Array 1 8697-11506 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPBL01000016.1 Campylobacter concisus strain AAUH-7UCil 1101069, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 8697 30 100.0 36 .............................. GCGTTCTTTCAAGTAATGCTTTGGCTGCTGGTATAA 8763 30 100.0 38 .............................. TCGTTTCTACTGTTCTGATAAATGAATTATATGTTGGA 8831 30 100.0 37 .............................. AACACAAAAATGCCGATTTTAGTAGCATAGATCACAA 8898 30 100.0 36 .............................. TTTTTTGAAGTGTCTTTGAATATGTCTGGAAAATCA 8964 30 100.0 35 .............................. TTGTCGAGGGCGAAAAAGACTGCCTAAACGCTCTA 9029 30 100.0 37 .............................. GGATTGTTGAGATGGTGACTTCGGTGTTCCCATATCA 9096 30 100.0 35 .............................. GTAGATTGATCGATTGTATTGTTTGGCTGCTAAAA 9161 30 100.0 36 .............................. GCAAAAAAGATTTTAAAAAAAATTTTCAAAAAATGA 9227 30 100.0 38 .............................. GGGTTTCCTTGTATAGCTCAATGGCTTTGCGCATAGGA 9295 30 96.7 36 ...G.......................... AACAATCTCAAAAACTTGTAAAAAATAGCGTTGTTA 9361 30 100.0 37 .............................. GCTTTTGTTGTCCCTATTTATGCTTCTTTTGTGGCTA 9428 30 100.0 37 .............................. AAGAAAAGTCATAATTGATAGTTTCGGTTGATTTGAA 9495 30 100.0 36 .............................. TCATACTCTAATGAGCAATAAAGACAAGCTAATGCA 9561 30 100.0 38 .............................. ACGGTACTACTCAAGGCGGTTGCATTGATTGTTCTTCA 9629 30 100.0 37 .............................. CCAGCCGTGATAGTTGCGTCGGTGTTTTTTGCACTCA 9696 30 100.0 36 .............................. AAAAATGTTCTTGGCTATGGTCTAAGTAGTGGTTTA 9762 30 96.7 36 .........................T.... GGTTGTAGTTTTGATTATTTTGTAAAGAATTATGGT 9828 30 100.0 36 .............................. TAAAAAATTGTGATGTCGTAATTATCCCTTGTTTGC 9894 30 100.0 37 .............................. AGTTTTTTTGAAAATTACAAAGAGGAGTAATAAATGA 9961 30 100.0 37 .............................. AGGGCGATTGAGAACATTAAAACTCTCGAAAGCCTTT 10028 30 100.0 36 .............................. CCTTCAAACTTACCAGAAGCTGAACTTCTTACAAGA 10094 30 100.0 36 .............................. AATTTGCTAGCTTTTGCTTTGCCTCGTCCATATCAA 10160 30 100.0 37 .............................. TTTATTGACGGCATTGGACTAATGGGCGAGGTCGTTG 10227 30 100.0 37 .............................. TAGTGAGAATGTGTATCTGAAAAGCCGCCCCAACCTC 10294 30 100.0 34 .............................. TGGAGAGCCTGCGCTTGCTTCACTTTTGCCTTTG 10358 30 100.0 37 .............................. ATGAAGTGGTAAACGAAAAAACAAAACATTTGCTCTA 10425 30 100.0 35 .............................. TAAAATTTGCTCTAATATGCCCCTAAAAGGATATA 10490 30 100.0 36 .............................. TCGCACTTGCTACAAGTCCAGCTGTGTTGTTATCTG 10556 30 100.0 35 .............................. TCCCACTGGTCGCACTTTCTAGCCCTTAGAAAAAT 10621 30 100.0 36 .............................. TTTTGCTTGAAGCCAAAGCATTTTTTGTCAGCGATT 10687 30 100.0 39 .............................. TTTGCGATAGACGATACAAAAGACGCCGACGCTACAAAT 10756 30 100.0 34 .............................. TGCAAGTAGTCCGTTTTAACCTGCCATATATAAA 10820 30 100.0 35 .............................. ATTGATTTGCTAGATGAGTTTTATACAGTATCTAT 10885 30 100.0 35 .............................. TCCTTTTATAACTTTTTCATAAGTTGCCTCAAAAA 10950 30 100.0 37 .............................. TTGACATCTTCAACAACATAGTTTTTCAGGTCAATAC 11017 30 96.7 35 ......................C....... CTAGCTCTTCAAATCCGCTAAATTTAAGCACATCA 11082 30 100.0 35 .............................. TAAAAACCCCTATTCAAAAATCATCAATCGATATT 11147 30 100.0 35 .............................. AAAGATTAAAAGCTTGTGTGTAGTTCATTTTTCAT 11212 30 100.0 36 .............................. GCGACAAGATGTTTTTTATTTTGCCTATCGTATCGA 11278 30 100.0 34 .............................. CTTGATACTTTGAAATTACCATATTCAAAACCCA 11342 30 100.0 38 .............................. TTGTTATGTCTATGTTTGAAGTTGAAAAGCCTGATAAA 11410 30 100.0 37 .............................. CCTGAAAGCGTGCAGACTGGCACATTTATGTTTTTAG 11477 30 86.7 0 ....G.........T..........T...T | ========== ====== ====== ====== ============================== ======================================= ================== 43 30 99.5 36 ATTATAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTTCACCTCGACCTTGCGGAGATTTTTAAGCCGATCTTGGGCGACACGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCCGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATAATCTCACGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATAAGCTTAAAAAGTGCATCTGCGAGGACGCGCCTTATGAAGGCTTTAGGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTGGGGCTTGGCGTATTTGCACATGGCTAAATTTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACTAGAATGCCTACAAAACAGGCTTTTTGGTGCTA # Right flank : TCTTAAAAAAAGATATCCTTAAGCAAAAAGCTTAAAATTAAACTTTAAATTTAGTTTGATATATTAAATTATTAACATGAGTATTGATATTTTAAAATATTTCTAAAGGAGTTGGACCCAAATATGGGCCCGAATAAGGTAGTTATAGACCTTCAAAAGGGTTTGAAACTACGTCTTTGCGATCAACTATGTAAGGTATGATAGCTGCGTGGCGAGCTCTCTTGATTGCTTTTTCTACCATCTCTTGGTATCTTTTTGAAGTGCCAGTTAGGCGTCTTGGCATGATTTTAAATCTCTCTGACAAGCAATACTTTAAAAGTGAAGTATCCTTGTAATCTATAAAATCAATTTTTGCTTCTGTAAATTTGCAATATTTGCGTGAATATTTTCTTTTTTCTGCCATTTCTTTATCCTTTAAAATTAAAACGGTATTTCGTTATCGCCTTCAAAATTGTCAGCGTCAACATTTATATCAGGGATTTTTTCTTCATAATACTCTT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //