Array 1 2805017-2808372 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNAY010000001.1 Chryseobacterium sp. C-17 Seq1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 2805017 46 85.1 30 A..C.-T..G..A..A............................... CCGGAAATTTAAGATTAAAATATTTCTTAT 2805093 47 100.0 30 ............................................... CGGAACCTATATTGTCATTACAATCGGTGT 2805170 47 100.0 30 ............................................... TTTGGCAATTTAGCATATCCGCCAATGTGA 2805247 47 100.0 30 ............................................... TACGACTGAAGTCATAATAGACACGCCATT 2805324 47 100.0 30 ............................................... CTTATATATGTTTTTCTCGCCTCCATATGT 2805401 47 100.0 30 ............................................... TGAGCGTTTTTTGTTTCTGTACATGATAGT 2805478 47 100.0 30 ............................................... TATCTTGGGGAGTACGTTACAAGTGTACGA 2805555 47 100.0 30 ............................................... GTTTCCTCGTATCTTCCCCCTCCGTATGAT 2805632 47 100.0 29 ............................................... CACTCTTAAAGAGAAGACAATCTCTAAAG 2805708 47 100.0 30 ............................................... CTTTAATTTGTTCTAAAATTTTGTACATAA 2805785 47 100.0 30 ............................................... ATTCCGAATACCGCTGCAATTACTCGTTTG 2805862 47 100.0 30 ............................................... AAGAAAATCAGCCGATAAAACATTTGGTGA 2805939 47 100.0 30 ............................................... ACATCAAAACTTTCTAAAGGAAGCTCTGCC 2806016 47 100.0 30 ............................................... ATTTTTTCAGATGTTTGCTTTGCCATAATT 2806093 47 100.0 30 ............................................... TCTAAACCTGAATCGATGCTTATCTGATTT 2806170 47 100.0 30 ............................................... TCAGCTCCCAAATTCTCGCATCTATAATTG 2806247 47 100.0 30 ............................................... AAAAAAGGCGAAAAGTTTGCGATACCAATT 2806324 47 100.0 30 ............................................... TTAAGGTCACCACGGTTAATTTCAAATTGA 2806401 47 100.0 30 ............................................... ACTTAAATTATATCTACGCTAAATACGATA 2806478 47 100.0 30 ............................................... CATTAGCTTTTTTTGGAGTGGGCGTACCCG 2806555 47 100.0 30 ............................................... AGATCTTCATTCAACGTGTTAATGACTAAC 2806632 47 100.0 30 ............................................... AATTTCGCATTAGCATATATTAAACTTGTA 2806709 47 100.0 30 ............................................... ACTCATGAAAAGGAATTAAAAAAGGAGTCT 2806786 47 100.0 30 ............................................... CTTTTTTGAAATTGGATCTGATAAGAGTTT 2806863 47 100.0 30 ............................................... ATCAAACAAAAAATTGAAGTTGTTGTTTCT 2806940 47 100.0 30 ............................................... CTAGGGGATTAGGTGCTTCAGACGTTGGAG 2807017 47 100.0 30 ............................................... CCGATTCTTGTGAAAAGCCATTAACGGGAA 2807094 47 100.0 30 ............................................... TGAGCTTCCACTTTCTGCCATTGCTTTTTT 2807171 47 100.0 30 ............................................... ATTTGATTTGTTCCGTTCCGTTTACTCCGT 2807248 47 100.0 30 ............................................... ATTAGTCAACCAATTTCGCCAGTCTTGAGT 2807325 47 100.0 30 ............................................... GGTAACTAAAGAGATTGAAGATTCTTACTT 2807402 47 100.0 30 ............................................... CATACGGGTCTGGAATGTAAATTGGATTGC 2807479 47 100.0 30 ............................................... GAGCTTTTTTTCTCTAACAAAAACTAATAA 2807556 47 100.0 30 ............................................... TGTAGAGATTTACGTTTGATTGATTAAGTA 2807633 47 100.0 30 ............................................... CCAGTTGACTGATAAAACATAGCCCAAAAG 2807710 47 100.0 30 ............................................... AAAAGAGGAATAGACTTCGTTGGCTACGTT 2807787 47 100.0 30 ............................................... AGTGAGAAAATAGACAAGAATTACCAATGC 2807864 47 100.0 30 ............................................... AAAACCATTCAATCTGAAATAGCTTTATTG 2807941 47 100.0 30 ............................................... TAGCGCTTAAGCTATTTGCATAATCTACCC 2808018 47 100.0 30 ............................................... AATTTTCATCTGGAAAGCTTTGGCCAGAGT 2808095 47 100.0 30 ............................................... TCGAACAAGCTGCATCAAAAGACTTCGCCG 2808172 47 100.0 30 ............................................... TTAAAATTTGAATTCCCGTTTATTTGGAAG 2808249 47 100.0 30 ............................................... CGTCTACGGTATATTTACACGGTGGTTTTA 2808326 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 44 47 99.7 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Left flank : GTATATAAAAAATCATTGGTTTATAATGTTCGTTAAAGATACATGAATTCGCACAAGAACTTCCATTTCCTAAAGATTGCAAAGGTTTTTCTATTTTTGCAATACTCAAACAACAAAATTAATGACGATACATGATTTGGCAGGAAGCTATTCTATTCAGGGAAGCAATCAAGTAGAAAGCAATGAAATTACCTACCAAGGAATTCTCACCCTCTCTCTGGATGAAAACAACAGAATCGTTGCTCAATGGATGATTGATGACCATATTCAGAATGGAAAAGGTTTTTATAAAGATGAAATTTTAGTTATCAATTTTAATTACGAAAGTGAAGACGAAATAATTTATAAAGGTGTTGCTGTTTATCATTGTATCAATAAAAACATTTTGGATGGCTTCTGGTCTGAGAAACACGGTAATCCTCTCTATCTTGGAAGTGAGTACTGCGTAAGAATCAACACCTCTGAGTTTTTAAACTGATATTTTAAAATGAAACTTTGAT # Right flank : CCTCAAAATTTAACCCATTGTTTTTCAATGGGTTTTGTTGTTTTTTAGGATTTGGAATTTAGAATAATTCGAGTTGCTGGAAGGTCGGAGGTGGCTCTTCTTTGTTTCTGGCAAAAAATATTTCTATGTCTCCAAATTGCTTATCGGTAATGCACATGATGGCTACTTTTCCTGCTTTTGGAAGATTAAACTTTGTTCGTTTGATGTGTACCTCAGCGTTTTCACGACTTGGGCAGTGGCGAACATACATCGAGAACTGAAAAAGGGTAAACCCATCATCAAGCAAACCTTTACGAAAGCGGTTGGCGTCTTTCATATTGGTTTTCGTTTCGGTTGGTAAATCGTATAGCACTAAAACCCACATAATTCGGTAAGCGTTAAACCTTTCGGAATTCATATTTTGCTGAAATATTATTTTTTGGTACTCATCTTCTAATTTTGCTGGAGTTGCAGCCCGGCTTGAGCGGAAATCCTTTTTTTTTGCGAAGGAAAAAGCCTCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //