Array 1 76777-76415 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024505.1 Bacillus cereus strain HT18 plasmid pHT1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 76776 30 100.0 37 .............................. TGTATAGCGACAGATAATTCATTCGTCTCAGTATTTC 76709 30 100.0 37 .............................. TGTATAGCGACAGATAATTCATTCGTCTCAGTATTTC 76642 30 100.0 34 .............................. ATGTATTGTTTTTATAAGGCGATAAGAGAAACTG 76578 30 100.0 37 .............................. TATTACCCACAATATATTTTGCTCCTTTCTATTCCTT 76511 30 96.7 37 .........A.................... TGGGGAGACGCTCGGCACTTCACAAAATCATTGCGAA 76444 30 73.3 0 ...T.....AC..G......A...A.G.G. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 95.0 37 GTTAAAACATAACAATAGATGTATTGAAAT # Left flank : TGAAATTGATCCACCTCTACAATGTGATAACGGCCATTATCCGTTAAAACATAACAATAGATGTATTGAAATTTAAGTCATTATATGACACCGTATGCTATGTGGATTGTTAAAACAGAACAATAGATGTATTGAAATCAAACAAGATTACAACTATTGAACAATGTCGTCAATCGTTAAAACAGAACAATAGATGTATTTAAAAAGATAACAAATCATTAAGAAACCCTGGTTGCAAGAGTGTAAATTATTAAATTTTTGGTGAATTTCCACGCCATAAATGGAGAAGTAATACAAGGTGAATTTACCAAGTGTCAACGCTCCATAAGGTAGTATCGAATGTTAAAAAAACATTGATACATAAGCATTTTGGATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGAATATTGTTGATATACAAGGGGTCATCGCAAAATTCATTGTTAATCATCCATATATTATTGGG # Right flank : CTCATTGAACTTTGATTCGATTTGTATATAAATAGAGTAAATGTTATTATATAAGTAATCCAATACTGAAAAAATCATATTGCAAAAGGACACACCTACGCATAACCATAGCGTAGGTGTGTCCTTTTTTTGTTTAAGGAGGAAAAAGTTATGGGGAAAACATTATTTATTGCAGAAAAATCAAAAGTGGCCAATGAAATTATGAAATCGCCACGATTCCGTCACTCACAAAAGTACATTGGTAGCAAGCCTTATTATGGTTATTATGAAAATGATCATTATATTGTCAGTTGGTGCCGTGGACATTTGCTGGAACTAAAAAATCCGGAAGAGATGGATCCAGAGTATAAAATGTTTAAGTTAGAACATTTACCTTTAATTTATCAGCCAGCTTATAAAGTGATACAAGAAAATGCTGAACAATTACAAATCCTTGTTAAACTACTGCAACGTCCTGATGTTGACCATGCGGTGAACGTATGTGACGCGGACCGAGAGGG # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:0, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAACATAACAATAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 2 77301-77072 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024505.1 Bacillus cereus strain HT18 plasmid pHT1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 77300 30 100.0 36 .............................. TGATCCACCTCTACAATGTGATAACGGCCATTATCC 77234 30 100.0 36 .............................. TTAAGTCATTATATGACACCGTATGCTATGTGGATT 77168 30 96.7 37 .........G.................... CAAACAAGATTACAACTATTGAACAATGTCGTCAATC 77101 30 90.0 0 .........G...............T...A | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 96.7 37 GTTAAAACATAACAATAGATGTATTGAAAT # Left flank : CCTATACAAGTCAACGATGTAGTGAATGTGGGTATATCCATAAAAATAATCGGCAAAATCAATCTACCTTTGAATGTCAGCAATGTAGTTTTAAAGTTCATGCAGACTACAATGCTGCCAAAAACATTTCTGTGTACAATATTGAGAAGGTAATACAAAAACAATTGAAGTTACAAGAAAAATTAAATTTAACAAAATATAAAGAACAGTATATAGAGCAGATGGAAAATATTAATTAAATAAGGTAGTAGGTAGTAGTTTGGCGGATTTCCACGCCATAAATGGAGAAGTGATACACGGTAAATTTACCAGGTGTATACGCTCCATAAGGTAGTATCGAATGTTAAAAAACATTGATACATAGGCATCTTGAATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGGATGTTGTTGATATACAAGGGATTGTCACAATATTCGTTATTAATCATCTATCTATTATCGGG # Right flank : AGATAACAAATCATTAAGAAACCCTGGTTGCAAGAGTGTAAATTATTAAATTTTTGGTGAATTTCCACGCCATAAATGGAGAAGTAATACAAGGTGAATTTACCAAGTGTCAACGCTCCATAAGGTAGTATCGAATGTTAAAAAAACATTGATACATAAGCATTTTGGATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGAATATTGTTGATATACAAGGGGTCATCGCAAAATTCATTGTTAATCATCCATATATTATTGGGGTTAAAACATAACAATAGATGTATTGAAATTGTATAGCGACAGATAATTCATTCGTCTCAGTATTTCGTTAAAACATAACAATAGATGTATTGAAATTGTATAGCGACAGATAATTCATTCGTCTCAGTATTTCGTTAAAACATAACAATAGATGTATTGAAATATGTATTGTTTTTATAAGGCGATAAGAGAAACTGGTTAAAA # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAACATAACAATAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //