Array 1 64-884 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQPV01000015.1 Escherichia coli strain EP113 Scaffold15_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 64 29 100.0 32 ............................. TTGTGCGAACCTCAGTTATTGTGCCCTGACGA 125 29 100.0 32 ............................. AATTTATTCGGTTTATTCCGTCGGCGCGCGAC 186 29 100.0 32 ............................. GGGATTTGCACTCCAGTTGATTGACCCGCAGC 247 29 100.0 32 ............................. CCGCCGTCGAGTGTAATACCCTGATCCATCGC 308 29 100.0 32 ............................. CAGGATTGAAATACAGCCTCGGCCTGGGACAG 369 29 100.0 32 ............................. AGGCGAGGGAGATCAGAGATCAGGCTATTACA 430 29 100.0 32 ............................. AGATCGGCGGCCAGTGGATAACCGTTATCCCC 491 29 100.0 32 ............................. GTGTGGTAATTGGTGGTCTGGCTGGTGGTTTA 552 29 100.0 31 ............................. CCGCGCAAATCCAGCGAGCCGCCGACGCTCA 612 29 100.0 32 ............................. TTGCAAACCGTGGCAAACGCAATTAACAAAAA 673 29 100.0 32 ............................. ATTGTTATAATTATTTATTGAAATATCATTCC 734 29 100.0 32 ............................. AATCTATTGTGAATTTGAAATGGTCCAGCACT 795 29 100.0 32 ............................. GGTAAAAACACGGTCTGAACCGACATTCATGT 856 29 93.1 0 ...........AT................ | ========== ====== ====== ====== ============================= ================================ ================== 14 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGTG # Right flank : GGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //