Array 1 103038-102202 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRGY01000017.1 Streptococcus pyogenes strain SST2229-1 Contig_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 103037 32 100.0 34 ................................ TTTTTGGCTTCGTTGTGTAACAAATCCAGTGCGC 102971 32 100.0 36 ................................ ATCGAATTAACAATTATTGCTTGATAGTAAAGTATG 102903 32 100.0 36 ................................ ATAACCAAGTTTTGTATAAATATCACAATCAGTCTT 102835 32 100.0 35 ................................ AGATTCGGCTAGATATTCCAAAAAATCGATAAAGC 102768 32 100.0 34 ................................ TATATAGTCAGCCACATACTGCGGTACTTCTGGT 102702 32 100.0 34 ................................ TAAATCACTAGTAATTGTATATTGTAATTTCACG 102636 32 100.0 36 ................................ TGCGTTTGTTGTTGGATCCTGCGAAAAAGATATCCC 102568 32 100.0 37 ................................ ACCAACTTGCTTTCCAATTTATCAATTTGGAGATAAG 102499 32 96.9 35 ..............A................. ATGTTATTTCTCCTCGATCTCGTCCAAAAGTCTTA 102432 32 100.0 34 ................................ TTTGGTTTAAGCTTAAGATTCACTACTCAATAGA 102366 32 100.0 35 ................................ GAATAACTCTCCATCTTCATCAAGTGACGGTTCGT 102299 32 100.0 34 ................................ ATTAGCACTGGTTATATTAAGTGCCGAGGAAAAA 102233 32 96.9 0 ...............................G | ========== ====== ====== ====== ================================ ===================================== ================== 13 32 99.5 35 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCGATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAACACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : ATGAACCCGATCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGAGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCCTTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTTTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGATAAAAAACTCTATTGGTATGGCATTGTCAAAACCTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTACA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //