Array 1 18-724 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG740115.1 Prevotella sp. oral taxon 317 str. F0108 supercont2.44, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 18 37 100.0 41 ..................................... ACCAGGTGCCAAAATGTTCAGTAAGCAGCTGTGCTTCAAAA 96 37 100.0 36 ..................................... TCTTGAATGAATTGCTTAGAAACACCCCAATCAACG 169 37 100.0 37 ..................................... TCGATTAATAACCGACTATTTTGCAGCCCTTAAAGAC 243 37 100.0 36 ..................................... AGTGTTACAGCTGTTATTAAACAAAAAGATGACTTA 316 37 100.0 38 ..................................... TCAATCATCTGATTGATTTTCAGTTGACTGATAGAGCA 391 37 100.0 36 ..................................... GGGTATATTAGTCAAGAAAACGGTACTTATGCTTTA 464 37 100.0 39 ..................................... TCAGTTGACCTGAACGATGGAGGAACGCAAAATCAACAA 540 37 100.0 39 ..................................... AGATTATCATCTACACTGAATTGCAAGTCTTTTGTCAGT 616 37 100.0 35 ..................................... TAGTGCATCAACATTCAACCCGTTGAATGCACTAG 688 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 10 37 100.0 38 GTCTTAATCCTTGTTTTAATGGATGGTGCACTCGTAC # Left flank : TTATTCTCTTCTGGCTTG # Right flank : ATACTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTTTAATGGATGGTGCACTCGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [18.3-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 8428-6461 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG740084.1 Prevotella sp. oral taxon 317 str. F0108 supercont2.13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 8427 47 97.9 29 ..........................A.................... ATGTCATGATGCGCTATGGCACCGCTGAT 8351 47 95.7 29 ..........................A..C................. TAAGGTTGTTTCCTGTTTCTTGTCAGGCT 8275 47 100.0 30 ............................................... AATTTCTCTTGCAATAACCTCATTATCGAA 8198 47 100.0 30 ............................................... ACGCGGTAGCCGTGGTGCTGCTGTCCGTAT 8121 47 100.0 30 ............................................... ACTTGTCTGAAATTAAAGAACTGAAAGCCG 8044 47 100.0 30 ............................................... AACAAGTTTGGCGAAAGTCTTATCGAGGTA 7967 47 100.0 29 ............................................... AATAAAGTAAAATGAGCAGAGAAGAGTTA 7891 47 100.0 30 ............................................... CCAAAGGAGCACGCATACGCGCGATTGTCC 7814 47 100.0 29 ............................................... TGAAGATAAAGAGGCATATACTCAGACAT 7738 47 100.0 30 ............................................... TTGCCGCCGAAAAGGCAGATGCCGAGGAGC 7661 47 100.0 29 ............................................... TTGTCCAAAAGGACAAAGCACCATCATAA 7585 47 100.0 30 ............................................... CAAAGTATTTCACACCACCGCACGATGTGG 7508 47 100.0 30 ............................................... TTTGACGAACAATATCATACTGCGCAGGCT 7431 47 100.0 30 ............................................... TCCTTTTTGAATTGGTCAAGTACCATTTTG 7354 47 100.0 30 ............................................... TGGTTTGCCATTATCTTGGCGCAAGCGTTG 7277 47 100.0 30 ............................................... TGGTGTGAATTATTCCACACAGCCCGATAG 7200 47 100.0 31 ............................................... AAGACCATTACAGACTATACGCCGACAGGTA 7122 47 100.0 30 ............................................... TCAGAGAGAAAATAATAAACAGAATGATAG 7045 47 100.0 30 ............................................... CCAAACATCTCCTTAACCTTGGACCACATG 6968 47 97.9 30 .......................................G....... TAGATGCCTTCACAGGATAGCCATAACCAA 6891 47 100.0 30 ............................................... ATCGGCAAGTTTCTTCTTTTGCTGCAAACA 6814 47 100.0 30 ............................................... ACATAATAAGTTATTCTAGTATGGACAACA 6737 47 100.0 30 ............................................... TTGCATAACGATAATTACGATTGTTCTCTA 6660 47 100.0 29 ............................................... AAAAACTAAACGGCAAGATAATAATTAGA 6584 47 100.0 30 ............................................... GGACACATGAAGATATGTTTGTTCCTTGCG 6507 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 26 47 99.7 30 GTTGTGATTTGCTTGAAAACTCGTACTTTTGCAGTATCGCAAACAAC # Left flank : CCTACCTTTTATAAAGACTTTCCAAAAGGAGGAAGGTACTACATTCGTTCATTTTGAAAGCGTTACCATTTCTAAGGATGAGAAAGAAGTCTCAATAAGTTCACACCTTATCCGAGAAAAATAATTAAGAAATAAATTGAAGATTGATAGGTTGCTTTATAAGTCGACAGCACTAGACACACCTGCCAATATGCCCGCTGAACAACCTATCAACTCTGGTGGCAGCCAGTCTCCAAATAACAAAGATAAGGATAATTCTGCTGTTACGCAAGCAGAAAACCTTAAAAAAGAAGAGAAAGAAACAAACGAAACTATCTTGTCGCAAAAGGACTATGTGCAAAAACGTTTGACAGAAAAGTTTACGGATAGTCCCTATAATACGATTGAAGAGTGGGAAAACAATGATGTTGAGGGCTACACCAAAGCGTATGATGATATGATTGCCGAATATCCTAGCTATTTGCGCGGCCTTACCAAAACCGAAAAGCAGCAAGAAACCT # Right flank : TTAAATACCATATCTATTTGTACTACAAACAGATACAAAGATTTAAGAAATAAAAAAAATGAGACTGCAAAAAGAAATCCCACTCGTATGGAGTGGGATTTCTTCTTTCTAATAATATGAAGTGTTAGAACAATTCCAGCTGTTGCCCAGGTGCGTTAGGCTTATGAGGTTTAGTGCCATAAAAGAGCTGAATGTTGTCGAATTGCTTATCTGTTATACACAAAACGCCAACCTTGCCATACTTGGGGAGCGAGTTTTTCACCCGTTTGATATGCACTTCCGCATTCTCCATGCTAGCACAATGCCGCAGGTAGATGGAGAATTGAAACATGGTGAACCCATCTCGCTGCAAAAGGTTGCGAAAGTCTACGTATGCTTTCTTATCCTTCTTCGTTTCTGTTGGGAGATCGAAAAACACCAATATCCACATAACACGATATTCATTAAGACGGCTAAGGTTTGACATAAGCAAATTACATTTCAGGATAACTTACACGGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTGAAAACTCGTACTTTTGCAGTATCGCAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.70%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTGAAAACTCGTACATTTGCAGTATCGCCAACAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-3.50,-3.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 81977-88449 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG740072.1 Prevotella sp. oral taxon 317 str. F0108 supercont2.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================ ================== 81977 37 100.0 35 ..................................... GCTTCTCCTTCAAACCGCACCCAAACACCTAGCCC 82049 37 100.0 37 ..................................... ACTTTTGCACTCTCGTTTACTACTGCATTATTTTTCA 82123 37 100.0 34 ..................................... TTCCCAAGGTGTTACACTACCTCAGATTATTCTA 82194 37 100.0 40 ..................................... TTTTCTGGCTTTCAACCGCACCCTTTCGGGCTAACATCAG 82271 37 100.0 36 ..................................... TCTTGTACGATTGAAATTAATTGAGCCATTTTGTGT 82344 37 100.0 36 ..................................... TCAGCCACATGATAGCTTTCGACCTTCCCACCAAGC 82417 37 100.0 36 ..................................... TTTTCATTTTTTTAATCGTTGTTTTGGTGTGAACCC 82490 37 100.0 38 ..................................... CCATGTGTGGATGGGCTCGAATATCTTTTCGACCTCAT 82565 37 100.0 36 ..................................... TACCTCAGATTACATTCTCCTTCCTGAGGAGATGTA 82638 37 100.0 38 ..................................... TATAGCATAACGGACACACCATGTGTGGATGGGCTCGA 82713 37 100.0 33 ..................................... AGTCTTGTCTTGTACTTGATGTTGCCGTTCTTG 82783 37 100.0 37 ..................................... ATAATTGAGTGCCATATAAAGAGTCCACTTTGTGATA 82857 37 100.0 37 ..................................... ATTAAAAGAAAAAGACGAAAGTGTTTCGAAACACTTT 82931 37 100.0 37 ..................................... GCATTGCCGATGGCATATTGCTTGAATTGCTCTTTCT 83005 37 100.0 39 ..................................... ATCCATAAGCTTAGACATTATGGAATTGATATTTTTCTT 83081 37 100.0 37 ..................................... AATTTGAGAACTTCTTCAGATAACTCTAAATCTCTAA 83155 37 100.0 38 ..................................... CTTTTCATCCTTCATCTTTACCTTAATAACCTTAATGT 83230 37 100.0 37 ..................................... TTAATAATATCCTTTTTTTTCATTTCACTATATATTT 83304 37 100.0 37 ..................................... TATCATATACCCGAGCTTTACCAGATACAAAAGCATT 83378 37 100.0 36 ..................................... CACCATTGTGTGATAAGTTCCTTTCTTTTTCAATAT 83451 37 100.0 34 ..................................... TTACTTAACTTCACAAGTATAATTTCTTTCATCC 83522 37 100.0 35 ..................................... GTATTGCTATACACCCAAGCATTATCAGATATTGC 83594 37 100.0 48 ..................................... ACAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 83679 37 100.0 35 ..................................... AGGGCATGATACACGAAGCAACCCAACGTGAATGG 83751 37 100.0 35 ..................................... TTATTAAATGTTTTCGTTGTAATTGTCTTACATAT 83823 37 100.0 34 ..................................... ACATTAACACCTCGCACTAAGAGGTTCTTCTTTA 83894 37 100.0 37 ..................................... AAGGATTGTGATACTCTGTGCCACCTTGAACATGTTC 83968 37 100.0 36 ..................................... AACTACTTTACAAAGCAATGTGTTTTATGTATAATT 84041 37 100.0 34 ..................................... CTATCCACCTTGTTTGAATATCTTCAGGAGTACC 84112 37 100.0 36 ..................................... ACCCCAAAAGCACACTAGTACTAAGTAGTCATCACT 84185 37 100.0 38 ..................................... AACCCCATACGCTTGGCTCTACGTGAAAGCCAATGCGT 84260 37 100.0 37 ..................................... TGAACTTGTCTGTCCAACATCCAAACATAGGCTCTAT 84334 37 100.0 35 ..................................... ATGCCCTAGGCTATCGGATAGGTTAATGTTTCACA 84406 37 100.0 36 ..................................... TGTTCTTCCCCCATCCGATGAGCTGCAGGATAGGGA 84479 37 100.0 35 ..................................... ACGCTGTTTCCATATTGGGATTCGACTACTTCAGT 84551 37 100.0 35 ..................................... TGACTAGCTGGGCCTTTGAAAGGTCTACCAGCTCT 84623 37 100.0 35 ..................................... TGACTAGCTGGGCCTTTGAAAGGTCTACCAGCTCT 84695 37 100.0 39 ..................................... TTCTTTCTCTTTTTCTTTATGGCCCTTTCTTTTTCTTGT 84771 37 100.0 37 ..................................... ACTGACATCCCATACTGGGATGCCACAACCACAGCCT 84845 37 100.0 39 ..................................... CCTCCTTAAGGGTGAACTGAACTGACATCCCATACTGGG 84921 37 100.0 36 ..................................... ATAGCCACTTACCTGCGTACTGACGAAGACTTGAAA 84994 37 100.0 34 ..................................... AATATGCTATTTTTTGTATTGACTTTTTTATTGT 85065 37 100.0 37 ..................................... GTGAGCTCTCTTGGACTGGGTGTAATTGGAAGAGCTG 85139 37 100.0 37 ..................................... CCTTTATTATTGTCCCTCACCTCAAAGAACTTAGGTT 85213 37 100.0 39 ..................................... AGGTTGGTGAGAGGTTGTAGTACACAAGTTTAGTACCAT 85289 37 100.0 39 ..................................... CCTTAAGAGAAATAACATGTTTCTGATAGTCGAGGTTAG 85365 37 100.0 35 ..................................... CCCTACAATTGTCCTGGCCTTTCGGCTGTAAGCAG 85437 37 100.0 35 ..................................... TGAATAGGTTTCCATTGTTCCATTGAGGAACAATT 85509 37 100.0 32 ..................................... ACCTGGTACGATAACGTTCAGACTTATTTTGA 85578 37 100.0 35 ..................................... GTTAAAACCCTCTTTGTATTGCTCTGAAAATGTTG 85650 37 100.0 36 ..................................... TCAGTTTTCCGTGTGGTTTTACATAACGCTCCCTAC 85723 37 100.0 39 ..................................... GTACATTTCTACGTACCCATCCACGACTTAAATTATCAA 85799 37 100.0 39 ..................................... TCTCTAGGACTGCATCATAAAATTTTGTTGTTTCCATAA 85875 37 100.0 36 ..................................... CGTCTTCTAGCACACCACCAAGTCTCTTTGGCAGAT 85948 37 100.0 38 ..................................... TTGTTTTGTTTCTCAATTTCTGCAATGAAGTCGAGAAG 86023 37 100.0 35 ..................................... TGCGTTCGCCCTTATCACTAACAAAAGCGGGATAA 86095 37 100.0 34 ..................................... TTGCTGCTTTGGGAGCCATGCACACAGACATAAT 86166 37 100.0 35 ..................................... TTCTCAAGCAAACCCCCAGCAGGGTCTGCATACCA 86238 37 100.0 37 ..................................... TACGGTTTTTTGGATCTTCGACCCGATTTTTTTTTAT 86312 37 100.0 34 ..................................... ACCAATATAGGGGCTTTTGTTGTTAGTCTTCAAC 86383 37 100.0 35 ..................................... TTCTAGGAAATAATATTTGGGTACAATTATGCCCA 86455 37 100.0 34 ..................................... GTTGACAACATGATTGATAATAGTGTCGTGAGCC 86526 37 100.0 37 ..................................... TAAATGTAATGCACGCTAATAAAATGCTGTAAATAAA 86600 37 97.3 35 ...........T......................... TTGTTAGCTGGTTCGTTCGGGTCGACGTACAACCA 86672 37 97.3 36 ...........T......................... TACCATTTCGGGGAATATCCGCGAAAGGTCAAACGA 86745 37 97.3 35 ...........T......................... TGTGGTTTGTGAATTATTCACATTTTTCACACCGT 86817 37 97.3 36 ...........T......................... TGTTGCGGAGATTCGCCTCTACATGAAGTTAGGCTC 86890 37 97.3 36 ...........T......................... TGGATAGGTTTGAATATATTTTCAACCTCATGCCAC 86963 37 97.3 39 ...........T......................... ATCCACATAACCTGCTAGATACTCTAGAACCCAGGTTAA 87039 37 94.6 37 ...........T......C.................. AAGTCCATAGTACCATTATAGGGATGGCCATCAATGT 87113 37 97.3 38 ...........T......................... AACACAAAAGACTACTTAATGATGACCATGCTAATGTC 87188 37 97.3 34 ...........T......................... CTTTTAAATTTACTTCCATATTTAAGAATTAAAC 87259 37 97.3 36 ...........T......................... AGCTAGTAAAGCTAATCCAGCTATCTTTAGAAATCC 87332 37 97.3 34 ...........T......................... ACGGTAAGGTCTGCCCAGTCGACAAAATAGGTAT 87403 37 97.3 33 ...........T......................... AAACTTACACCAGACGATAATTACCGTTTTCGC 87473 37 97.3 35 ...........T......................... TGTCGAAAGCAGAGACTTGGCATAGTAAACTATCA 87545 37 97.3 34 ...........T......................... CTTATATACTTACACATAAGATCTGTTACTTTAT 87616 37 97.3 38 ...........T......................... TCAGATGATAGTTGTTGTTATCACAAGACCTTATGATT 87691 37 97.3 35 ...........T......................... TTGAGATAAACTCCCATAGCCCGCTTGTCTTTCAG 87763 37 94.6 37 ....A......T......................... TAATCCCACACGGAATCATTGGGATGGCACGATACCT 87837 37 94.6 35 ....A......T......................... TTAGGTCTTAGGTTATATCCGAATACTGCAAATAG 87909 37 94.6 37 ....A......T......................... ACCAATTGTATGGTACTTTCTAACCTCAAAAAACAAT 87983 37 94.6 35 ....A......T......................... ACATAACAATATAATATATTGGTAAGCCTAATTCT 88055 37 91.9 37 ....A......T.........C............... TGTACGACCTAGATTTTCGTAGAAGTCCCAGCCATCA 88129 37 94.6 35 ....A......T......................... CACTGATAGTAGAAAACAAATAATAGCAGCAACTC 88201 37 91.9 33 ....A......T.........C............... GTCATCTTTCCCCACTTTCCGCGTATCATGGCA 88271 37 91.9 35 ..G........T......................A.. ACGCCCTTGAACACGTCTTTGAGCCGACTGTCTTT 88343 37 94.6 34 ...........T.........C............... TCCTGTTTGCCGACCCATTCGCCATTCTCATTCC 88414 36 83.8 0 ...........T......CC.C........-.....T | ========== ====== ====== ====== ===================================== ================================================ ================== 89 37 98.7 36 GTACGAGTGCACCATCCATTAAAACAAGGATTAAGAC # Left flank : AAAGACAAGAAATTGGAGGACTTGATAGCACTTAATGAGGGGTTGCTAAGGTTAGATGTGTGGTAGAAAGACAAGAAATTGGAGGACTTGACAATGGCTAATGAGCGGTTGCTAAGGTTAGATGTGTGGTAGAAAGGCAAGAAATTGGAGGACTTGACAATGGCTAATGAGGGGTTGCTAAGGTTAGATGTGTGGTAGAAAGGCAAGAAATTGGAGGACTTGACAATGGCTAATGAGGGGTTGTTAAGACTAGATGTGCGATTGAGTAGGGGTAAGAGATAGGGGACTTGATGATGCCATGCCGCTTGTTTCTCCTTTATTTCCACAATATTGTTGCTTTTCTTCAATCTAAATTTTAACGTAAAACATTCGTCATTCTCGCCAATTCTTTGTAATTTTGCACTCGCTTAAAAGGTACGTAATATTTGTTAAAAACATGTCTTACGATGCACAAACAAGTCTTACAATGCGCTTAAACAAAGCATAACCCGAGTTTTGCT # Right flank : TGTAAAATCTTTTCACTCCTTATTATATATGCGATACGAACGCACATCCATTGTACAGGTTAAAGTGAGCTGTGGGTTGCGAAGGGTGTGTCGCAGCAGGCGCATCCTTGTTAAACGGATGCGACAACGCTGCGACGGCTGCTTTGTTGGCACAGACGTTGCGTGTGCAGACGAAAAAGGGGGAGGGGAAAGGGAAAGAAAATGTCCTTATGCGTTGCTGTGAGAAACAAGTGTTTCTGCAAGAAACGCATAAGGACATGCCGTTTTAAAAAAGAGATGCCTACTAAAAGAACAGCGTGTTGCGGTTGTGGGTGATGATGTCGACGTCTATTTGCTGGCCAATGATGCGCATGGCGCGCAGTTGGTCGGTAGAGATGGGGCAGACGATGATGCTGTCGTGGTTGTCGTAGAGCGACTGAACCTCGGCAAGGTCGGTCTTAATCTCCTGATAGTCGGCCGTGTCGAGGTCGGCCAAGAAGATGGAACGTTGCACGCGCGTG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACGAGTGCACCATCCATTAAAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 106966-104815 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG740072.1 Prevotella sp. oral taxon 317 str. F0108 supercont2.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 106965 37 100.0 36 ..................................... ACTGAAGCTAACAGCTTTAAGAAAGAGTGTTTGGAG 106892 37 100.0 36 ..................................... TATGCTGGCAAATGGACATTGAGTAGCTCACGAGCT 106819 37 100.0 36 ..................................... ACTCACAATATGGAAACAGCGTATGCTTCCATATGT 106746 37 100.0 35 ..................................... TTATTGACAAGAAAGGGCAAGTCTATACAGGCTAA 106674 37 100.0 36 ..................................... GGCATAGGTTTTTTAAGGGGCTAACATAGTGTTTGA 106601 37 100.0 35 ..................................... TCGAGTTTACGCTGGTAAATGGTCTCTAAAAGAGA 106529 37 100.0 37 ..................................... TTAGTTTTGTTTCATCTTTTCTAGGTGAGTGGCCATT 106455 37 100.0 36 ..................................... AGAAGTAATCTTAGGATGAAAATGTGAGCACTAGGT 106382 37 100.0 36 ..................................... CAAACTTAATATCTTATAAAGCTCCCAAAAGCAATG 106309 37 100.0 38 ..................................... TGGATAAGGATAGTGTTAGACTGATATAATGTCCTTGT 106234 37 100.0 35 ..................................... TCGGCATACAATTGGACTGGAACAATTGGTATGAA 106162 37 100.0 38 ..................................... GGAAAACCCAAAGGCTATGATGGTTCTTCTTAGTGGTG 106087 37 100.0 34 ..................................... TTATGACAATTCTTTGGACATATTCTTTTTCAGA 106016 37 100.0 36 ..................................... TAGATTATCCTCTGATGATAGTGGAGTTTATTCTAT 105943 37 100.0 37 ..................................... ACTGAATTGCAGGTATTCTGCCAATATCAGTTTGTAA 105869 37 100.0 36 ..................................... GGTGTTAACGTAGTTAGTCTTGAAAATTATGACAGA 105796 37 100.0 36 ..................................... TTTTAGTTATTTATTTCCAATAACAATATTAGTAGA 105723 37 100.0 37 ..................................... TTTCTATTAAAGGGGTAATGGGTTTAAGCTCTTTGCA 105649 37 100.0 39 ..................................... GCCATATGAACTATTTATTATCAAATTTTCAAATTAAGG 105573 37 100.0 33 ..................................... TTAAAGTATATGAAACAAATAAAACTCTTAGAA 105503 37 100.0 37 ..................................... CATATAAATTCTTATATAATATAATACGTACGCGCGC 105429 37 100.0 34 ..................................... GCAAGAAATTATACAGAATAGAAGCCTTGCGTGA 105358 37 100.0 35 ..................................... TGTTACAGAGAGTGAATTTGAGAGTGTGAAATCTG 105286 37 100.0 35 ..................................... ATCGCAGAAATCGAGGATAACGACAATTGGAATGG 105214 37 100.0 35 ..................................... AATCTGATGCAGTGTACAATTATGGGCGATAGTAT 105142 37 100.0 34 ..................................... TTGTACAAACAGACGAGGAAGACGAAGACGAATA 105071 37 100.0 36 ..................................... CCAAAAGCGGGCTTATTAACGGCATTGCAAAAGGTA 104998 37 100.0 39 ..................................... AACCGACACACTTCCAACTCCTTACATAGGTGTTGAAAC 104922 37 100.0 34 ..................................... AAATTAGTTCTAAGAGTGCAGCAGAGGTTAAAAG 104851 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 30 37 100.0 36 GTCTTAATCCTTGTTGTAATGGATGATGCACTCGCAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTATATGAAATCTGGGGGAATGA # Right flank : AGCAAAACTTGGGTTATGCTTTGTTTAAGCGCATTGTAAGACTTGTTTGTGCATCGTAAGACATGTTTTTAACAAATATTACGTACCTTTTAAGCGAGTGCAAAATTACAAAGAATTGACGAAACTGGCAAACATATCACGTTAAAAAGCAAACTTAACGAAAGTATCGCCAATAGTGCGGAAAGAAAGGAGAAACAAACGAAATGGCACACTTCGGCTTATCTATCGTCAAGCGATGTACACAGTTGCTGGGCTTTTGCTATTGCAATATGTCTTAATCCCATGTCTTTTGTATCATACGCGCACGCACGCGCGCGTACCTATTATTATATAGAGGTGACAAGTTAACGAGTAGACAAGTTAACAAGTGGACGAGGTGACGAGGTGACAAGTTAACAAGTGGACAAGTTAACAAGTGGACGAGTTAGCAAGTGGACGAGTTAGCAAGTGGACGAGTTGATGCGAGAACAAGTGGACGGGTTAACAAGAAGACAAGTAAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTGTAATGGATGATGCACTCGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 3 109661-107958 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG740072.1 Prevotella sp. oral taxon 317 str. F0108 supercont2.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 109660 37 94.6 33 ......GC............................. TAATAAAAAAATCGGGTCGAAGTTCCAAAAAGC 109590 37 97.3 35 ............................T........ GTAGATACTCTCGCGCTTTCGATGACTGGGAACAG 109518 37 97.3 36 .....................T............... CGTATCATTTAGCCGTTATGGGTGATAGAGCACAAG 109445 37 100.0 38 ..................................... GCAGTCTACACATTGCATTCACCCGCATGTAACATCGT 109370 37 100.0 37 ..................................... TCAGAAAGTCAACGAAGAGTTGGAAAAGCACATGCGC 109296 37 100.0 38 ..................................... ATCTTCGGTAAGTATCATGCAACGTCTTTCTTTGAGAG 109221 37 100.0 35 ..................................... ACATTCAGGAGTTATGAATACGACAGAAAAAACCG 109149 37 100.0 36 ..................................... TTTCATGAAATCTAAAGAAATTGCTGGAGAATATGA 109076 37 100.0 36 ..................................... AGTAAGGAGAATGTAATCTGAGGTAGCGTAACACCT 109003 37 100.0 36 ..................................... TACTATCGTGGCTACCACGAAGCTGATGCTTGGATG 108930 37 100.0 35 ..................................... ATAGCCATATGAACTATTTATTGTCAAATTTCAAA 108858 37 100.0 38 ..................................... CCTTATAAAGGTTCTGAAAAAAAGAAAATTGCTTGGTG 108783 37 100.0 34 ..................................... TTTGGCTCTGCGAACTCTTATGTATTATCATCGA 108712 37 100.0 35 ..................................... AATGTGGTTCGTCCTATTGTAGCAAGAAAAGAAAG 108640 37 100.0 34 ..................................... TGCCGATAAGTTCTAAATATTAATTATTTAGAAG 108569 37 100.0 26 ..................................... CAGCAGCTCCAGCAGCTCCAGCAGCT Deletion [108507] 108506 37 100.0 38 ..................................... TCTCCAGACCAAGCTATGGAGAGACATGTATTCCATAG 108431 37 100.0 37 ..................................... AAGAACCTCGTAGTACGAGGCGTTAATGTAGTTAGTC 108357 37 100.0 36 ..................................... ACTGCTATTTGGTCATCTACGTTCGGGTTCGAACTA 108284 37 100.0 36 ..................................... ATTGAGCAATGGAAAGAACATCACGATTAACAGATT 108211 37 100.0 34 ..................................... ACAAGTTTATTTCTCGACACGGATTCGTTAAGAA 108140 37 100.0 38 ..................................... CAGAACTACAAGTATTCTGTCAGTACCAATTTGTAACC 108065 37 100.0 34 ..................................... AACAAATTCAACAGACTACAGGGTCGAAGTTAAT 107994 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 24 37 99.5 35 GTCTTAATCCTTGTTGTAATGGATGATGCACTCGCAC # Left flank : TTTAGGGGCTAAAAAGTGGGTAATTGGACGTGAAAAATAATGAGTTGGCAACCAAACTAGAAAGCCCAAATGGTGCAAAATGCAGGTTATTTTCTTTAAAACAGACAAAGCAGAAGAAGTGGAAGGCTACAAAAAGTGCCAATTTACCTACTTTTCAACCTAAATTTTCGCTAGAACGGAGTGAAAAACAGAGCACTATTGTAAAATAAAAAAGCAACAATTTAAGTTTTTTGAGTTGGGGAGGGTGTAAGTTGGGGAGGTTGTGAGTTGGGGAGGTTGTGAGTTGGGGAGGTAGTAAGTTGATGAAGTTGTGGGTTGGTGAGTTGATGAGATAGTGAGTTCGTGAGTGGGTAAGGTTGTGAATTGGTGAGGTGGTGAGGTGATGTATTCGGGAGTTATTGGGCTTTCGTGAGTTTATAAGTCAGTGAGTCCATCCGTCCTACACTTCGTATACGAAAGACGTCTTTACCTTGTATCGGCACAAGAAACCCACTTGAATT # Right flank : ATAAAAAAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTGTAATGGATGATGCACTCGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //