Array 1 323899-324174 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054927.1 Streptomyces microflavus strain NA06532 plasmid unnamed1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 323899 29 79.3 32 C.CAC......T.G............... GCCCTTGGCAACGGCGTCCCGATCGGCGTCCT 323960 29 89.7 32 .C...........G.......A....... TCACCCGGCTTCCCCCAGTTGCTCCACCTTCG 324021 29 100.0 32 ............................. AACCGCAACCCCGGTTCGGGTGGGTCGGGAGG 324082 29 86.2 35 .............G.........AG.T.. CTGCTCCAGGCTCACGGCGCCAAGCTCCAGTAGTG 324146 29 86.2 0 C.......T....G....A.......... | ========== ====== ====== ====== ============================= =================================== ================== 5 29 88.3 33 GTGCTCTCCGCGCAAGCGGAGGTGAGCCG # Left flank : AATCCGCCGCGTGCGGGCGCGTAACCCTGACACCCCCACACGCCTGACGCACACCCCCACCGAGCCCCTTCAAGATCGCGAAAATTGTCAACGAATCCGTTCACGCCGCCCTCCCCCACTACTGATCCGGTCACGGAACTGTCGTTCGACGGCCGCCTGGACTTCGGCGTTGGTGTAATGCCGGATGAGTACTCCAGGTGACGCAGTAGGCGGCGAGCGCCTCGCGGCAGCCGTCGGTGACCATTAACTCCCGTGTATTCGCTGGCATTTCCGACGCGGCCGGGGAGGGCAACGCCGACCGGAACGGCTTGCCTGTGGACGCCGTTCCCGCAGGAACCACGCGGATGGTGCACACGGTGCCGGTGGTGTCGCTGGCCGCAGTCTCGGCCTCCCACCAGCGCCCGTAGGTGCCAACTACGGGCCCCATGGGCGAGCTGAAAGCCGCGGCGGACCCACTCGTGCGGAGAGCACGTCAGCCGCAGGACATGACCGACGCCGGG # Right flank : GGCGAGGGGTGCAAGTCCTTTATGGCGCCGTAAGGCGACGTCAGCATCGTCAAGATGCCTCTGCACCGCTCCGGGCTTGCTCGGCATAGGAAGACCGGGGCGCGGCCGTTTCGGCATGAGGGTGGCCAGCCCGGCGTGTTCTGTGGCGAGGCGTTGCAGGGCCCGTGCCCGGGATGCGTCTCTGGGTCGCACCTGCTGCTCGTCGGCTGCTTTGGCGCGGAGCTCGGCGAGGGCCTGGCGGCCGTCGGCGAAGTGCTCCTCGGGTTCCCGGAACCGTTCGCGGAGCTGCCGTTCAGCAGCTGCCGGGAACTCGGGGCTGGTGTGCTGACGGGTGGCGTTCCAGGTAGCGCGGTGGGCGGCGATGGCCTCGCGATAGCCCTCCGGCGGATCCGCGCCCTGCATCGGTGCGGCGGGTGCGGTTGGCTGCGGGGCCGATTCGGCGGCCGCCGTGGTGGGGCTGGCCTTTACCGGTGCGGGTGCCAGGACGCGCAGGGCGGGTA # Questionable array : NO Score: 3.48 # Score Detail : 1:0, 2:3, 3:0, 4:0.41, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCAAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.90,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [7-7] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 412910-411994 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054927.1 Streptomyces microflavus strain NA06532 plasmid unnamed1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 412909 37 100.0 36 ..................................... GGCAAGGCCGGGCTGATGTGGTCGTCCGGCCGGCAC 412836 37 100.0 36 ..................................... CTCATCAGCGCGTTCGACAAGCCGCCGCTGTCCGCG 412763 37 100.0 37 ..................................... TCCTGCTCGTACGTCTCCGGCGCCCCCGCTCGCGCCA 412689 37 100.0 36 ..................................... CCCCTGCCCGGTGGGGGTGGGATTCTGCGCGGCATG 412616 37 100.0 38 ..................................... CTTGCCTACTCCTCGCGTATGGGCCCGGTGCTGGCGAA 412541 37 100.0 36 ..................................... TATAAAACCGGGGGCAGCAGCGCCCCGACCCTCACC 412468 37 100.0 36 ..................................... GACGTCACGGTCGGCAGCGAGGTCATGCGGGTCAAC 412395 37 100.0 36 ..................................... GTCCTCCTCGAGCCGCGCCGCGCCCGTGAGCGAGAG 412322 37 100.0 36 ..................................... GGCGGCAGCGTGGAGCTGTCGTGGCACGGAGCCGAG 412249 37 100.0 35 ..................................... GGCGTTCTCCTCGTCCTCGTAGAACGCGAAGGAGG 412177 37 100.0 36 ..................................... GCGCCTGCTCGGGGGAGAGGTACTGCGGCGTGCCCA 412104 37 100.0 37 ..................................... GACTCCAACGACGGCTGGTTGGTCACCCGCGCCCAGT 412030 37 86.5 0 ...............................TT.CGT | ========== ====== ====== ====== ===================================== ====================================== ================== 13 37 99.0 36 GTGGCGGTCGCCCTCCGGGGCGACCGAGGATCGCAAC # Left flank : CGGAGCGAACTGCCGGGCTATGCACCGTGGACGACCACCTGATGGACCTGTTGCTGGCCTATGACGTCGACACCACCAGTCCGGCAGGTAGACGCCGTCTCCGCCGCGTCGCCAAGACCTGCGAAGGACACGGCCTACGCGTACAAAAGTCTGTCTTCGAGATCGTCGCCGACGACAAGACCGTTGTCCGCCTGCTCCACGACCTTGGCCAGATCATCGACACGGATACCGACAGCATCCGCCTCTACCGGCTGCCACCCGACGGCTTCAACCATGTCCAAACCCTAGGCATCGCCCAAGTCCAACCTCACCGCGAAGACCTCGTACTCTGACACCAAGCCGATCTACACCTCAGATCGCTCCAGACTCTCCGCCTGCTTCGGAACCGGAAGCAGACACGCGAATCGTACCGAAGCGAAATAGGCGAATTCGCCAGAACTGTTACCTGCGGTCCGGTCCCCTCCCAACGAGCAACGGGCTCTTAACGCTGGTCAAGCAGG # Right flank : TCGGTCGGCACTCACGGTGAGCTGTCCGGCGTGGACCTCGCCTGGGTCGCTCTGCAGCAGGCCCAGCTCGCCGCGCGCAGGAGAGGCGGTGAGGCGAAGGCCTCGCGCCGCCGCCGGGCGACGGCCACCCGACGGGACGGCCAGGAACCGTCAGGGTTCGCCGCCGTGCTCGCCGGGCTGATGGTCGACCAGGCCCGGGAGTTCCCGGCCGCCGGCGGAACCATCCTGGACCGCTGGCCCGACATCGCGGCCACCGTCGCGCCGCAGCTGCCCGACCACGCGGCTGCAGTCGCCTTCCACCCGGAGACCGGACAACTGGACCCGCTCCCCGAATCACCGGCCTACCCCACCCAGCTCCGGCTGATCAGCGCCCGCATCACCACCGCGGCCAACGCGACCACCGGCACCGTACGCACCATCCGCGTCCTGCCACCCGGAACAGTGCCTTCGGACCAGCCCGCCCGGCCCGCGTCGCCCTACCCGGCACCGACCGCGCCGCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGCGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGCCCTCCGGGGCGACCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.80,-19.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 421879-423013 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054927.1 Streptomyces microflavus strain NA06532 plasmid unnamed1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 421879 37 100.0 37 ..................................... GTCCCCTCGCACGGCGCTGATCACAGTTGCGTGGCGG 421953 37 100.0 35 ..................................... GTCGCCCGGCGGGAGGCGACCGACGCGGACACCTC 422025 37 100.0 37 ..................................... GTCCACCGTGATGGGGGCCTCCGAGGAGAGCCGGGCG 422099 37 100.0 37 ..................................... ACGGCAGGGGGCTTCGGCTTGGTGGGCGGCTTCGGCT 422173 37 100.0 36 ..................................... CTTGAGGGAGCGGGCGGACCGGGCGACGTTGATCTG 422246 37 100.0 36 ..................................... TCCACGGCGCACAGCGCCCGGGCCTGGAGCTCCTGG 422319 37 100.0 35 ..................................... CGCTTCGGCCCCGGTCGGCAATCCGCCGGCCGTTC 422391 37 100.0 37 ..................................... TGCACAACCTTCGGGTTCTCACCCCCGGCGATGAGCA 422465 37 100.0 35 ..................................... TTCGTGCCGCTCTTCGGCCCGGACGCTGTGCCCTT 422537 37 100.0 37 ..................................... TGCACAACCTTCGGGTTCTCACCCCCGGCGATGAGCA 422611 37 100.0 38 ..................................... GTCTCGCGGGTCGCAGCCCAGCGCGATGACGGCCGGGA 422686 37 100.0 37 ..................................... GTCGCCCGCGATCGGACCTGGGCGACGGTCCTCTTCG 422760 37 100.0 34 ..................................... ACTGGCTCGCAGTTCGGCAGGTGCAGCACCCCGT 422831 37 100.0 36 ..................................... CTGGACCAGGACACCCTCGTCTACGGCAAGGTGCGG 422904 37 100.0 36 ..................................... GTGGCGACCAGGCGCACCCACACCGCGGCGTACCCC 422977 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 16 37 100.0 36 GTGGCGGTCGTCTTCAGGGACGACCGAGGATCGCAAC # Left flank : CGAGCCACGCAGATGATCCTCGAGCCGATGCCGGCACCCCGACCGCGGACTACGACTATGGGCGAACAACCCGCGCTCTGACACCTGACCTCCTGACCGCCGAACCACCAACCTGCCTGTAACCGACACCCTAAGATTGGCCACTGACACAGCCGTTGCGATCCCTGGTCGCCTTCAAGGGCGACCGTCACGCCCAGTTCCTTGATGAGGGGGCGGCGTCCTCGCGGTTGCGATCCTCGGCCGCCCCGAAGGGCGACCGCCACTCACAAATTTTATGGATCGACGCATCGGCCGAAGTTCACCGGTGAAGACCTCGTACGCTGACCAGCACGCGGGTTCACGTCCACGGTCACATGGCATTTCCCGTCTGCTTCGGAACCGGAAGCACACACGCGACACGCGGACCGCACCGAAGCCAGATGCCCGAAACCACCGCAATTATCACCTCCAGCGCGCTCCCTCTATGAAGAGCGCTAGGCTATTTGCACTGCTCAGACAGG # Right flank : CGCCGGAAAAGCCACAATCAAGCTGCGGAGGAACTAGTACTGCAACGGCGTTTGGCGTGACTGGTGGCCAGGTTGGTCGTTGGGCTGGTTATGGGTGGGGGGCTTGGTGATGTGAGGGTGTGGGCGGCGGGTCTGGGTGAGGTGCATGAGCGGTTCGTGCACCGGTTTGCCCGGTCGGAGCCGCGGGAGTCGGCGCTGGCGTATATGCGGGGGCTCATAGCGCCGTTGGAGCGGAAGAACGGCTGGACGCTCGCGGAGGAGGCTGGGCATGGCAGCCCTGACCGGATGCACCGGCTGCTGAACCGGTGTGACTGGGACGCCGATGAGGTCCTGGACGACGTGCGTGACTATGTGGTCGAGCAACTGGGTGACCCCGGTGCGGTGCTGATCGTGGACGACACGGGCTTCCTGAAGAAGGGGGTCCGCTCTGCCGGGGTCCAGCGCCAATACTCGGGAACGGCGGGACGGACAGAGAATTGCCAGGTGGGCGTCTTCCTCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGTCTTCAGGGACGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCGTCTTCAGGGACGACCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-11.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 427680-428257 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054927.1 Streptomyces microflavus strain NA06532 plasmid unnamed1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 427680 29 75.9 32 ACCA........GGT.............. CCGCAGGACCCGGACACGATGACGTACTGGCG 427741 29 100.0 32 ............................. GCCGAGCTATCGGAGCGGGACGCGGTCCTGGA 427802 29 100.0 32 ............................. GACTGCTCCCACTCCGCCGGAATTCGCAGGCG 427863 29 100.0 32 ............................. CTGGATCGGTGGGCTCTCAGCCATTCCGCTGC 427924 29 100.0 32 ............................. GGCGCCTTCCAGCTCCCGGGGGTGCGGGTCTT 427985 29 100.0 32 ............................. TCGCCGGACATGGCGCCCTCGGCGTGCGCCCG 428046 29 96.6 32 ...........A................. AAGTTCGCTGGCTGGAAAGACGGCACCCCGAT 428107 29 93.1 32 ..........T.................G GCGGGGGCAGCCGGCCGGATACCCGAGGGGGT 428168 29 93.1 32 ...........A......A.......... GACGGCCGGCCCGGCACCCCATCTCGCGGGTG 428229 29 96.6 0 ..................A.......... | ========== ====== ====== ====== ============================= ================================ ================== 10 29 95.5 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : CATCGCTGAACAGCTAGGCGTTACCGCCGGACGCTATCCGACGCAGCAGCGCTCCACCTGGAGCTACGAGGTCCTGAAGGCTCATCAGCGCTGGCGCCACCGGCGCTGATGCTGGAACCGGCCTGAGCAGGATCGCCCCTGGTCTCTATTCACGCACTCAGTCTCGCAGCAGCCTGCGATCGGACCTTCGGCCCGAGGGTGAGGGATAGTGGCAGGCTGTCATTCAGCTCTCTGTGCAGGAGGTCGACAGCCAGGATCCGGGGAGCTTCGGATCGAAGACGGGATGTGGCAGATCCGAGTGGTAGCGCTCAGCTGACGGCTCTGCCGTTGGCGGCAAGGACGCCGTTGGTGACGTCGAAGCGGTGTGGCCCCGTTCGGCTCACCTCCGCGGGCGCGGGGAGCAGTGGCGCTGTTCTTCGGAGGGGCACAGCTCACGGGGACCATCCCCGCGTGTGCGGGGAGCAGCGGCCGAGGCCGTGGGAGCTCGTGCGTCAGTGGGG # Right flank : CGACTTCGCCCGGCTGTGTGATGCCTTCGACCTCTGCTCCCCGTGCACGGCACGCTCCCGGGCGGCGCGCTCACGGTCCTGCTCGGCGCGCTCTGCGCGTACGGCGGCCTCTCGGAAAGCGGCTTCCTCATCAAGTTTGACCTCGAGCGTTGCAGCCTCGTGCGCCTTGGCCTCTTCCTGCGGCTTGTACTCCTCGGGCTTCCGCTCCGCGGGCTGCTCCTGCTCGCCCGTGTGCCCCTCATGGTCCGCGATCGCGGCGACGGCGGCGGCGCGGGCCGCGTTGAACACGGCCGCTGAGGCTCCCGCCGGGCCCCTGGGCGATCTTCGTCCGCCCCAACTCCGGGTAGGGGTCAGGGCGGGACGGGGGTCGCTCAGAACGGTGCCGGGACCGCCTCCCGGCCCTCTTCTGCCTGAGCCGCCGCTACGGCTGCGGCTGCGGCGACCTGCCACTCCCGCTCGATGCGGTCGCGGTCGGCCTGCGAGGACAGGCGGCACTGGCC # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4557701-4557306 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054926.1 Streptomyces microflavus strain NA06532 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4557700 29 96.6 32 ............................A CGTCGGCTTCGAGCGGCGCTGGTACTTCGAGG 4557639 29 100.0 32 ............................. CAGCCCCACAATCTGCTGCTCGTGTGCACCGT 4557578 29 100.0 32 ............................. AGGGCCCAGCCGGTCCATCCGGCCACGGCCAG 4557517 29 100.0 32 ............................. GCCGCGGTGTAGGCGTGCTCGGCCTTCAGACC 4557456 29 100.0 32 ............................. GAGAACCCCTACCGTCGAGCACGGTTCACGGG 4557395 29 93.1 32 .....................T....T.. GACTACGCCTCCTGGATGCGGGTCCCCCGACA 4557334 29 79.3 0 ..........TA.C.......C.CG.... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 95.6 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : GAGACGACGGACGTGGGCACGGCAATAGCCGGCGAATTGCAGCTGATGGATCCCGATGTGCGTGCGTCACGGTCACTCGCCGAGCGGCTCCTCGAACCGGAGTTCATCGAGGTCGGGCCTCGGGGCGGCGGTGGACGTATGAGGAGATGCTCGCCCCACTCCCTGAACTGAGCGGCGGGGACTCGGACGGCCCGTGCCACGAGAAATCCAGCATGACCGGTGTCGTACTGGCCCCAGGGGTGGTGCACCTCACCGACGAGAGTGTCCTCGGCGGCAACCGGGCCCGCCGGAGTTCGTTGTGGCGCAGGAAGCATGGTGAGACGGCTTGGCAGATGTACTACCACCAGGCGACGCCTGTCCCGGCGGGTGAGGGGCAGAATCGCTCCTAACGTGCACGGCTTACAGCGAGGACCGTTCGCGGCACGGGGGGAGATAGGTCCGTTTCTCAAGAACTAAGTAAAAACAGCCCATCGACCGCATAAACCCGCAGGTCACGAACT # Right flank : GCTGCCCGGCGGCCCCGGCGGCCCCGGTGCAGCTGGTCCCCGCGCACCCCGGTGCCGCCCCCTCACACCCCCGTAGGCGGCGGCACCGCCGCAGCCCGCAGGCCCAGGCGGTCGTGCTGGTCCGTGATCTCCGTCGGGTGGGCGGCCAGCAGGCGGCCCGCTACCGGGAGCGGCATGCGGATCACCACCGGGCGCGGGAGCGTCAGGTCGCGTTCCGCCACCTCCGTACGGGATGCGCGTACCCGGTTCGTCACCCGGGCCACCACCCGTACGTCCAGCGTGAACTGGACCAGCACCGACGTGAACTTCGGCTTGTGCAGGGGCATCGAGCCCGCTCCGTTCGCCGCCGCGCCGCTCGCCGAGCCCGCGCCGTCCACGTTGCCCATCAGCTGGTTGAGGCGGAACTGGTCGGCGTTCAGCACTCCGGCGCCGAACAGGCCGCGTGCCTGTCTGCTCTGCTCGGCCTGGCTCTGGCCCTCCGTCTGGGTGGGGCGGGGCGC # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [11.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //