAACCCCTTATGACCCTTATTTTTTGACTTTTTAAAAATAAACAATAAATACAGCTAGTTAAGAAAGGCCATTTTAAACAAGGGTAAAAGGCCATTTTTATCCTAACGGCCTGTTGTTCCGAGCTATTATTACGTTATTCTATT # Right flank : GACACAAGCCCCAGCACTATGTTGGATAGGAG # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.62, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //