Array 1 155-2385 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWMW01000050.1 Bacteroides salyersiae strain BIOML-A24 scaffold50_size33068, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 155 35 100.0 34 ................................... AGAGCCCAAATCACACCGATACCGGCACAAATGA 224 35 100.0 34 ................................... TTATTATGCTTTTGTCCGTCTTTACCGTACAGAG 293 35 100.0 35 ................................... TAATAGTTTATGTTTGGCAGGGTGACCCCAATCAT 363 35 100.0 37 ................................... GCATATCCGGGGTCGGAGGAACCAGTTTGTCTACATT 435 35 100.0 36 ................................... ATTGGGGTGTAGAAAATATCATCCTCTGTGGTGATT 506 35 100.0 40 ................................... TCCAACGTATCCTCCGATTACCTCAACAGCGAAGTTGCGA 581 35 100.0 40 ................................... CTTCCCGTTGCTTTTTGGTCAGCCGGTTGAGAATTTTTTT 656 35 100.0 37 ................................... AAACTATTCCTTTGGGAAGGTTTGGCTTATGCGTAAT 728 35 100.0 39 ................................... GGTATTTTCTTGCGCATTGATATTTGTTGTTGCAGCAAT 802 35 100.0 36 ................................... GAGATTTCCAATATCTTACGGGTCGCTTCCTTACCG 873 35 100.0 34 ................................... AAACAGTATCATTCATAACTTTGGCGTTTATATA 942 35 100.0 32 ................................... ATTGAAATACGTCAATATAACGGCCGTTGTTT 1009 35 100.0 36 ................................... AAATCCAGACTTTGTGTGCCATTGTCTTCTTGGTTT 1080 35 100.0 36 ................................... AGGAGGAAATATGCATCTCCCTTTGCCTTACTGGTG 1151 35 100.0 33 ................................... GAACTCAGATTTGTAAACGCCCATACGAGCTTT 1219 35 100.0 35 ................................... ATTATCTCATCAGAAAGTCCCTGTAACTCCCATTC 1289 35 100.0 38 ................................... TAAAAGCATTTCCAAACCGTTTTCCGTCTCAATGATTT 1362 35 100.0 39 ................................... TTTAAGGAGACTGAAAGTTTCAAGCTTCAGCCGCAAAGA 1436 35 100.0 34 ................................... TTCTGGGCTTTCAGAATATTGGTGTAACAAGTTG 1505 35 100.0 38 ................................... TTTTGGAACGCTTATAGGGTTCCATTTTTACGTGTTTC 1578 35 100.0 41 ................................... CTTTTTACATTTGCGACTGTTAATTTTGCTTTCATAATCTT 1654 35 100.0 34 ................................... AGAACCGGAGCAAGAAGTCAGAACACTTAAGGCT 1723 35 100.0 37 ................................... TTCCTTCGGAGCAAGGGAACAATTCTTTAACCAATAT 1795 35 100.0 39 ................................... GGCAAATATAGCAAGTTTGGCATTGTCTTTCATGATACC 1869 35 100.0 37 ................................... ATGCTATACCCTGATTCCGATATCCGTTTAAACAACA 1941 35 100.0 35 ................................... GTCGCAGGAAGTACACATTGCACCAAAAACTACTG 2011 35 100.0 37 ................................... GGCGGCGCAGCTGCTATTCCAACCATCTTGTGTACAT 2083 35 100.0 37 ................................... ATCTTTGGGAGTAGGGAGGATTAAGAACATTTTGTCT 2155 35 100.0 37 ................................... ACATTTTTGGATCATTCGGTTCAAGATGCACCGGTTT 2227 35 94.3 35 ...................A............A.. AACTCGATACCAAGAGATGAACTCAAAGCGTCAAA 2297 35 71.4 20 .A....A.....C...T..A..C..AA.C...A.. TGTGTATGTATACTTGTGTG Deletion [2352] 2352 34 80.0 0 ......-C..TC....TC.A............... | ========== ====== ====== ====== =================================== ========================================= ================== 32 35 98.3 36 ATTTGAGTTACTTCCAGTAGAATAAGGATTAAGAC # Left flank : GCATATATTAGCCAAACAAATTATTGATTTTCTTAAAAATAATACATACATTTGCGAAAAAGTTATTGGAATATAGCGTATTGTATTAAATAACAATACTTTATGAGAAATATACAAAACAAAGAGTAAAAAATAAATTATTGATAATCAGATTA # Right flank : CAAGCAACTCTCTAAAATCATTTATATCTCATTATCCCGAATTCAGAAACAATGATACATCATACACCTTTAATTCACTCTAATAATATTACCCCATTTTAACCTCAAAATTTTTCTTTTCCAATACCACATATCCCGCATTTTCATTATATTTACCTCCAAATACGCAACACCAAATGGCAAGAGCAAAAAAGACATTCTGTGTCGTAGCATACGATATTAAAGAAGACCGGAAAAGAGCACGCGTCTCTAAAATTCTGGAAAAATATGGAATAAGAGTCAATTTCAGTGTATTCGAATGTATGTTTACCGATATCCAACTATTACAAGTGCAAGAGAAAATAAAAAAAATATTGGATAAACGCTCCGATACAGTCATATACTATCCGATTTGCGTCAATTGTTATACAAAAATCATATATCAACCGGCACATCGCCAAACGTCCCGCACTATAGAAATTGTATAAAATAAAAAGAAATCATCTGATGAAACCCAAACG # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGAGTTACTTCCAGTAGAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //