Array 1 1106995-1104324 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABEIR010000002.1 Streptococcus lutetiensis strain NCTC8746, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1106994 36 100.0 30 .................................... CATATATACTTTCCACTTCATAATCATATG 1106928 36 100.0 29 .................................... TCCCGTGGCAACAAGCGGGCTCGCTTGAG 1106863 36 100.0 30 .................................... AATCTCAAGCTCAAGATAATCACCCCAACT 1106797 36 100.0 30 .................................... GACCTTGGCAAACAGACTTTGACGCTATGG 1106731 36 100.0 30 .................................... ACAGGGAATATTGCAACAACTCATAAGACA 1106665 36 100.0 30 .................................... CGCCTGTTGCAAAAGGTAATTATTTGATAA 1106599 36 100.0 30 .................................... AACGTTATCCGTATTCAAGAAATCAATGGA 1106533 36 100.0 30 .................................... AATGGGAGCGAGGTCTGCATTACCCAGACG 1106467 36 100.0 30 .................................... TTAGTGATAGTTCCCGTGACTTTCTCTTTA 1106401 36 100.0 29 .................................... TTTTCCAGAAAGTGGAAGGTCATGCTCTT 1106336 36 100.0 30 .................................... TTGATGTTTTGAATAAGATTACTAAAACCA 1106270 36 100.0 30 .................................... AATAGTTGTAATTCCTAAAACAATCGTAGA 1106204 36 100.0 30 .................................... ATTACTCTGCCTTGATTTTTTAAGCGAAAC 1106138 36 100.0 30 .................................... AATTTCTTCTCCCATTGAGTCCATAAGAGT 1106072 36 100.0 30 .................................... ACAAAGCGGACTTTTTACCGTTTTGAACGC 1106006 36 100.0 30 .................................... CCACTAACGCTCCAAAGCTTCTCATTGTTT 1105940 36 100.0 30 .................................... AAGAAACGACTGAGTTATTGAAATACGCAA 1105874 36 100.0 30 .................................... AACACGCGCCTTACTGTATCTCGGGTAAGG 1105808 36 100.0 31 .................................... AAGAAAGGACGTAATGAAAATGAGTAAGGCA 1105741 36 100.0 30 .................................... CTGGCACTGGTCAGTTTAACATTTTAGCTT 1105675 36 100.0 30 .................................... ACGTTGTATTTGATAAGAATGTCTCAGGTG 1105609 36 100.0 30 .................................... GTGGATTTGAATCCTAGTCGTTCGCTACGA 1105543 36 100.0 30 .................................... ATGCTGAAGATTATCAAGGTGTTAAAATCT 1105477 36 100.0 30 .................................... CTTACAGACCATATTCCTATTGTTTCTTCT 1105411 36 100.0 30 .................................... GCAATCCAACGCGATTATTTCAAATCAGAA 1105345 36 100.0 29 .................................... TCGTCCAGGAACTAAAGATTTGGACATGG 1105280 36 100.0 30 .................................... ACCCCACGTACATAAGCAACCAATTTCAAG 1105214 36 100.0 30 .................................... CTTTATTTTATGGCAAAAAAGAAAACATTA 1105148 36 100.0 30 .................................... TCCCACAAAGTAGTGGATTATGATGAAGAA 1105082 36 100.0 30 .................................... TACTTAGAAGAACTTCTACCAGAATAGAAA 1105016 36 100.0 30 .................................... TAACATCAACAGGTAGGAGTTCATCTGTTT 1104950 36 100.0 30 .................................... ATGGTAGAGCTGTAAGCACCGCTAGCGTTG 1104884 36 100.0 30 .................................... GAAGTAGTTGGGTTAAAGGTACTCTATCTA 1104818 36 100.0 29 .................................... ATGATAACTTACTAACTGATTATGGTATT 1104753 36 100.0 30 .................................... AACGGTTATAGTATCCGTTCACCTAACGAG 1104687 36 100.0 30 .................................... AACGGTTATAGTATCCGTTCACCTAACGAG 1104621 36 100.0 30 .................................... AACGGTTATAGTATCCGTTCACCTAACGAG 1104555 36 100.0 30 .................................... AAGAAGAAACAGCTAAAAATGTTAAGTTGG 1104489 36 100.0 30 .................................... AAGCTCCGATACTTATAGGCGGCGTTACCC 1104423 36 100.0 30 .................................... AAGACCTTATCGAAGAAATACAAGAATTGA 1104357 34 83.3 0 ......................CAAC...--..... | ========== ====== ====== ====== ==================================== =============================== ================== 41 36 99.6 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : ATGGATGATTACCTTGATTATGCCTCATTTATAAGAATTTGTCAGGTTATCACAAGAATGGCTGATGAGTTTCCAAATTTTTATTGTACGGTTTTTCCGTCAAACGAAAGCTACTTGTATGTGACTAAAGAAACAATAGAAAATATTACCATTGTTTCAGATTATATTGAATCTTTGTTTGATCTTGATTTTATGTATGAAAGGTTTGTTGGAAGATATCCATCCAACAATGTACCAACAAAAAAAGAATTTTTAATTCTTTTACAGAAGAATGCAAGTTATTTATTTAGTGAGCAAATTTCATATGTGAGTTTAGGAATTTCGGATATGGTAGCTATCAAGATACTAAATAGTTTATATCACTATGATAAGTCAGTTAAATATCCAATTTCAGAGATAAATCAGCTTGAAATAAGCTTTCTTAAGGATAAAGATTGACTTTTAGGCTCAATGAAATTATAATTCTTGTAGAGTATAAAGACCCAAAATGACGATTTGAG # Right flank : CCCACCTAGTTCGTCACTGGGTGGGGTAATCTATGTGGGTCATAGGTTTGCAGAATTGAGTTTTTATTACCTTTGATTAATAATAACGCTTTCTGCAAAAATTGTAAAATGATTTGCGGTAGCTGATTTTAGCGATATTTATCGTGCCTAGAAAACTTTTTATAGCACCAGTGGTGTTTATTTGTTATAATAGAAATAATGAATAATTGTATAGGATTATAGATAGATGGATATTCAAGAATTAAAAAAACGACAAGAAAAGATTCGCAATTTCTCAATTATTGCGCATATTGACCACGGAAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAAACTGTCTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGTATGGATTTGGAACGTGAACGTGGTATCACAATCAAATTGAATGCGATTGAGTTGAATTACACAGCTAAAGATGGTGAAACTTACATTTTCCACTTGATTGACACACCAGGGCACGTTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //