Array 1 39116-38430 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHKK010000024.1 Sulfurospirillum sp. T05 24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 39115 30 100.0 36 .............................. TTTGAAAAGGTAGTTTACGAATTTGTTTAATAAGAC 39049 30 100.0 37 .............................. CAAATACTCCCATCTTTGGTTGCTTTTGCAAAAAGGT 38982 30 100.0 34 .............................. CCAAACCAATCAAACATGCCTCCCCATGCTCCCA 38918 30 100.0 37 .............................. AACTTTGCAAAGGGGAGCTTCACTTTTCCCGTCAAAA 38851 30 100.0 36 .............................. TGCCGATTTTATGCTGTGACTCTTGAATGTTTGTGC 38785 30 100.0 36 .............................. AGTGGTGTGGACGTTGTTGGTTTTTTCTTTTGTAAA 38719 30 100.0 36 .............................. ACTCTTATTACTTCTTATATAAATTCTATTGGTAAT 38653 30 100.0 36 .............................. ATTTTGAAAAAGTTTCAAACTCTAAAAAGTTAGATT 38587 30 100.0 34 .............................. TGGAAGAAGTCGTCTTTAAAATCCCTTGTGATAG 38523 30 100.0 36 .............................. CTTACTCCTTTACATGTAAAAGTTCTGGGTTTTCGT 38457 28 93.3 0 .....--....................... | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 99.4 36 CTAGAACCGACACAAGCGTTGTATTGAAAT # Left flank : | # Right flank : TCTGCGGTTTATGGCAGATACCACGCGACGGCTTAGCTAGAACCGACACAAGCGCCGATAAATAAAGGTGTGCGTGGACAAGCCAATTATGCCGTTGCGCTATTGGAGTAAGCAGTGGGCATCATTTGCAGTAGATTTAGTTAAACGTCACCGAAACATACCCCACGACACTGCTCGCATCCCCGCTGCGCTCAAAACTGGTGCGATACTCTAGCACGTTGGGCGTGAGCGGGTAAGACGCGGCGACTTCCACGAGGGCTTTCACTCCCGTGATGCCACACGCTTCGTGCCCCTCCAATTCCTTTACATGTAAGGCTTTGATGGCCTCGATGCACGCGTTATCCTTCTCTTTTGCCTGCGCAAGCGGGTAAAAATGGCTCAAATCCGTACTGATGACCACCAAGGTTTCTGGCGCGTCAAGGCAGAGGCGCACAAGCCCTGCAAGGTTTTCGTGCGAAAGCGTGCCATAGACGATTTCCACGACACTCGCTTGCGGGAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTAGAACCGACACAAGCGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.90,-2.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 3638-4218 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHKK010000045.1 Sulfurospirillum sp. T05 45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 3638 35 100.0 33 ................................... GCTGGTAGTCTGCTTGAAATGACCAAAACTGCC 3706 35 100.0 34 ................................... TGCATTAAGTATTCATTGCTTGTGGCAAACTCGA 3775 35 100.0 31 ................................... CCATTTGAAGCGCAATACTCCCCGCCGACAT 3841 35 100.0 31 ................................... ATAAGTATAGATGTGTAAAAAGATGTATTTA 3907 35 100.0 36 ................................... AGAAGGGGTCACCTTCTTTAATCTGGTGATGGTCGA 3978 35 100.0 34 ................................... TGATTCAAAACCAGAAGTTTCTTAGTGGCGTTTT 4047 35 100.0 34 ................................... GCGACGTGGTTTTCCCCATTGATTTTTTTGATAA 4116 35 100.0 33 ................................... ATAAGTTCGGCCTCATACTCTTCTTGCTCACGA 4184 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ==================================== ================== 9 35 100.0 33 CTTTACATGTAGACCCGATTTAAGGGGATTGAAAC # Left flank : CATAGACGCAAGGGGTGTAATCGTGGCGATGTATCAGCGGGTTGGCTCAGTATGAACTCCTGTTTGGTCTGTTATGATATAGCCGACGAAAAGCGTCTGAGTAAGGTGGCAAAATACCTCGAATCCGAAGGGATTCGCATTCAATATAGTGTTTTTTTGATTTTGGAAATGTCGCCACAACGCATGGATGAAATGTGTGCAAGGCTTAGCTTGCTCATCGACCCAGAGGTGGATGACGTGAGGATTTATGAAGTCATTCATAGTGGCGTTAGGCTTGGCACGGCGTTGGATTTGGACAATCCGCTCGTGCTTCTTTAGGCAAAATCTAAGCTAGAGGAGGTTAGAATGGCGTCTTTAAACCAAAAGTTCTCAGTTTCGCTTCAGAAACAAAAGAGCCTATTTTGGGCATTTGAAAGCCCTTTGGGTTTAAAAAGAGCTGAAATTCATACTTATCAGTTTCACTTAAGAAACAAAACGCCGTTGTAAAGGGGCGATGAAGC # Right flank : CTAACTTCCACTCCGTCATTGTGTTTTCCGTTTACTTTACATGTAGACCCGATTTCTCGAAGAGAGTGATTTGCTTTGCAAACCGCTTCGCTTCACAAGAAGGGGATTGAAACGGCGGAGTTCAATTTTCTCCACCACAGAGACTTCCTTTACATGTAGACCCGATTTCTCGAAGAGAGTGATTTGCTTTGCAAGCCGCTTCGCTTCACAACTGGCACTAACTCCACTTTCTTGTTGTAGAATAGATAATATTTTAGCTATAATTGTGTAATTAAAATATTTAGGGATAATATGTTAGCTATTAAACTAAGCACACCACACGCTATGATGCGAACGATTAAAGAGCGGTTTAAAACTAGAAGGTTAGAGCGAAATCTCACACAGGAAGGATTGGCAAATAAAAGCGGCGTAAGTCTTGGCAGTGTGAAAAGGTTTGAAAACAGTGGCCAAATATCTTTAGAATCGCTTTTGAAACTCGCGGTTATTCTTGATTGTCTTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACATGTAGACCCGATTTAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA //