Array 1 278471-278960 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBBB010000003.1 Clostridium botulinum strain KM123 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 278471 30 100.0 36 .............................. GTTAATGTATTTTGCATTATATTTGCATTATTAATA 278537 30 100.0 35 .............................. CCTTCTTTCTAAGCACATTTTATAAGTGCTTTATT 278602 30 100.0 34 .............................. GTGTTAGGATCATATGCACCTATAATTTCTTCTT 278666 30 100.0 36 .............................. AAGTAAAAAGATTAATAAAAAAAAGAGAAGAATAGT 278732 30 100.0 38 .............................. TCTAATACATTTTTATATGTTTCATTATCAGTTTGTAT 278800 30 100.0 35 .............................. TCTATTTCTTTGTTTGTATTTTCAATGTTTTTCTC 278865 30 100.0 36 .............................. TCTTTAATCTTATTAAATATTTTTTCTGTTTCTTCC 278931 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 100.0 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AATCATCGGGAAAGCTTTCTGGAAAATCTTGATATTCCAATGGGGATGTGCTATTTTTAATTTTAAGGAATATTGATTTTACAGTGGTTGAACCTTAACATAGGATGTATTTAAGACTAATTTTCCTAACGTAGATATAATACCATTCACCAAGTTGAACCTTAACATAGGATGTATTTAAGATAAAAAAATGAAAAATATGAAGCATATTTAGTATTGTTGAACCTTAACATAGGATGTATTTAAGCAGGGAACTCAAATTTACAATTTGGTGTGAGTCACTTACTCCTTGGAGAATAAGAGAAGGAGTTTTATAAATTGAATCTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGTCATTGATATATAAGGCTTAGGATAGGTTTTATTTTATATTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGCAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : TACTATTCTCCTCTTGTAGCGGGAGTTCCTATACCTGTTGAACATTTAATTTCCTTTTAGGTGCAATTATTTTTGGGTTATTGACTTGTAGTCTAAAGCTACACCATAAAAAGGTTCATTAAACACATGTGGAAGAACAAGTAATAGATACAGCACTTGCTATTGATGCGGTGAATTGTATTACAAATAACTAAGGTTTTATTTAAAACTGTTCATATGGCTGGATTTAAGAAATATAATAGTGTCCTAAGTTGTATCATAACCTAAGTAATTTATAAGAATATATGTTTATATTTATTTTAAGACTATTGTATTAATATGATCTATCCAGATTTAATTGTGAGAAATTTCATTATAAACTTAATAGGGAAGTCTTAGATTTTTTATTGCATGAGATTGTACGGAAAATATTAAATTTCACTATAACTTAACAAATGATTGATACAATTTTAAAAAAATCAGGACTTACAATGATAAAGTAGGTCCTGATTTTTATTAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 298125-298284 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBBB010000003.1 Clostridium botulinum strain KM123 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 298125 30 100.0 35 .............................. ATCATCTTCATTAATTGATCTATATTAATTTGTGC 298190 30 100.0 35 .............................. TTGCTTTTTATAAAAGTATCTAGTTTTTTATTTAT 298255 30 93.3 0 ............................GC | ========== ====== ====== ====== ============================== =================================== ================== 3 30 97.8 36 ATTGAACATTAACATAAGATGTATTTAAAT # Left flank : TATATATCTAATTAAATTTTTCCAAGTGAATTTAAAATTTAAACCTATTTTAGATATTGAAACATAAGGATTAGAATAGGTTTTTATTATGTATTTATGAAAAATAAGAATCGGTTGGAAAACTTTCTTTTAAACCTTGTAAAATCAATAGGTATATGATATTCTTGAAAATAAGGAATGGCTATTTTACTATGGTTGAACAATAACATAGGATGTATTTAAGCAGAGAACCCAAACCTCTGATTTATCGTGAATGGCTTACTCTTTTGAGAATGGGAGAAGAAAGAGTTTCATTAATGAGTATAGAGTATATCTAATTAGATTTCTCCAAGTGAATTTAAGTTTAAGACCTATTCTAAGTACTGATATATAAGGCTTAGAAGAGGTTTTTATTATGTGTTTATGAAAAATAGGAATCGGTTGGGAAAATTTCTTTTAAACCTTGTAAAATCAATGGGTGTATGATATTCTTTAAAATAAGGAATGGCTATTTTACTATG # Right flank : CAGAGAACCTAACTTTACGATTTGGAGTAAGTTGTTTATTTCCTGTAGAGGAGAAGTATGAGTCTCATTAATGAGCATAGTATATATATCATATCTAATTAAATTTTTCCAAGTGAATTTAAATTTAAAACCTATTCTAGCCATCGATATGTAAGGATTAGGGTAGGTTTTTATTATGTATTTATGAAAAATAAGAATCGGTTGGAAAATTTTCTTTTAAACCTTGTAAAATCAATGGGGATATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATGGTTGAACATTAACATGAGATGTATTTAAACGCTATTGTTATATCTCCATTAAACAATCGTAAAATAGGTTGAACATTAACATGAGATGTACTTAAGCAAGAAATGCAATCATCTGATTTAGAATAATCATTTATACATGGCAATAATTTTTTGCTTTATTACTTCTTGAGTTAAATTGTGGGATTTTATTGACTAAAATATTTTTCAAAATTAGTTTTA # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //