Array 1 216320-217015 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFEMJ010000014.1 Pediococcus acidilactici strain C6 NODE_3_length_335604_cov_173.868885, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 216320 36 100.0 30 .................................... TCACTAAGTCAATTGCTGGGTACACTCCGG 216386 36 100.0 30 .................................... GCTTTTTTAATTTAAAATATTTTAATTCTT 216452 36 100.0 30 .................................... GGTTATCGTCATCATCATGGAGAAGATATC 216518 36 100.0 30 .................................... TACTTGCAACAAGAATTTACCAACGATGAA 216584 36 100.0 30 .................................... TGGTTGCCGGTGTTCCAATCTGATATTTGG 216650 36 100.0 30 .................................... TGGTGTTTTCACCCGGTTTTGGAACACTGT 216716 36 100.0 30 .................................... ACTACAACTTCTACTTCTAAAGAGGTACCA 216782 36 100.0 30 .................................... TAAATTTTCAAGCGCGCCGTTATTGAGTTC 216848 36 100.0 30 .................................... TAGCCATATTCCCTTTTTCTAACTTAATCA 216914 36 100.0 30 .................................... ACTAGATGAGAACAATGGCTTTGAAAAGTT 216980 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 99.5 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGAGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATAGGTAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCGATAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : CTGACTGAAATTAATAAGAGTTAATGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCGCTCGAAATGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGCTATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //