Array 1 8925-4440 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKOU01000032.1 Aeromonas caviae strain GEO_47_Up_A NODE_32_length_41096_cov_7.73822, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 8924 29 100.0 32 ............................. GCCGCCGTGACAATCCGTACCGTGACCCCTAT 8863 29 100.0 32 ............................. AACTTCGACGGTTCCGGCGCCACGGCGATGAC 8802 29 100.0 32 ............................. AACCTGGGGGCTCGCCCGCAAGACTTTATCGA 8741 29 100.0 32 ............................. AGCGCCACCGTCACGGCGATGGCCTTGCTCAG 8680 29 100.0 32 ............................. CCTATGGCGCCTCCATTATCGAGGAGGCGAGC 8619 29 100.0 32 ............................. CTGGTGATTCGCCTGGCGCTGGATCTACACAA 8558 29 100.0 32 ............................. TTCACTCGGCGAGAAAGGAACATCCCATGTTT 8497 29 100.0 32 ............................. GAGGTGAAAACCGGCGGCGACTTCAAGGAGAT 8436 29 100.0 32 ............................. GAGATGTAATAGCCCAGTGCAACTTGGGGGTT 8375 29 100.0 32 ............................. GCCTCGTCGATGCTGTATACCTCCACAGCTGG 8314 29 100.0 32 ............................. CCCGCCAGAAGGTTTACACCTCCATCGAGCTG 8253 29 100.0 32 ............................. CGTCATTTTATGTTGCCTCACTGAATGCGTTC 8192 29 100.0 32 ............................. TTGGCGACCTTGTGCGCTTCCCCGGACTGGCG 8131 29 100.0 32 ............................. GTCGGCCTCGTAGGCTTCCCTGGTCTTCAGCA 8070 29 100.0 32 ............................. GCGACCGACTCCTGCATCTTGGTTTCCAGTGT 8009 29 100.0 32 ............................. CGTCATTTTATGTTGCCTCACTGAATGCGTTC 7948 29 100.0 32 ............................. CGTCATTTTATGTTGCCTCACTGAATGCGTTC 7887 29 100.0 32 ............................. TTGGCGACCTTGTGCGCTTCCCCGGACTGGCG 7826 29 100.0 32 ............................. GTCGGCCTCGTAGGCTTCCCTGGTCTTCAGCA 7765 29 100.0 33 ............................. GCGGACACGGCCACCAACCAACTTGGTGGTGGC 7703 29 100.0 33 ............................. TACCGAGTGATCTACGCGGACCCAGCCTGGCAA 7641 29 100.0 32 ............................. CCGTAGTTCGCCAGCCGCTTCAGCTTGTTGAC 7580 29 100.0 32 ............................. TCCCACGGGTAAACGCATCGGGCCGCTGGGCG 7519 29 100.0 32 ............................. GATCTGGCTTCCTCCGAACCGGAGAAGGCCCG 7458 29 100.0 32 ............................. CCTGGTGCGAGCTGGATCCCCGCCGATGTGAT 7397 29 100.0 32 ............................. ATCCTGACCTGGGGCGTTATCTCCGGTGGCAC 7336 29 100.0 32 ............................. CACGTTCTCTCCGCCGCCCTGTACCAGCAGGA 7275 29 100.0 32 ............................. CGTTGGCGCGGGCCTGGTCGAATTGGGGATTG 7214 29 100.0 32 ............................. ACCTGGTTCTGGCAAGACATCTACAGCCGCAA 7153 29 100.0 32 ............................. ATCACCAAGATCCTGGCACCGTCCGTCAACGT 7092 29 100.0 32 ............................. GTTGAACGGCAGGGCCGGGTCGATGCTCTGGT 7031 29 100.0 32 ............................. TCCGTGGGCTGCGTGATGTTCATGCTCGACAT 6970 29 100.0 32 ............................. GCGCTCAGGGTGCTGGTTGCTGCACTGGATGA 6909 29 100.0 32 ............................. GTGATGCACATTTCTGCATTACTGCCGACCAC 6848 29 100.0 32 ............................. GCAAGCTCGGTGGCGATGGTCAATGGCGCCAG 6787 29 100.0 32 ............................. ATTCGCTAAATGGCACTTGAGCCGCCAGCCTT 6726 29 100.0 32 ............................. ATCTGTACACACTCTTTTCCGAATACCCGCTG 6665 29 100.0 32 ............................. CCTTTCTCCCAGAGCACTTCGAAGCAGGTTGT 6604 29 100.0 32 ............................. GACATTGAGCAGATCCGCAATGAGCTACACCT 6543 29 96.6 32 ............................A GGTTCTGTCCGTGGTCGCTAACGGTATCATCG 6482 29 100.0 32 ............................. CCCTGGGAGATGGCGTCAAATTCCGCCTCCAT 6421 29 100.0 32 ............................. TCCTGGATCTGGTAGCCCGCTTGCTGGGCCTT 6360 29 100.0 32 ............................. GTCGCTTGGCCCAGCCATTCTGCACAATCAGC 6299 29 100.0 32 ............................. CGCCCGGTATCAACAGGGCTGGCCTTGATAAC 6238 29 100.0 32 ............................. GTGATATGCTCGCCAGTCGTCTGCTGGTACGC 6177 29 100.0 32 ............................. TGCGCAACCCTGGCGTGCTGATGTTGCGCGTC 6116 29 100.0 32 ............................. GGCGCCACTGCCTCCGTAGTGCTGGCTACAGT 6055 29 100.0 32 ............................. CCCGTTGCCGAACTGCGCCAACAGGCCGAGCT 5994 29 100.0 32 ............................. ATTGCCCAGACCTTCCTCGGGGTGACACTGAC 5933 29 100.0 32 ............................. CTGGATCTGGTCAGCGGCGTCAGCCGCATTCA 5872 29 100.0 32 ............................. CAGATGAAAGACGGGCAGGGGCGTCCGCTCTG 5811 29 100.0 32 ............................. GCGACATGCTGCGCTGACCCTGCCTGTGCATC 5750 29 100.0 32 ............................. TCGGCAGGCGTGACCAGCGGCTGGCCGCCCCA 5689 29 100.0 32 ............................. CGCGGAGCATCCAGCTTCTATGGCCCGCGTGT 5628 29 100.0 32 ............................. AGCTGGCCCGAATGGGGCTTGAAGAGAGCAAC 5567 29 100.0 32 ............................. GTGGCGAACCGTAACAGGGGGCCGAAGAAGGC 5506 29 100.0 32 ............................. ACTGGATTCGCCGCCATTTCGAGGCATGGCTG 5445 29 100.0 32 ............................. CACCCGAAGGCTAAGCAAGTGGTGGCGAAGGC 5384 29 100.0 32 ............................. TGGAGAGCTCAGGCAGCTCATCGCTTACCAGG 5323 29 100.0 32 ............................. TTGGTCTGGGTGCATTCGTAGTTCTGGTCGTA 5262 29 100.0 33 ............................. TCTGCCTTGCTGCGGGTGATATCGTTCTCTGGC 5200 29 100.0 32 ............................. CGTGGTCAGGTCGGCGGCAGAGGTGTCTGGTG 5139 29 96.6 32 ............................T GACGGCGGTTACGATGATTGGATCCGGATAAT 5078 29 100.0 32 ............................. GCTACTACCTGCAGATCCTGCCGGCTACCGCC 5017 29 96.6 32 ............C................ GTGGTATTGCAGTTGTGACGTGGGGCGGCCCG 4956 29 96.6 32 ............C................ AGATGGCTAACACCCTGACCGGACTTATCCCG 4895 29 96.6 32 ............C................ ACGTATTCGCCAAGGTTAGCGTCCCAGACCTT 4834 29 96.6 32 ............C................ CCGTGAGTAAAGCGGTCACTGTAGAATGAGAA 4773 29 96.6 32 ............C................ TGATCACGACCTACACATCCCGTGACGCCGAG 4712 29 96.6 32 ............C................ TTCATTGTTCGGGCCAGAGAGCTGGTCGAGCT 4651 29 93.1 32 ............C...............C AGACAAGGCGGCATCGATGCGATAAAGAAGCC 4590 29 96.6 32 ............C................ CCTGCTGTCGTGGCGGGTGAAGTCGCCGCCGC 4529 29 86.2 32 ........T...CT.............T. TGGAACCAGACGTTCAGGTCCAGCATCAAGGT 4468 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 74 29 99.3 32 CTGTTCCCCGCGTCCGCGGGGATGAACCG # Left flank : CCGCTTATCGAGGAGGTGCTCTCGGCCGGGGGCATCACCCCGCCAGACGCCCCTGCAGATGCCCAGCCGCCCGCCATCCCCGAACCCGTCGGCATGGGGGATGCCGGTCACAGGAGTCAGTGATGAGCATGCTGGTGGTGATCACCGAGGATGTGCCGCCGCGCCTGCGCGGCCGGCTCGCGGTCTGGTTACTCGAGGTGCGTGCCGGTGTCTATGTGGGAGAGGTGTCGCGCCGGGTGCGAGAGATGATCTGGCAGCAGTGCGAGGCTTTGGTGGAGCAGGGCAATATCGTGATGGCCTGGCCCGCTAATAACGATTCTGGTTTTGACTTTCAAACCCTGGGGACCAATCGCAGGGTGCCGGTGGACCTCGATGGTTGCCGATTGGTCTCTTTTCTACCCATTGAAAATCAATAGCTTAGCGTTCATTAACAATCTGGACTAGTCGGTGGCTTTTTCATGGTTGGAAAAAGCCATAAAAATCAATAGCATATGTTAAGT # Right flank : AATCTCTTCGGCATGGCATGCTCTCGATTACGTGCTAGGGTAATCGTTCTGGCTGTCATTGTTTGATCAGCAGCGAGAGCTGATAGCGGACATTTTCTAACAGAGCAGCTTTAATTTGGCGCGTCGGGTTTCGATTTTGGGTGTTATCTGATCGCGTGTGTAATCACCCGTAACGAGACAAGTGAATTTTTTGACGAGCATTGAGCGGCGGATTTACACGCCTGCGGCTTTCCCACTCAAATCACCATGATCATTACCAACCCTAGACAGGACGTGGCTTTGCTAGTCGCCAGCCTTCTAGGGATAGGTGATCAGGTAAGGCTGATCTGATCAGATAAAGTGATCAGATCAGGCAACGCTGATCTGATTCCCCGATCACTTCCGGTGATCACTTCTCAGATTTTTTCCAGATACCAACCCCATGGCTCGTTTTGAAAACCTGCTTGGCATGAGATGAACTGCCAGCCAAGGTGGTACAGGTCATTATTCAAACGCCAAAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGTCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCGTCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //