Array 1 2327801-2332861 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025096.1 Spirosoma pollinicola strain Ha7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 2327801 29 100.0 37 ............................. GTACTTGGGTCGAGTTCACCACTCAGTACAACATCCG 2327867 29 100.0 36 ............................. CAAGACGCGCTGAGCAATGGCCGCGCTGGTTGCTGA 2327932 29 100.0 35 ............................. GATAACTGCTTCGGCAACTTTCTGACCCAGATAGT 2327996 29 100.0 33 ............................. CATCCGAATCTGGATCGGGCAAGGGTGAAGCGG 2328058 29 100.0 36 ............................. CCATCGGGATTCGTTGTGGCAAACGTGCTGGCTGGA 2328123 29 100.0 36 ............................. TTGTACTGGCGGGCAAACGCTGCCCATTTTTGGCCG 2328188 29 100.0 36 ............................. GCGCTTAATATCTCGGTACAAATTGAATTGAATCGA 2328253 29 100.0 34 ............................. CTATTAATACCGGCTGTGCCCCCTTCTCTCCCAG 2328316 29 100.0 35 ............................. TGGGTTTTTCTTCGCCTCCAACCGGGAAGTGTCGA 2328380 29 100.0 36 ............................. GTATGTAGGTATTGGTAACGTAGTTGAAGTTGTTGC 2328445 29 100.0 36 ............................. TCCTATGGTAGTTGATGATCGCTTTGTAATAGCGAA 2328510 29 100.0 37 ............................. TTATTCAAACGCGACTCGGTCGGCAAGGCCAGCGGTG 2328576 29 100.0 37 ............................. TCCGGTGCCTGCGTGGTCGTATAGTCACTTCTGGCCC 2328642 29 100.0 37 ............................. GCGTTTGAGGGTGAACTATCGGGCAGACTGCCAGCTG 2328708 29 100.0 36 ............................. GCAAAAACAGGTGCATGTGCCCATTGGGGCCATTAA 2328773 29 100.0 36 ............................. CTACGCATCGCTGGCAGGCATGGCGGGCGTTTTCCT 2328838 29 100.0 36 ............................. GCGATAAGGCCCCCGATGAGGTTGCCCATACCCTCG 2328903 29 100.0 36 ............................. ACGAAAGCGTAACCCGGCTGTATCTGGATACCAAGG 2328968 29 100.0 37 ............................. GCAATGAGGGCTTTACCAATGGCGGCATAATAATTGG 2329034 29 100.0 37 ............................. GCAATGAGGGCTTTACCAATGGCGGCATAATAATTGG 2329100 29 100.0 35 ............................. CAGCGGATTGAATTGCGCTGGCGGTATCGGTCTTT 2329164 29 100.0 38 ............................. TTATTGAGGGGAAGGTTGGTTACAGGCAACTGGAAAAA 2329231 29 100.0 35 ............................. GTATTTTAAAAATGCCGGAATCAAAAAAGGTTGTG 2329295 29 100.0 37 ............................. CTGGCTGTATCGCCTATAGCCGTGACTTCACAGACGA 2329361 29 100.0 36 ............................. CTGGAAAGAAAAAAGCGCCGGATAGTTTTATTGAGC 2329426 29 100.0 40 ............................. TTGAGAATGATTGTATCGTCAATAAAATGTCCGACATAAC 2329495 29 100.0 38 ............................. GGTTAAGCCATGACCGCTACGGAGTGACTTATCATTCA 2329562 29 100.0 36 ............................. TGTAGGTGGTAAAGCCCGTCAGTACCACATTGGAAA 2329627 29 100.0 36 ............................. CTGTTCCGGTTGCCGCTGTTCCGGTCGCCGCTGTTC 2329692 29 100.0 36 ............................. TAAAGGCTGTATCAGCAAAGAAGATAACCGGCTCAT 2329757 29 100.0 37 ............................. GGCAATGTTTTTACCGTTGTACCAGGACCGGAACGTG 2329823 29 100.0 36 ............................. GTACAGATACACCCGACTAGACACGGCATCACTGAG 2329888 29 100.0 37 ............................. AAGTCGTAAACGGCAACGTGCGGCCTGTCTATAAATA 2329954 29 100.0 36 ............................. GACTCCCAAAACGCGATCCCTGTTCAAGCTGTAGAA 2330019 29 100.0 35 ............................. TTAATGTCCTTGCTTGGTTTTGGGAGGAGGGAGCC 2330083 29 100.0 35 ............................. GCCACGTGCTGGTCAAAGTCGCTATCGACAATAAC 2330147 29 100.0 37 ............................. TAATAAACAGCGGTGTCGTTGGGTCCTTGGCTACGCC 2330213 29 100.0 36 ............................. AATTTTTAGGGGTAATGGGCCGCTCGCAAATGCTAA 2330278 29 100.0 36 ............................. GGAAGATAAGTGGGATTGCGATGCCAATTTAGTCAT 2330343 29 100.0 37 ............................. GTAAGCCGGACGCGCTGGCCAGGGGTGAACGCGGGGG 2330409 29 100.0 36 ............................. ATGGGTTTTGAGTCGCACAAGTTGCGGAATGGCGTT 2330474 29 100.0 37 ............................. GTTGGTGCTATACGTACTAGCTGGCAACGCTGCGTTG 2330540 29 100.0 37 ............................. GGTGTATCAAAACCAGCAAAAGCATCTACCATGTACT 2330606 29 100.0 36 ............................. CTGTGCCCTGCGTCGTGGCCGGGTAATCGATCATGG 2330671 29 100.0 36 ............................. TAGAAGATGACACCGCTAAGCTGTGCGGCAAAAACA 2330736 29 100.0 37 ............................. GTGTTTACCGATGAGGAAGCGAACCGAAAGTATCTGG 2330802 29 100.0 36 ............................. AGGGGTTGAGCGATACGTCTTTGCTGATCATTACGC 2330867 29 100.0 34 ............................. CTGACAATACCGCCTGCTCTGATGTCCCGAATGG 2330930 29 100.0 36 ............................. GCGATATGATTGCGTTTAGCCGGGAATACGTGCTAC 2330995 29 100.0 39 ............................. CCGTCGATGAGGATGATGCTGTGCTGACGCTCGAGCTGG 2331063 29 100.0 36 ............................. TTAATGTTTCGGCGCTGCTGACCCAGCCTTCGGTCA 2331128 29 100.0 36 ............................. GGGCGAAATGCCCTTGAGAAAATACGCATGCAGGGC 2331193 29 100.0 35 ............................. GCGAAATTCAGCACCAGTGCGCCCAGCCGGGTGTC 2331257 29 100.0 36 ............................. CACGTACTCAGTAGGTGGTACCTTCCAAGGTCAGCC 2331322 29 100.0 36 ............................. TTACTTTAGTTGGTATTGTAAGATTTGACATCTTGT 2331387 29 100.0 37 ............................. GAATTGTTAAACGTTCCAGGTTTCGCAGGTATACGAC 2331453 29 100.0 34 ............................. CTGACAATACCGCCTGCTCTGATGTCCCGAATGG 2331516 29 100.0 35 ............................. GTAACGACAAGTCGAATGCTGGGCCACCTATTCGT 2331580 29 100.0 42 ............................. TTTTCCAACCTGTATCACTCCATCCATTACCGGATAACATAA 2331651 29 100.0 36 ............................. CCTAGAAAGCACGATGCCTAATGGGAAGGTGATTGA 2331716 29 100.0 35 ............................. AACGGCGTGGGGCTTAAGGGCGAAATGTACGTGGG 2331780 29 100.0 36 ............................. CATAGCTTTTCCTAGCAACAATTTGATTTATCGTCG 2331845 29 100.0 36 ............................. GTGATAAAGCGGGTCTGACCAGCGCCTGTACCCGAC 2331910 29 100.0 37 ............................. GGCAACTAGAGCAGGGGGCGACTTCTGGCAGATAATG 2331976 29 100.0 36 ............................. GTAGCCGACCAGGTTGGACTCATATCTGCGTTTACT 2332041 29 100.0 37 ............................. CTACATACGACCGGTGCTTAATCCCGTTTTAATTTTA 2332107 29 100.0 36 ............................. ACGAATTACGTAAGCCTCCTCCGATAAGTTTAACTC 2332172 29 100.0 38 ............................. CAAAGTTGCTTAAGGGCGTAACGTTCGTTAATCGGACG 2332239 29 100.0 37 ............................. TAAGCGGTTGCCTCTGCTGCTACGAAAGGCAAAACAG 2332305 29 100.0 37 ............................. GCGTTCACCCCAGGGCGAATAAAATCATCTATACCTC 2332371 29 100.0 37 ............................. CCCTGATGGGGTGCCCGTGCCAAAGTGCATATATAGC 2332437 29 100.0 37 ............................. GCTATGAGCTTTCTGCTGGATGAACGCTGCGTGCTGT 2332503 29 100.0 37 ............................. TTCGTCTCCTTTGTTGAGTATAAATTTACAGCCTACC 2332569 29 100.0 37 ............................. TACTGGTTATTGATCCCCATGTATTCGATTCGGTTAT 2332635 29 100.0 37 ............................. GAGTGCCTTAACCAGCTTACGGGGTAAGTTTACTCAG 2332701 29 100.0 38 ............................. GCGGTTTAGATTCATCATTCGTTGAGTTTTCCTTTCCA 2332768 29 100.0 36 ............................. GACGTAGGCCGGCACCTCGGGCGGCTCATAGCCAAC 2332833 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ========================================== ================== 78 29 100.0 36 GTCTCAATCGCACCTTCGGGTATTGAAAG # Left flank : ACTAACCGTTTTTGACTGATGCCTTTTTGTATTGCAGTATATGATGTGAACCAGAAACGGACGGGCAAAATGCTCAAGCTCTTTCGGCGGTATCTGACTTGGGTACAAAACTCCGTTTTCGAGGGTGACTTAACTCCTGCTCAACTGAAGCATTTGCAACAGGAAGCCGATGTGCTTTTACAAGACAATGATGGGGTCGTCTTTTATCAGCTTCGCGACGAGCGTTACGTGGAGCGAATTGCTTTAGGCGTTGATATTACGAACCGAAGTCGGTTTTTATAAGTCGTCGGATAGGTCCAAAAGCAAAGATAATTAGCTACTTAAGTGAATTTTTTTTGCATGACTTACTAGTAAATTGTTGATAAAGAGTCAGTTGTTTAAGTCGTCAGCCTGCCGGTATATTTACAGTACTGGAGGCTGACGACTTTGGTTTGTTCTTTGACCTATTAAAAAGTGTTTCCAGGCCGTAAAAAGGCCTATTTTTGTGTAAATTTCACTTG # Right flank : GTACATGGCAAACGGCCTACCGGGGGCCATTACTGATTGTCTAAATCGCAAGTAATGAAAGTCTATATTGCCATTACCGTAACCTGATAGGGTCAATACCTAATTCGTTCATTAAAAGCCAATCGAAGTTTATTTATTGAACTTGTAACCTACTGTTAATCAGTCAATTTTGGCCGAATTAAGCTTTTGAAAAAATCGTTCACGAAAACGCTTCAATAATTGAACTACTAACCTGGGTAACCAACCTGCCAAGTCCGCTAACTTGTGAACCTAAAATCGTTCACGAAAAGGTTGCCTTTTATGGACGCACGCTATGAAAAGTACAACTAGTTAACAAACTCAGATCGCCTGTTGCTTCAATCGTAATAACGGAAAAATTCTACTTTGAGCATTCGGTCAGTGCGGTGCTGGTACGAAGATCAACAAAGGCCTATTCGCTACTGTATTTCCTCAATTAACGGTTGTGAATGCGTTGCCCCTTAACCAGTTTAGATACTTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAATCGCACCTTCGGGTATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.10,-2.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 2 7329271-7325678 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025096.1 Spirosoma pollinicola strain Ha7 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 7329270 30 100.0 35 .............................. TACGCTCAGGATTAACAGGCTTTTCCTGCGACACA 7329205 30 100.0 38 .............................. TTTGATGGCCCCGCCGAGCGCCCGGCCAATGCCGAAGC 7329137 30 100.0 36 .............................. TCGGGAGCAAGAACCGACGTTTTAACCTCAATTGTT 7329071 30 100.0 37 .............................. GAACGAGGAACACCCGCTGCGGGATGAAAAGTGGGGC 7329004 30 100.0 37 .............................. ATCGTGATGGGCGGCACCCGGAACGTGAAGCGATCAC 7328937 30 100.0 36 .............................. TTGTTGATGGGCACGACCGGCACTAAAACGTCGGCA 7328871 30 100.0 37 .............................. CCATACAGGTAGAACCTAATGTCTTGTGCTAAACGAT 7328804 30 100.0 36 .............................. TTCAGGAACGAATCAGAAACACGAATGCAGGCTTTA 7328738 30 100.0 35 .............................. ATCGTGAAAGTGGTGTTTCCGGACAGGCCGCCGTT 7328673 30 100.0 35 .............................. AACGTAGAGAGTGTGCTTCCCCCTGACGCACTTGG 7328608 30 100.0 36 .............................. CCTTAACCAGGGAGTCAATCACGTCGTCCGCCTTTA 7328542 30 100.0 34 .............................. ATCTGACCGGATAGATTCATCACGCCGTTTTTGA 7328478 30 100.0 36 .............................. TTTCCGATGCTTAACGATTTGGAGGATTTTGACGTA 7328412 30 100.0 35 .............................. ACCGACAGAAAGAGCAGGGCGAAGCCGCCAAGACA 7328347 30 100.0 35 .............................. ACGTATTTCTGGGGTATCACGCGGGCCTGAACACA 7328282 30 100.0 37 .............................. TTGGCAATCTTTAACCGGAATGTTGCCGAGCCCGCAC 7328215 30 100.0 36 .............................. TTATCTCACTGGGCGACAACAACCAGATCACCTTAA 7328149 30 100.0 36 .............................. ATCGTACAGAACACCCGCGTCGTGGCCGACAACTTC 7328083 30 100.0 35 .............................. AAAATGCCCGTGGGTGTTTTGGTTTACCATTTCTA 7328018 30 100.0 36 .............................. TCATAAAGTACCCGCGAGTACCGTGTTAGCCGCCGG 7327952 30 100.0 37 .............................. GTTCCAGTATCTAGTTTGGATTGGCTGCTGCTGTTAG 7327885 30 100.0 37 .............................. TAGAACCGGGAACGGCTTCTTTACGGTATCCTACTTG 7327818 30 100.0 35 .............................. AACCCTACCAGCCAGAGGCAATCAAAAGAACGCTT 7327753 30 100.0 36 .............................. ATGGCACTGGCACCGGTGCGGGTAGGTTTGTGATTG 7327687 30 100.0 37 .............................. TTCGCCCCGTTGCGGGCCCTGCTGGTCAAGCCCGAAT 7327620 30 100.0 36 .............................. TGTACCAGATGCACTTACCGGCTTCGCCCCGGTTGT 7327554 30 100.0 36 .............................. ACAACATTACCACCCGCTCCAAGTGCATCAGCATGA 7327488 30 100.0 37 .............................. TCGAAAGCATCGTTGAATCGTTCGAGGAAGATTTGCA 7327421 30 100.0 36 .............................. TTCACAGGCCGGGCTGGATGAGTTGTCGAATCAGGA 7327355 30 96.7 37 ...C.......................... TCAGATAATTCAGCTTATCGTCTTCCGAAACAGCCGT 7327288 30 96.7 35 ...C.......................... TTCTTTAAACGCTTCCTCAAGCCCTTCCAATCCTT 7327223 30 96.7 35 ...C.......................... TCTTCAGAATCAATGAGATATTGCCCAGATACTCC 7327158 30 96.7 35 ...C.......................... AATACCCGATCAGATGCCGGTGCGGGAAGGCGTCC 7327093 30 96.7 37 ...C.......................... ATGTGGCTATAGAGCATTCTAATGGATACTAAATCCT 7327026 30 96.7 37 ...C.......................... TCTGGATGAACAATGATAGCCCCCTCAAAGGGAAGTG 7326959 30 96.7 36 ...C.......................... CTGGCAATAAAGCCCCCGGCTAGTCTTGATGCCTTG 7326893 30 96.7 35 ...C.......................... ATAAACCTATACGCCCACGTCGGCGCATGGAACTC 7326828 30 96.7 35 ...C.......................... TCGGACAACGGGGGCAACCCGTTCGGAGTGGCCAA 7326763 30 96.7 35 ...C.......................... TTAAGTTCAGACCTGAATCCGCTGCGGATTGAATC 7326698 30 96.7 36 ...C.......................... ACCGACAGGAAAACGTTTATCATTTCTAATTCAGCC 7326632 30 96.7 36 ...C.......................... TACCAATACCGGTATAGCTTGAGTCACTGGTAAGCG 7326566 30 96.7 36 ...C.......................... GAAGTTTCCGGCAGTAAAGACAAGCATCATTAGTGC 7326500 30 96.7 35 ...C.......................... TTGACTAAACTCAAAGGAGCGGAAAATTTAATCCG 7326435 30 96.7 37 ...C.......................... ACGTATGCCGTTGGCGGTTCACTACAAGCCTTGCAAG 7326368 30 96.7 35 ...C.......................... ATATTTACGGCTGTAGCTGTGGCCGTAGCGAGTGC 7326303 30 96.7 34 ...C.......................... TTGAATTTTATATAATTGGTCGGGTTTGCGTTGA 7326239 30 96.7 36 ...C.......................... ATGGACTGCAAGCGGTCAATTTCTTTATTCTTTTTG 7326173 30 96.7 37 ...C.......................... ATGGGAGAAAAAGGGGTACGGAGGACGTATAAACAAT 7326106 30 96.7 35 ...C.......................... GGGTAAAAGGATTGAGCGAACTTAAGCCTGTATGT 7326041 30 96.7 37 ...C.......................... AGGCAAATGGATCATAAAATCACAATTGGCCGTAATC 7325974 30 96.7 37 ...C.......................... ATGGGTTTGGGACCGGGTTGGGGTACGGAATAATTGC 7325907 30 96.7 36 ...C.......................... TTTAGTTAGATCTGTTGTAATTGTTGCGGGGAAAGA 7325841 30 96.7 38 ...C.......................... TCGGACAGGCAGTAGGATTGCAAGTGGTGCCGTGGGAA 7325773 30 96.7 36 ...C.......................... AGTTAAAGACGAACTATGTCTGTGGCATTGATCCCG 7325707 30 86.7 0 ...C..................C...C..C | ========== ====== ====== ====== ============================== ====================================== ================== 55 30 98.3 36 CTTTTAATCGTACCAGAGTGGAATTGAAAT # Left flank : GGTGGTAAATAAGTGGGACTATGTACGTAATTTTAGTGTATGACATGGGGCAGAAACGCGTCGGGAAGATGCTGAAACTCTGTCGGCGGTATATGAACTGGATTCAGAACTCGGTGTTCGAGGGCGAACTGACCGAGGTGCAGTTACGCGAGCTGCTGCACGAAGCCAAACGCATTATGAACGAAGAGGAAGATAGCCTGATTCTGTTCAAAAATCGAGATCTAAAATGGCTCGATAAACAAATTGTGGGTGTGGAGCGCCAATCGACAGACAATTTTTTGTAGGGGCTATTGTCGTCGGTCGGGCTTAGTTTGTTCTTTGACTTCTTATTATAGGGTAAAAAATATAGTTTAATCGGCTTAACTGTCTGTAAGGTAGCTAGTCGTCAGTCGGCCGGGTTTTTTGTACTATTGCCGACCGACGACTTTTGTACCTTATTTTCGGTCAAGGAGATGGCGTCTGGGCGTTGGAAACGCCCTTTTTTAGGCTTAATTTGACGG # Right flank : AGTATAGTGGAGATTTTTTAGGCGGCCATTGAGGAAGTGTAAAAATAAGATTCCTGTTGACTGGGCGTGCGGTAATTCAATACTGAATGCTTCCGTCGGCGGTTGTACCATCCCTCGATATACTCGAAAGTAGCCAACCGAGCCGCTGCCCGCGTGGCAAAATAAGTATGATTGACCATCTCGCACTTGAGGGTCTTAAAAAAACTCTCAGCAACCGCATTATCCCAGCAATTTCCCTTGCGGCTCATACTTTGCGCCACCGGTAAGTCCTTTAGTTCATCCCTCTAGCTAGCTAGATTTTCATCACTATGTGGCTTGTGAGCGATGCTGTCATCGGTCAACAAAAGCCCGTCAGGTTCCTGAATTTGGCGGATTAGGGGTTTGACATGTTGCCATAGGGTCCGATTATCGCCTTGAAGTCGATTGAGCAAATCCGTGACCGCATCGTGGCCAACTGCCCCGTCGGTTAAGCGGGAAAGTCCGGTAGCGGTGGTTTGTCC # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGTACCAGAGTGGAATTGAAAT # Alternate repeat : CTTCTAATCGTACCAGAGTGGAATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 3 8412620-8415253 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025096.1 Spirosoma pollinicola strain Ha7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 8412620 29 100.0 35 ............................. TTTGTGAGATACACTGCCCACGTTGCGTAACACAT 8412684 29 100.0 36 ............................. CCGATGGCGTCTATCTGCTCCTGATAGTACATTACC 8412749 29 100.0 36 ............................. GCAAATAGGTGATATGGGCTATCCCATGGTGGATAT 8412814 29 100.0 36 ............................. TTATCCTGCGCCACGCCTGGCACACTGGCCACCAGT 8412879 29 100.0 36 ............................. ATTGTTTATGCCCATCAAAAGGAAGCGGAGTGGTCG 8412944 29 100.0 36 ............................. TTACTCTCCACACTCGTTACAGCCCAAATCGTTGCC 8413009 29 100.0 38 ............................. CCGGTCGTGTCCATTATGTTTTGCTGAGTTTATCGAAC 8413076 29 100.0 37 ............................. TTAATGGTGATCAGGGCTTGCTTGCGATCCTGACCAG 8413142 29 100.0 37 ............................. TTGGCGACGTAATAGTCACCATCCGGCAGATACACGG 8413208 29 100.0 35 ............................. GTTCTGACATTCCATACACTACGGCTAACGGCACG 8413272 29 100.0 36 ............................. TTCCCATCGGTCCACCCAGCAGCGTGCCGCCAATCG 8413337 29 100.0 37 ............................. ATGGGCTGGATTTGCATCTCCTGCGACGTGTACGACT 8413403 29 100.0 37 ............................. TTCTTATTGACAAAAAAAGATGAAATGTACCCACTAC 8413469 29 100.0 35 ............................. TTCCGGATTCTGGAGGGGTCGACTGTGGCCGCTGT 8413533 29 100.0 36 ............................. CAAGTGTTCAGCTTTGTATTGATCGTACCAATACAC 8413598 29 100.0 38 ............................. TTGCATCACACGCTCATTGGTCGAGTTATAGCGGTCAG 8413665 29 100.0 37 ............................. TTATACCTGCCAGCGTCCAGGCGTGATCGAAGCGCGA 8413731 29 100.0 37 ............................. TTGACACCATCAAGGATAAAACGCAGCTCACGGCCAA 8413797 29 100.0 37 ............................. TCTTATGTCTGCGCGAACTTCATCGGGCAAATAGACA 8413863 29 100.0 38 ............................. GTGATCTTGTCCTGCAGGCGGTTGGCCTGTACACTGAA 8413930 29 100.0 35 ............................. CATGAGCTTCAAGGATGATGCTGATTTCGAGGGCT 8413994 29 100.0 35 ............................. GAACTGGTGGTGTAGTCGGTAATGGTCGGCGGTGT 8414058 29 100.0 37 ............................. TTCGTAGATGGCCACCGGGTAGTCGGTAGGGAAGGGC 8414124 29 100.0 36 ............................. AAAGTGTCTTCGGATGGGGTATGATGCTGACCATAT 8414189 29 100.0 36 ............................. AAAGTGTCTTCGGATGGGGTATGATGCTGACCATAT 8414254 29 100.0 36 ............................. AAGTCTCCCCATTGCCTATACCCTCGACGCTGATTG 8414319 29 100.0 35 ............................. CAGGCTATATCCCCTTTGATGAACGCACTCGTTAC 8414383 29 100.0 37 ............................. ATGATTGATACAACGCTTGAGAGAACCGGCAAATACT 8414449 29 100.0 37 ............................. TTGGGCGTTTTTCTGATACGAAAACAATTATGCTTGC 8414515 29 100.0 35 ............................. TAATATGGACATTACCGGCAAGCACATTGACTCGG 8414579 29 100.0 36 ............................. GCTTTGGGATATGGTCTGGCGGGACGTGTACAAAAC 8414644 29 100.0 36 ............................. TAACGGCAGATCAATACAAAACCTCTACTCCTCCGC 8414709 29 100.0 36 ............................. GAGAATGGCGGTATGGCCTTGATTGCTCCTACAGCC 8414774 29 100.0 35 ............................. CAAGGTTGAGCAGATTGACGCGGCTACGCTTCTCA 8414838 29 100.0 35 ............................. TTTCTGACGGGCGCTACACTGGAACTGCTGCAACA 8414902 29 100.0 36 ............................. TTCTTCATTCGCCTTTCTAATAGTCCGTCTCCTTTG 8414967 29 100.0 36 ............................. CTATTCAAAACTCAAGCAATCGGGCTATTGATGATA 8415032 29 100.0 37 ............................. AAACAGAATAATATATGGCTTTTGTCTTGATCTCAGA 8415098 29 100.0 33 ............................. GCGATCGAGTTACTAAACTCAGTTTTCAATCGA 8415160 29 100.0 36 ............................. TATCGGGCATGATACGCCAATTAAGGGAATTCTCAA 8415225 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 41 29 100.0 36 GTCTCAATCGCACCTTCGGGTATTGAAAT # Left flank : ATACCTAACCGTTTCTACTGATGCCTTTTTGTATTGCGGTATATGATGTGAACCAGAAACGGACGGGCAAGATGCTCAAGCTCTTTCGGCGGTATCTAACTTGGGTACAAAACTCCGTTTTCGAGGGTGACTTAACTCCTGCTCAACTGAAGCAATTGCAACAGGAAGCCGATATGCTTTTACAAGATAATGATGGGATCGTCTTTTATCAGCTTCGCGACGAGCGTTACGTGGAGCGAATTGCTTTAGGCGTTGATATTACGAACCGAAGTCGGTTTTTATAAGTCGTCGGACAGGTCCAAAAGCAAAGATGATTAGCTAGTTAAGTGTATTTTTCGCATGACTCACCAGTAAACTATTGATAAAGAGTTAGTTGGTTAAGTCGTCAGCCTGCCGGTATATTTACAGTACTGGACGCTGACGACTTTGGTTTGTTCTTTGACCTACTAAAAAGTGTTTCCAGGCCGTAAAAAGGCCTATTTTTGTGTAAATTTCGCTTG # Right flank : TGTATTTCGGTCGGTAAATACGGAATCATTTTTGTGGAAGTGACTTGTCCGGCTAAATGTTGACCATAAATAGCCAATTTATGGACAGACTTGTTAAACTCCGCATGAAGCAGCCCAAACGAATCATGCGCGAAATGGTGGCCGCCGTTCTCCTCGATCAGCTCAACATTGACCAGGCCGCTGAGCGCTATAAGGTCAATCGCTTAACGGTACTTCGATGGATGAGGAAAGTCGAAGAGGAAGCCAAGGCCAGTAAACAAACCACCCCGATTGCCTCTGATCAGCCCTCCCCGCCGACCAGAAAATCAACTCGGCGCTCTGCCCCGGAGGACGAAGTTAAGCAACTACGGACTAAGCTGCAGTCGATGGAAAAAGAACTGGAGACGGCTAATTTTAAAGCCCTTTACTATTCGACCCTGGTCCGGGTGGCTAAACACGAGCTGGGGGTCGACGTCGAAAAAAAGTCCGTTACCAAGCCATCCGGTTTATGCTGACGAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAATCGCACCTTCGGGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.10,-2.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 4 8474690-8475115 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025096.1 Spirosoma pollinicola strain Ha7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 8474690 30 100.0 36 .............................. ACCAAACTCGTCATTGATGTCTCCCAGGTCAATGAG 8474756 30 96.7 37 .............................G GTAGTAAACTTGGGGTCATTGCGGCCAATAGTGTTGA 8474823 30 100.0 36 .............................. ATTAAAAGTTCCCATGACCATGCGTGATATGCTGCT 8474889 30 100.0 36 .............................. CTGCTTAACGAAATGGTATAGGTGGGCTTACCGTGT 8474955 30 100.0 35 .............................. TCCGGATATCGCGCTCGGTGTAGGACTGTACCGTG 8475020 30 100.0 36 .............................. TAATAATGCCGGATAGGATACCCGCGCCGGTATTAA 8475086 30 90.0 0 .....................C...A...C | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 98.1 36 CTTCTAATCGTACCAGAGTGGAATTGAAAT # Left flank : CAAGGCCAGCTCTCTCAATCTCAATTACCAGCTGCCCCGGTTGATCTACAAAACCAGATGGACCACCTGACAAAAATGGTCGAAGCTCTTACTAATCGAATGCCTGAACAAGGAAAGAAAAGTTTCTGGCAACTAGCTAGCTAGAGCTTCTCGAAGCTCTCGCGAAGCTCTCGTTGCAACCTTCTGATCTGTTGCTGTTCGTCAGTAAGTGTGGTATTGGCAGGCAACGTTTGATCGTTTTTTTTGTGGCGTTGTCTCCATTTGCTGATTCGTCCTGGATCGATGTCCAATTCGCGGGCGGCTTCTTGAATTGATCCTTTTACATAAGACAGCTCGACAGCCATTTCCTTGAATGCTTCGTCAAACACACGTCGTTTAACCATGGTCAAATTGAAGTTTGGCCTCAAATCTGCCTAAAAAAAGTCTCCAGTCAAATGTAGCAAGTTCAGAGTGGAATTGAAATTCACTAACCCACACCCGGTACTGATCGAATTTAAGTC # Right flank : CTTAATTTATTGGTCAATATAAAACTGGATTATCAACAAACGGTCAACATTTTTACGGACGAGTCATTAACAAATCGTTCAAATAAAGGTAAGCGTACACAGTTTATTGAACTTACAATGCTATGTATAACAATTAGTTACACCAATATTTCATTGTCGTAAAATCGTTCAGGAAAACCCTTGGCCAAATGAACGCGTTTACAAATAGGTTCTTTTATGGGAAAGGCGATGTAACAGGATCGAATGCACTTTACCCGCTATCCTATGCTAAGCCGCGTGTCAGGTAACCTGTCTGATCAATCCACTTTCTTAATCTCGGTCGCACTGAGGGTGATGGTAAATTCGCGCCGTTGACTGTTCCAGCAGTGTACCCGCTGACCATATTGACTGATCACCGGGACAGGCCAGTCAATGGCCCCATTAGCCGCTTCTAACGCTTGAGCTGCCTTTGGGTTAATGAGCGTGACTAAGTCATTCAACTTGAACTCGTGGTTTTTCTT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTAATCGTACCAGAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //