Array 1 2462-2623 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYTX01000013.1 Mesotoga sp. Brook.08.YT.4.2.5.1 Brooks.4.2.5.1_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 2462 29 100.0 38 ............................. TGGGATGATTTTCTTGTCGGTGGAATAGTATTTGCCTC 2529 29 96.6 37 ....A........................ CCGAATCAAAAGACTTGCCTCTAAGCAGTGCTCTGGC 2595 29 96.6 0 .............A............... | ========== ====== ====== ====== ============================= ====================================== ================== 3 29 97.7 38 GTTTGAAGAGAAGCAGATTTGCTTTAGTG # Left flank : TTACTACACCTCCATTTGCTAAGTTACTATAATCATACAGGAGAGAGTAAGAAAAAGGAGCATCTATCTTATCTAAAGGCGGGCGAAAATGCAGAATCTGCTAATCGATAGACCATCTGAAGAAGAGAAATTCGAGATCATGAAGGAAATGTATTACTCAATTGCCGAGTCTAGTAGCGGGAGGCATTCACTTCCGGATCTAAGACCGATGGATGAAGTATACTCCGACTTTCTCAAGAGAGGAGACTCTTTGATAGTTCTCAGGAGCGGCGAAGAAATCGAGGACATGTACATTCTGGTCCCCAGATCGATGAAAGACTCGCGTTCGGAAGATCCGGTCACATCTATGACCTGTTTGTGAGCGACATATATAGGAGAAGAGGAGCAGGGAAGCTTCTGCTTAGTGCTTCTTTAGAAGAACTCAAGAGATCCTCTTACTTGACGGTCACAGCAAATACATACAGGCTTGGAGCAGGATGGCGCCTTCTCAAGAGCGACGG # Right flank : GTCGGCAGAACACACCATGTTGCCGATAGAAGGCTAGAGGTAATGCGCGGTATACGTGAAGATTTGAGAAGTGTTTTTTTCGAGATTTCTTCTTCTCCTGAAGTGTTGAGAAGCCAGATGTCCATGACTCCAAGCGAGCTGTTCTTCACGTTGAATGAGACTCTGGATTCAGGGGGCAGAATTCTCATCTGCAGGCGAGATGAGAAAGCTGTCGGGATACTTATCTACTCTGTCTTCGAGGATTTGATGACATATAATCTACTTGGATATATAGAACTCGTATTTGTCATGCCACATTTTCGAGGAAAGGGTGTTGCGAAGAAACTGCTTTCATTTGCCACGAATGATCTGTCGGGAGAAGGTGTTGATGAAACGTTTTTTGAATGTGTCTTTGACAGCGATTATCACAATTGGTCTAAGGCTGTCGGGATGAGTGAATTCTCAATTCTTCTGGAGAAGAGTCTACAGCAATGAGAAGAGATCCCGAACTTTGATCGTTT # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAGAGAAGCAGATTTGCTTTAGTG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.60,-3.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 19035-18404 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYTX01000010.1 Mesotoga sp. Brook.08.YT.4.2.5.1 Brooks.4.2.5.1_24_corrected, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 19034 30 100.0 38 .............................. CCTCCCGGTTGTCATACTTACCTTCCATAATTTTTAGG 18966 30 100.0 36 .............................. TAGCCGGAACTCATTCAGAAGAGGATCTTGTGATAA 18900 30 100.0 36 .............................. GCCTTACCGTCCGCTTCGCTATGTTCTCGTACTCCT 18834 30 96.7 36 ...............C.............. GTAGTGTGATTGTCCATTATAGCAATAAGCTGAAAG 18768 30 100.0 36 .............................. ATATACTCGCCGTCTATTGAGACGACGTGATATATG 18702 30 100.0 38 .............................. CTAGCAACATTGCCTTCAATGTCTTCTGCGTAACGTAG 18634 30 100.0 36 .............................. CGATTAACATCGAGAAGGTGTGATGAGATGGGTAAC 18568 30 100.0 38 .............................. ATATGTAGCTGATTTCCTTACTTCTTTTTCTGGTTTGA 18500 30 100.0 38 .............................. AGATGGTGCTGGAGATTCTGACTGCAGGAGGATTACTG 18432 29 93.3 0 .........................-..T. | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 99.0 37 GTTGCGTGAGAACCATAGTGGTATGGAAAC # Left flank : CTTATTGCCGGATCACATTATATAACGTCGATTTTGTTGAACTCCATATTGCGGAGCATCCTTATCCGCTTTTATGAATCGAGTTGTGTTATTCTTTCAACAAGCTTTTCCCGAGTTAATGATTTTGTAAGTGATTCTCGTCGGATCGATCGTCTACCATTATCCTCTGAAATGATTTTCAAATAACACTTCTAGACCTATTTAGAATCATTCTTGTACAGTTTACATAGATTCGACTGGCAATTGGTCATGTGATTGAAAGCGAAATTGACAGCTGTTTTCTTCTGTGAGCTTTTGCCGAAGGGTATCTCGCCGGTATTTTCCATGATAGATCTTTCTTAGAAGATACCGGCATGTTCTTTCTTCGAAAAACTACGAGGCTTTCTCGAATAAACTCTGAACAAATCTCCAAAACGCAATGTTTACGGCTATTGCAAGAGCTGACCATTTAGTTGATTCCACCTCCTAAAAACCTGTATAATATCTTTGTAATAGAAGCG # Right flank : GCTGCCTTTGGCAGGACGCTGTGCCGGGAAGATCATCCCGGGAAGTGATGCGCCGAGAACCATCGGCGGACGCAATGCCCGGAGAAACATCCGGGGACGCATGGCTGGCTTCGCCAGGAGGGAGAAGCTTTCTAGGGGCAGGACGTTAGGTTGTATGAACCAACTCAACTGGTCATCCTGACGTGCTCTTGGTCAGGATCTGGTCTTTGATCTTATCGGAGGACGGGTCCATGCTCTTGGACGGTCAACGGAGGACGGCTCTTATATGAACCATAGTGGTATGGAAACTACTTTCTTACTAAACAGAAATCCAACTCAAGCATTTTAATAACCAACTTCAATTTAACTTAAGAGTATTATGTTAAATTCATCTGTTCTCTTCTAGCCCACTCCCAGTAAAGGCTTCATTCGAAACTCTACCTCTTCTGTTTGCTCTCTTTGATTTTGTATTTTACACAGTATGTGATATTATCTATTTATGTTAAATTAATGAATTTAGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGTGAGAACCATAGTGGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 10443-1331 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYTX01000053.1 Mesotoga sp. Brook.08.YT.4.2.5.1 Brooks.4.2.5.1__27_corrected, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 10442 30 100.0 36 .............................. AAGAGTTCATCGACAAACTTGTCAATGGTTATGTTG 10376 30 100.0 36 .............................. AATGATTCCAGTACACATATACTATATCAAAACCTC 10310 30 100.0 38 .............................. ATAGTATGGTTGTTGCTAGTGGAGTTGGCACGACTCAG 10242 30 100.0 35 .............................. TCGGTTCTAACATTCAGATTGGAAAGGGAGTCGGG 10177 30 100.0 37 .............................. CTAGTGGGGTCGGCACGACTCAGGCAGTCGTGGGGTA 10110 30 100.0 37 .............................. TTCTCTTTGATTTCGGCTATTTTTCGTTCTATGAGGC 10043 30 100.0 37 .............................. TCAAAGTCTTTTTGAACATCATCCATTTTAGTGAGCA 9976 30 100.0 37 .............................. AAAGGCGCGAAGCGGAGAGGGCGAAACAGGCAAGCCA 9909 30 100.0 35 .............................. GTTGTGCCTACAATTGCCATCTTTGCATTCTCAAA 9844 30 100.0 36 .............................. ATATTCCCACGTGGTACGGAACGAAAACGGTGGCAA 9778 30 100.0 37 .............................. AAAAGCACGGAGTACGTTGATGAATCGGTTGATTATC 9711 30 100.0 34 .............................. GTGGTACGGGTGGCTTTGGGGACGAGATGGTGCC 9647 30 100.0 38 .............................. CTTCGTCGTCCGTGAGAACCTCGATATTCACGCTACCC 9579 30 100.0 36 .............................. TCCGTAGTCCAGCGCTTCCTCTTCGCTCTTCGCAAT 9513 30 100.0 36 .............................. TTCTTCCACATTCAATTTCTGAGCGGGTTTCTCCTG 9447 30 100.0 36 .............................. ATCTCTCATCATCTGCGTGACTTTCCAGCCGACACC 9381 30 100.0 34 .............................. CATAAGCGCAAAGGCTGCCGATTCAGATAAACTG 9317 30 100.0 37 .............................. ACATATTGGATATCAAAGATACCACCACCGGTCTTCA 9250 30 100.0 39 .............................. CAGTCGCATCGTCAACATCGATGCGATATGCACCACCTC 9181 30 100.0 37 .............................. TGGCAGCAGCTCTCGTGGGCTTGCTCAAGGAGTTCTG 9114 30 100.0 34 .............................. GGTATATCCGAGTTTTACGAACCAGGGATTAGTT 9050 30 100.0 37 .............................. TTATGTTCTTGGTACCAAAGTTTCCGGGGAACAATAC 8983 30 100.0 36 .............................. TTTCTCGCCTCCTTTTCGCCAATTTCCTCTTCCTTC 8917 30 100.0 34 .............................. CTATCCTCGCCAACCGCTTCAGCGGCGACAATAG 8853 30 100.0 36 .............................. AGCAGATTATGGCGGGTATCGAAAAAGCTATTGAAC 8787 30 100.0 36 .............................. TATCATCCGAGAAAGAAAGTTCCTTCTCAGACGATT 8721 30 100.0 38 .............................. AAGACATTCCCTCTTAAGTACAGCCCAATGTATTTCTC 8653 30 100.0 35 .............................. TCAGTTTTGGAACGGCGGCCACGAGCATCGGATCG 8588 30 100.0 34 .............................. ACGGGCATTCTTATGTTATCGATGGAATCTCGTT 8524 30 100.0 35 .............................. GAGGTATGACATGAAGAACACAAGAGGATATGATG 8459 30 100.0 36 .............................. CCGGCTCCTCTTGGGACTGGGGGGAAGCAAGAACTC 8393 30 100.0 37 .............................. TAGAGACGATCGCCGAGGTAGAGATTGAGAGAGTCAG 8326 30 100.0 35 .............................. ATAAGCGAGAGCAAAGCCGAGCGAACTGCTACTGT 8261 30 100.0 36 .............................. TCGTCTGACCCAGAGTAAGAGATCTTCCCGGTCAGA 8195 30 100.0 35 .............................. ACCTCGGCAACCATTGCAAACTTCTCTGATTTAGG 8130 30 100.0 35 .............................. TCGCACCTTTTGCTGCCACGTCTTTGAAGAACGTA 8065 30 100.0 34 .............................. CCGGATACCAATAGACATCTGATGTTTTTTTCAG 8001 30 100.0 35 .............................. AATATTTTAAGCGCAAATGGGATTATAACAGGACA 7936 30 100.0 38 .............................. TGAGCCATAAGCAAAATGAAGGCCCATTCGGCATTAGT 7868 30 100.0 38 .............................. TCACATCGCCAACGATCTTTGCCCTAATCTCATCGTTT 7800 30 100.0 36 .............................. AAAGATATCTGACAGCGGAGGAATACGAGAATAATG 7734 30 100.0 36 .............................. ATGACTACAACTACAATCCCGCTAGCGGAGGATTGC 7668 30 100.0 37 .............................. TCAGAGCGTCACCACTGGCTGTAATCTTCACTGAGTC 7601 30 100.0 36 .............................. CAGAAATTTCACACGAGTCGGCGCCGGGAGAGCTGG 7535 30 100.0 36 .............................. GCAGGTATCGAAAAGGCTATTGAACTTGAAAACAGT 7469 30 100.0 33 .............................. AAATTGTAACATACCATTATAGCTATATATTAT 7406 30 100.0 36 .............................. GCAGTGGCACGAAAACTTAAGAGCTTTGATCAAATT 7340 30 100.0 36 .............................. TGGGCGCCTTTTCAAAGCTTTGACTACTTTTCTAAC 7274 30 100.0 35 .............................. TCTATCATGGTTCAAAATTCATGGAAAAGGGGGTG 7209 30 100.0 36 .............................. TGAACCTGGCAATAAGTAAGTGAACAAAATTCACGG 7143 30 100.0 37 .............................. TGAGAAGTAATCACGCCTCCTGGTCTGCTGTGTGGGT 7076 30 100.0 36 .............................. CTTACTTGACTACTTACCTTGATTCACGTGCATTTC 7010 30 100.0 34 .............................. GCGCAGTTGCTAGAAATTAGAAATGCACGTGAAT 6946 30 100.0 34 .............................. TTCGCTAGCGTGATATACCCATGCAATCTCTCCT 6882 30 100.0 35 .............................. CAAAGTAGTTGGAAAAATGGAATATAGTATGATAG 6817 30 100.0 36 .............................. ACTTTCAATGGCGGGGCAAAATTCGGGCGAATTTTG 6751 30 100.0 36 .............................. CGAAAGGAGTGTGAGAGAGATGGTAGAAAGCAAAAG 6685 30 100.0 36 .............................. CCTCGATCTTCGTCTCTTTCTGATAGCTCTTCTTCG 6619 30 100.0 36 .............................. CCGGCTTAGATGACGTTGAAAAGCTCAAGTCAATCG 6553 30 100.0 36 .............................. TCCTGAGAAATGGTGAAGGCCTCTACGGTGAATCGA 6487 30 100.0 36 .............................. TCAAGCTGTGGTTCGAATCTACAACTCCTATACACT 6421 30 100.0 36 .............................. GCGAATAAGACGCCAGAAAAGCTTGAGAAAATCCTG 6355 30 100.0 35 .............................. ATTCATTTGACGGGTAATTATAATTTGTTCGTTTA 6290 30 100.0 37 .............................. CTCAGCAATACCAGAACGCGGCATACACTTTGGTTTG 6223 30 100.0 37 .............................. CTCAGCAATACCAGAACGCGGCATACACTTTGGTTTG 6156 30 100.0 35 .............................. CTTTCTCATAATCAGTATAGTCATCTATCTCAACT 6091 30 100.0 37 .............................. ATGCGAATATCAATATTGGCAGTCACCACCTTTGTGC 6024 30 100.0 36 .............................. TGAATGGGCACCGGGTGAGGCGCCGTGGGATACTTC 5958 30 100.0 36 .............................. GTACTTGCAGAGAGGTAACAGTGCACGAAAATAAGT 5892 30 100.0 36 .............................. TACCCAGGCTCATTTGACCTTTTCAACCCCGGAGTA 5826 30 100.0 36 .............................. TTGCCTCGGTGCTTCCGGGAAGCCAGGGAACATCTT 5760 30 100.0 36 .............................. TGGAGCAAATCTAACCGACTTCGCTATGCAATTTAA 5694 30 100.0 35 .............................. GCAATTCTGCAGAGACTAGCTTTCGCAACGTTTCA 5629 30 100.0 36 .............................. TCGAGTTCTTTGAAAGCATCCCGCCAGTCGTGAAAT 5563 30 100.0 36 .............................. GTAGTGCACGAAACCATTTACCATACTCTGAAGTTC 5497 30 100.0 35 .............................. CTTGCTTACACATATGAGGATAATGACTGGGTATA 5432 30 100.0 35 .............................. ATGAGCAGTGGAAGAAAGTCAACGAAGGATCGAGC 5367 30 100.0 36 .............................. TCTCCGTCAGTATATGGCGTAGCGTTTCCTACATAA 5301 30 100.0 35 .............................. CTTGCGGAAGGCTGGCTACCGCTCGTAGATGAACC 5236 30 100.0 33 .............................. GAAACCGTACTATCATGAGCGCAAAAAAATAGG 5173 30 100.0 35 .............................. TTGAGTTCTTTGAAAGCATCCCGCCAGTCGTGCGC 5108 30 100.0 36 .............................. TCTTGATCGGGATCTCAATGGGCCCGGTAGATCCGA 5042 30 100.0 36 .............................. GTAGGAAGCCAGCTCCCAACAAGCACATCGGCAAAG 4976 30 100.0 36 .............................. CCGATCCTTCTTTGATATCGAAGGGCCAGACGGTGA 4910 30 100.0 35 .............................. AAATCCCATTCAGGAAAACGGGTCGAGAGTTTGTC 4845 30 100.0 36 .............................. CTCAAGTACAGATGGACCACCTGACCAATTGGATAG 4779 30 100.0 33 .............................. GAAACCGTACTATCATGAGCGCAAAAAAATAGG 4716 30 100.0 35 .............................. TTGAGTTCTTTGAAAGCATCCCGCCAGTCGTGCGC 4651 30 100.0 35 .............................. CCGGTTTCCTGAACACGATTCCTTTGGAAAAGGGC 4586 30 100.0 36 .............................. TCTCTCCAATTGTTACATCTGCCAGCCCCTTGACGA 4520 30 100.0 36 .............................. TATAGAGGGTAACTGGATTCACGTACGAGACATATA 4454 30 100.0 36 .............................. GCGAATAAGACGCCAGAAAAGCTTGAGAAAATCCTG 4388 30 100.0 36 .............................. CCGGTTTCCTGAACACCATTCCTTTGGGAAAGGGCC 4322 30 100.0 36 .............................. TTCAGCGTTGGCAAGTCAATGTTTGAGAGCTTCAGC 4256 30 100.0 36 .............................. TTGTTCATCATGTTCAAAGGAGGCCTCAAGAGCAGT 4190 30 100.0 37 .............................. TTGTATGTGATATGCTGGCTTGAGCCGGCCATAAAGG 4123 30 100.0 37 .............................. TTCCTGTATTGAAACCTTGGATAGACCAGATAGGATA 4056 30 100.0 36 .............................. CTAGAGCAAATAAAGAGCAACAGAAGCTCGAACATC 3990 30 100.0 35 .............................. CAGCACAAATGAACCGGCCTCCGCAGTTGCCGCCT 3925 30 100.0 37 .............................. TCGCATCATAAACCGCCTTTTCGCCTAATGCCTTAAC 3858 30 100.0 36 .............................. TGTCAAAAAAATATGTTGGTGACGTAGAGGCAGCTG 3792 30 100.0 35 .............................. CGTGGTACTTTCCAACTGGCAGTAATATAGTACTC 3727 30 100.0 35 .............................. TTTGCTAACGTGATATACCCATGTAGTCTCTCTTC 3662 30 100.0 35 .............................. TTTTGTGAGTTAGGAAAAATGGAATCTAACATGAT 3597 30 100.0 36 .............................. TAGTGTCTATAATCGGCTATTCAAGTTAACATTGGA 3531 30 100.0 35 .............................. CGATGCAGAGATGCTTCTCTAAAGGAGCCGTTTCC 3466 30 100.0 36 .............................. CTATATTTAATCGAGGGAGTCGGAGGAATGAAGAGA 3400 30 100.0 35 .............................. CTTGTTCTCTATCAGTAAATAGACCTTTCTCTATT 3335 30 100.0 35 .............................. GATTATTGCCCTATCAGTCGGATCCGCTTTCTCCA 3270 30 100.0 36 .............................. CTTGCTACTTAGACTCACGCGCATTTCTAATGGTCA 3204 30 100.0 37 .............................. TCTATGAACCATGTGACCACTATGGAGGCATATCCTA 3137 30 100.0 37 .............................. CAGCTGCAACCGTGGAGCATCTCGGACAGAACGGATC 3070 30 100.0 39 .............................. TGGGAGAGGACTTTGCGTGGCTAACGGGGCTCTTGACAG 3001 30 100.0 33 .............................. TTTCCCATCTCAAAGAAAAGATAGGTGGCTTTC 2938 30 96.7 38 .......................C...... TAGAAAAATTGGCAAAGTTTTATATTCCGCAGGAGCAT 2870 30 100.0 35 .............................. TTTCAAAGAACGAAGCGTGGGATGTATTTCTTTCA 2805 30 100.0 34 .............................. AGTGCTACTACTTCAGGGCTTCACGGCGGTTCTT 2741 30 100.0 36 .............................. ATCGGGTAATTTATAGCTGGGTGTGAGTTATAAATC 2675 30 100.0 35 .............................. TTTGAAATGTATCGACAAATGATACTAACTGAAGG 2610 30 100.0 35 .............................. TTTTGCGGACACAAGCGGGACATTCAAAGCATATC 2545 30 100.0 36 .............................. CCAGAGCAAATAAAGAGCAACAGAAGCTCGAACATC 2479 30 100.0 34 .............................. TCTGCCACGTGGACAAGCTCTTGCCCTCTGTAGA 2415 30 100.0 36 .............................. CCGGATTTCTGAATACGATTCCTTTGGAAAAGGGTC 2349 30 100.0 38 .............................. GTTAGGTACACTACTATACTATACTACTAAGTACACGT 2281 30 100.0 35 .............................. GTGAGTCAGAGTTGGCTACAAGTCTAGAAATTAGG 2216 30 100.0 36 .............................. CTTGCTACTTAGACTCACGCGCATTTCTAATGGTCA 2150 30 100.0 36 .............................. TGTTATCGATGGAATCTCGTTCTCTTCTCATCCATA 2084 30 100.0 36 .............................. TAGTATCCTAAAGTGAAGGCGGTGTGTAAGTATGAG 2018 30 100.0 35 .............................. TTAATGAGTCGGAGCTAGCTACAGACCTTGAAATT 1953 30 100.0 35 .............................. CGCTACCGATCCCGACTATGCGAAGAAGCTGACAA 1888 30 100.0 38 .............................. TTGCCTTTTTCTCTGTTAATGTAACCATGTTCTATCCC 1820 30 100.0 37 .............................. CCCCGATTTTGAAATTTCCCCCAACATTCAGGGAAAT 1753 30 100.0 35 .............................. TTCGAAATGTATCGAAAAATGATATTAATCGAGGG 1688 30 100.0 36 .............................. CAAAAGAGATCTCTTTTTTTTGCGCTCTTATCCTGG 1622 30 100.0 35 .............................. TAACTGATGAGCTGCCAGAAGATATAATAGTGTGG 1557 30 100.0 35 .............................. ACTAAAATTAGGCATTTTTAGCCTAAATCTATATA 1492 30 100.0 35 .............................. ATGAAATATCTATCCATTCCCCAACATTAGTAGCA 1427 30 100.0 37 .............................. CCCCGATTTTGAAATTTCCCCCAACATTCAGGGAAAT 1360 30 93.3 0 .......................C....T. | ========== ====== ====== ====== ============================== ======================================= ================== 139 30 99.9 36 GCTCCCAGACTACCTATGAGGAATTGAAAC # Left flank : GCTCTTTTGAGCTTGGAGTTCTTCCAAGGTGCGATAGAGATCAAATTGAAGAGCAGCTTAAGGCTGTCCTTTCAATTATGAGCAACTTTGGTTCTCGAGGGGCTAAGCCCCAATTTGGTAATGGCCTCTTTGAACTCACTGATGATACAGGAGAACCAATAGAATCACTTCGGATGATCAACAGATTCCTTAAGGAAAATTGCTTTATCAAAAAAAGCGATCACAAGAAAGGCTTTTCGCTGAAGAACTACTGGAAAATCGAGACAGAAGTTGGAAAATCTCTTCCACCAGCGAACCTGAAGTATGTGGGCAGAGAAGTTAAGAACTTGTATATCCCGTCGACCCCTGATTCATGGAAAACACCGGGGGATCGACAGAAATACTAGAATTTTGTTCTTCCATTGTAAATGGGATTTATAAGACATTGGTCTTTGAAAAACAGGCATGAACATAATTTGCCTCAAAACACTGAAAATACTATATAATCTATATAATAATGG # Right flank : TTGAGAGAGAGTTCAATGAACTGGTCAAGGACTGCAGCTTGGGACATTTTACAAACTAGAGACATATTGGTTCAGTAGTCTACGGAAAAGGATCAAAGAGATATCACTAAAAGAGCAGGAAGGATCTCTCTTCCTTCCTGCCGTTAGGGTGTGTGAGTGGAGCAGTTGCAAGGGAAAACCAGTTGCAAGTGCCAAGTTGTGAGTTGCAAGAATAAGAGCTGCTGTACGCTGGAATAGCGGTCCTCGGTCAGCCGTCATCGGTCCTCCGATTTTTCAAGAGATTTGGAGAGTTTCCAGAGCATTCTATTAATGCTTTCGGCCTTCCTCTCGATTAGTTCAAGCTGATTTCGATTCATATAGCCAAACTCAAAGGAAATCTCAAGCTGGGCAACCGTCTCGTTCAGAAAATCCGCTTTACGATGCCTGCTGATCGCTGGAAAGACCGCTTTACTCTAAGAACCCGCCGAACGATAAAGGACAAGCTACCTGGGTAATGACTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCCCAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //