Array 1 7295-3674 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZOF01000021.1 Streptomyces glauciniger strain CGMCC 4.1858, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================================================== ================== 7294 29 96.6 32 ............................T TACGTGCCCGGAAGCACCGGGTGGACGATCAA 7233 29 100.0 32 ............................. TGACCAAGGATATTGCGATCGGCGCCACCGCG 7172 29 100.0 32 ............................. TCGACATATGACTTCGGCACAACCCCCAGTAA 7111 29 96.6 33 ............................T TCCCGCTGGCATCCCGAAGTCACCGACGCCCAG 7049 29 100.0 32 ............................. ACCCCCTGCACTGACAGCCGGGCCCGCCCGGA 6988 29 100.0 33 ............................. ACCCGCTTGACTGACACCGGGACCGCCCCGGAA 6926 29 100.0 32 ............................. TACGTGAAGCAGATCCTTCGGCGCACCCCCGA 6865 29 100.0 32 ............................. TTCCTCAAGGGCGGGGCCCCGCGGGTCAAGCA 6804 29 100.0 32 ............................. GGTGGCGATCCCCTCGTCCACAGGGTCGGCGA 6743 29 100.0 32 ............................. ACTGCGCCGCCGGTGCCGGGCATGTGCCGTAG 6682 29 100.0 32 ............................. CGACCGCGCCGCGGCCAGCCTCCGTCACCTCG 6621 29 100.0 32 ............................. AGCGCCTACACCCGGCAGGGCGACACCTTCGA 6560 29 100.0 32 ............................. AGACATAGGGGTGACCCTTCCTGAGTGTGTGT 6499 29 100.0 32 ............................. AAGAGCCTGCAGGGGCGCTGACATGGCCGCCA 6438 29 100.0 32 ............................. GGGTCGGGCCTCCTCTCCATCTCACCCGATTG 6377 29 100.0 32 ............................. GCCGGCACCGTGCTGGTGATGGTCCGGGTGAT 6316 29 100.0 32 ............................. CCCCTCACCAAGCGCGCGACGGGGTTCCTGAC 6255 29 100.0 32 ............................. AGCCGGTCGGCCTGCCCGTTCGCCGTGCCCGA 6194 29 96.6 32 ............................A AGGACGCCGGAGAGTGGGTTGCGGATCCGGAG 6133 29 100.0 32 ............................. TTCACGCCGGACGACGGCCCGGAGGCCGACTC 6072 29 100.0 33 ............................. CGTCAACCGAGGTGAGAGCGCCAGTTGGGCCTT 6010 29 100.0 32 ............................. GTCTGGAAAGCCGACCCCGACACCGGGCAGTG 5949 29 100.0 32 ............................. TCTTCCTCCTGCTCGCGGGCCCCCGCGCGGTC 5888 29 96.6 32 ............................T TCAGCACATCGGCGGTTGGCAGGTGGCCGATG 5827 29 100.0 32 ............................. GCGCCTACGACCTTCTCGGTCTGCCGACCGGG 5766 29 100.0 32 ............................. CATGATGGAACGCCTCCGCATCCTCCAGATCC 5705 29 96.6 32 ............................T ATGGCGAAGTCCCTGAAGACCCGGCTTGCGAA 5644 29 100.0 32 ............................. GCGGACTTCACCTTGCGGCCCTTCTCGCTGGT 5583 29 100.0 32 ............................. CCGGGGCGGGCTGGCAGCCCTGAGCGCCCGTC 5522 29 100.0 32 ............................. GCCAAGACTGGCCGCAGGGCGTCGCCTACCAG 5461 29 100.0 32 ............................. GCGGGCGGGACGGGATTACCGGCCTCGGCCTG 5400 29 100.0 32 ............................. TTGGGGAAGACTTCGGCGATGCGCTCGAGAGT 5339 29 100.0 32 ............................. TGCCGCTCCACCGGCGCCCAAAACTGAAGACG 5278 29 100.0 32 ............................. GTATCGGGGAAGCCATGGCGCCTACCACCGCT 5217 29 100.0 32 ............................. ATCTGGTAGTCCGACGTCGCAGCCACCTCTTC 5156 29 100.0 32 ............................. TACCGGGCCCTGATGGCCGACCTGCGCAAGGT 5095 29 100.0 32 ............................. GCGTGGGACCGCGACCGGCACATCGTGGCCGC 5034 29 100.0 32 ............................. TCATTGAAGTCCTGCAGCGCGCTCCACGCCTT 4973 29 100.0 42 ............................. CCCGAGCCGGGGGGTAGCGGCTCGGGGGTTCCGGGGGAGGTG 4902 29 100.0 33 ............................. GTTCCGAGATAAGTGATCGCGGACGCGAGGACA 4840 29 100.0 32 ............................. GCGCTCCGGCTGCACAAGCAGCACTGCGAAAC 4779 29 100.0 32 ............................. ATCAGTGATCACACGTACCACAAGGTCCGGGC 4718 29 100.0 32 ............................. CGAGATGCTCGAACACCTCGCGCGGGAGAAGG 4657 29 100.0 32 ............................. CTCCGCACCGCGACCGCGCCGCTGCCCGTCAC 4596 29 100.0 32 ............................. GGTCGCAGCTCCGAACCAGCCAATACGGGCAA 4535 29 100.0 32 ............................. GTGTGGAGCTCGAAGAGCGAACTGTGGGCGGT 4474 29 100.0 32 ............................. GCCATCGGCCCTGCCTACCGCTTCATGTGGGA 4413 29 96.6 32 ........T.................... GCCGCGAACATCGTCCGCGCCATCGTCCAGTC 4352 29 93.1 32 .......................CT.... CATCCCTCAACGGGCCATTACCGGCCCGGATT 4291 29 100.0 32 ............................. ACCACCCAGGTCGCCGCGATGCTCGGCTTCAA 4230 29 93.1 32 ...........G.....T........... GACGGCGGCGAGGATGCCGATGACGCTCGGGC 4169 29 96.6 31 ............................G CGTAGTAAACCGCGGTGCCGTTCTCCTCAAG T [4143] 4108 29 100.0 32 ............................. CAGGCCCCAGCCCTGCAGGACCAGCTGCAGGA 4047 29 96.6 32 .................T........... TCGTAGGTGCACCAGACACCGTTCTGGCCGTG 3986 29 96.6 32 .................A........... GACGCGGCTACCTCTGCGAGCTTGCCCTCGAC 3925 28 82.8 68 ....................-.C.C.T.T GAAGGAACGTGAACTGCCGCGGGATGGGATGGGCCGCCTCCGGCCTCCAGACCGACACGGTCCTCCGG 3829 29 93.1 32 ........T..G................. AGGCCGGCTACGAGGATGCCGAGCGTGATGAC 3768 29 82.8 38 .....T..T..G........TT....... GAAGTCCTCGACGCGAGCGGCGCCAGATCCGCATCCCT 3701 28 82.8 0 ...........G.T......T-....T.. | ========== ====== ====== ====== ============================= ==================================================================== ================== 59 29 98.3 33 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGATCAACGTGTTGCCGCGGGCGTCAACTATGCACTCGAGGCAAGCTGGTGACGATCATCGTGCTCACCAACTGCCCGGTCGGCCTGCGCGGCTTTCTCACCAGATGGCTACTGGAGATCTCGCCCGGAGTCTTCATTGGCAACCCATCCGCCCGGATCCGCGAGGCACTCTGGGACGAGGTACGCCAGTACACGGGCCAGGGCCGAGCCCTTCTCGCTTACACCACCAACACCGAGCAGGGTTTCACCTTCGACACCCACGATCACGCTTGGCACCCGATAGATCATGAAGGCCTCACCCTCATCCGACGCCCCAAGGCGCCAGGCCCCTCCAACACCAAGGCACCGCAGCCAGGGTGGAGCAAGGCCGCCAAGCGGCACCGCTTCGGTCGCCGCTGAGTGCAAACCACCCCGCATGGAGGCTTTTGAGTGTTATGTCGGTATCTGAAGAAGTGCTAAAAACCACTGCCTGCCGCCGATAAAGGCGCAGGTCCCACAGT # Right flank : GTGGGCCCCACGCGCTGAGGGCGGCGAGTGCCCGCTTCTTGTGTCTGCGGGGTGGTCCCGTCGTGCGTGTTTGCCGGGGTCGAGACGAAGCGTCGAATGCTCCGCAGCTACGCAGACAGTTGCTCTATGTGACGCCGCAGCCGCGTGCATCAAGGCGGTCGGTGCCCTGCATGCGGGCATCAAAAACCTGGATGCGAGAGATCGGGCGCGGCGCTACTGGCGGTGGTGCTGGAGCCGTTGGTGTGTTTGCTCGTGATGCCGCGCGCTGGCCCACCTGGACTGCCGTGAGGGGTGGCGGGTCCCGTTGCCGGAGCTGGGTGCCACACTCGAAGAGGGTCCCGGAACGCTTCCCCGCGTGAAGGGGCCCGGTGCCATCTGACGGCACAGCCAGGCCCCCGCCGACCTACGACCGGCGGGGGCCTCGTCACGGCTGGAGGCGAACTGCAGCCTTCGAGAACACGTGCTCGGAGCTCGAGGTCGACTGCTCCCTGGGCCGCAGA # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [26-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 17268-16811 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZOF01000021.1 Streptomyces glauciniger strain CGMCC 4.1858, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 17267 29 100.0 32 ............................. AACAACGGCACGTTCCAGTACCGCGTCGTCAA 17206 29 96.6 32 .......T..................... AAGGCGGAACTGTCGGCCGAGTTCGAGGAGAA 17145 29 100.0 32 ............................. GGCTCACCTTGCCGGAACCCGTCCGGGATCAC 17084 29 96.6 32 .................C........... ACCCCCGCGGGCATTGTCGACCTGTCCACCGG 17023 29 100.0 32 ............................. ACGCGGTCATGGGCGGCGCCTGCCGTGGCGGC 16962 29 96.6 32 ...........G................. CACGGCGGCAGTCCGGGCCGATGCCGACCGTT 16901 28 93.1 34 ...........G.............-... TACGAACGCCGCCCAGTACAAGCCGGTGGTCAGG 16839 29 72.4 0 .....T.....G...........CCCGTG | ========== ====== ====== ====== ============================= ================================== ================== 8 29 94.4 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGAGTCGAACAGCC # Right flank : GTGCCAAGCCGCGTAACGGCGTTGGTGGTCTGGTCTCCAGGTTGACGGTGGAAGGTCCTCAGTGCGGGCTCCGCGCACCCACACATCCCACGAGCCGCCCCCCCGCGAGGTTCCGTTGGCGGCGTAGAGGCGGATGACGCGAGTTTCCTGTGCGGGGGTCTTGTTGTTTCTATGGTGTGTTCTGATGATGTCGTTTCTGTGATCATTACGTGAAGGGGCGTAGGGGGCGTGGGTGAAGTTGACGGGGCTGAGCGGGCGTTTGGTCGGGCCTGTGCGGGCGGTGTGGGCGAAGCATGATCGGGCGTCTGATGGTTGGTTGCCGTTGTGGCAGCACATGGAGGACAGCGCTGCGGTAGCGGGCTTGTTGTGGGATCGGTGGTTGCCGGCGGCGGTGCGGCGTGTGGTGGCGGAGCCTTTCGCGGGGGATGAGGGGGATGCGCGGCGGCTGCTGGTGTGGCTGGCTGGGATTCACGATGTGGGGAAGGCGACGCCGGCGTTCG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 18815-17925 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZOF01000021.1 Streptomyces glauciniger strain CGMCC 4.1858, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 18814 29 100.0 32 ............................. GAAGTACCCGCTCTCGAAGCCGTAGTGGCTCC 18753 29 100.0 32 ............................. GGCCCGAACGGCTACGACTGCAGCGGCCTCAC 18692 29 100.0 32 ............................. GTCAACAGCGGCGCGGCGGCCGGAACGTGGCT 18631 29 100.0 39 ............................. TTTCTCGAACCGCTCGGGGTGGTGGATGCGCATCGGGCG 18563 29 100.0 32 ............................. GCGGCAAGGATCTCCTCCTTGGCGTTCTGCGC 18502 29 100.0 32 ............................. TTCTCCGGGTTCTACGACGGAACGAACCAGCC 18441 29 100.0 32 ............................. GGGCTCACCGGAATCACGCGGTCGATGACAGC 18380 29 100.0 32 ............................. GGAGATGCCGGGGTTGATCAGTGCCATGTCTG 18319 29 100.0 32 ............................. CAACCGGCGAACGCGGGCGCCGCCGGCGCCTA 18258 29 96.6 32 ............................T GACGGCGTACCCGGGGGCAACAGCTCCTTTGG 18197 29 100.0 32 ............................. CGGCCCACGCCCACCAAGCTTCCGGCCCCTGA 18136 29 100.0 32 ............................. TAGGGCACCATGTACGGCACCGCCCCTCCCGC 18075 29 100.0 32 ............................. GCCAGCACCGACCGCGGGTCCTCACCGTCCGC 18014 29 100.0 32 ............................. GCCAGCACCGACCGCGGGTCCTCACCGTCCGC 17953 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 15 29 99.8 33 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : ACGGCCTGGTCCCAGCACCCCGCGACACCGGGTCCGCCACCGCGAAGTCCGCTGCTTCAACGCCGACGGCTCCACGGCCACCATGCTCGGCAACGCAGCGCTGTACCGTATGGTGCGCGTGCAAGATCACGGCATTCGTAAGATGAGCCTGCTCAAGGCCGAGGTGAAGCAGGAGGCCCGCGTCGCCAACGAAGGTGTGTGAGCCCCAGCCAAGGCCGGTGACGTCACGCTGCGGCGGGTCGCCGCTGTGTTCCACTGGCAGCCCGTCTGGTGGGCGAGGCACACCGGCACTGAGCACGTCGTCGGCATCGGCGAGGACGTCGACGAGGTGTGCGGTCGACTGCGCCATCTGGACCCCCGCGCAAAGGAAGGGCGGCTACCGAGAGAGTCCGCGCCCACTCGCCATCTGGCGGCGGCTCCGCTTCTGGTCCCAATTGTCGCTTTCCCTGCAAGTGCTAATTTTCTTGAGTCCAGTCCTGCAAACATGCAGGTCGTGGAGT # Right flank : TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //