Array 1 12541-14155 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMYI01000008.1 Streptococcus salivarius strain BIOML-A10 scaffold8_size99807, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 12541 36 100.0 30 .................................... TGTTCAGTTCTTTTGGTCGTACAATCCACC 12607 36 100.0 30 .................................... AATCGAATACAAGAGAATCGATACAGTTCT 12673 36 100.0 30 .................................... TAAAATGTGACAAGTAATATCATAATCAGC 12739 36 100.0 30 .................................... CACAGCCAGAAGATGAAGTGTATGGCTACT 12805 36 100.0 30 .................................... ATCTGAGAGGTATTTCTGATTGGTATGATC 12871 36 100.0 30 .................................... TATTGACGGCTCCATCTGTTGTCCACGTCG 12937 36 100.0 29 .................................... TTTTTTTATTCCTTCCCTCTTTTCCCCTC 13002 36 100.0 30 .................................... TCTATAAATGGTTTGATGATGTAAAAAATG 13068 36 100.0 30 .................................... CTGATGTCTTCCCTTCGTCTTGACTTGGCG 13134 36 100.0 30 .................................... AAAAGCCCTTTGCATTGTTTCAATAACCTT 13200 36 100.0 30 .................................... CATAGTAACGTCTTACTGGAGTGTCTGCGT 13266 36 100.0 30 .................................... TACAATGGCATTCATCTCAGCATGCACCGC 13332 36 100.0 30 .................................... AGACTAAGCGACTTGTCAAAGGTGCTAAAT 13398 36 100.0 29 .................................... TTTCTCTTTAGTACCGTCACCGTCGAAGT 13463 36 100.0 29 .................................... AAGCTCATGCAGGGCATTGGGTCGGTGTT 13528 36 100.0 30 .................................... CTCTAGGTTTGACAACAGAACAATTCTTGA 13594 36 100.0 29 .................................... TTCATGGACAGCTACAAGGATGTCAATTT 13659 36 100.0 30 .................................... CGGTTTTACAAGTAATCGTGCAAGGTATCC 13725 36 100.0 30 .................................... ACTGGTCTATTCGTTTTAAAAACCGTGCAT 13791 36 100.0 30 .................................... ACAAGGGCAATCCTAAAGTCGAATGGATGA 13857 36 100.0 29 .................................... GAGGTGATAATAATTGCCGATATTTAATT 13922 36 100.0 30 .................................... CCACTAATGCGGACGGCAGAAAGAACGGTG 13988 36 100.0 30 .................................... CTGAGTTGTTACCGATAGAACCGACGCCCT 14054 36 100.0 30 .................................... CGCAGTTAGTTGAGAATGACACGACATTCC 14120 36 94.4 0 ..................................GT | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.8 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TTGATAGTTTTGTCTCAGAGGAATCTTATGATAGTTTTTATAAGAAAATTGGTCAGCTAGCCCAAAAGTATCCAAACCTAAACTTTATTTTGTTTCCTAGTGACCAAGGATATCTAAAGATTGACGAGGAAAGTAGTAGGTTCGTCAATATTTTATCTGACCAGGTGGAGCATTTGTACGATGTTGAGTTTATGTATGAAAGGGTAAAGAAACATTATCCAAGTAATAATTTTCCGACGCGAGAAGGTTTTAGGATGTCCTTAGAGACTGTGACGCCTTATTTGTTAACAAAAATGACGAGACAACCTAGTCTCTCACTCGTTGATTCAGTAATTTTGAATATCTTAAATCAGTTGTTTCACTTTAACTATTGTATAAGATATTCTCAGACACCTGATGAGGAGCTATTACATAGATATTTAAAAAGTAAGAATTGACAAGTACAGTGATTGATTCTATAATCACTATGTGGGTATAAAAACGTCAAAATTTCATTTGAG # Right flank : TTTGATTCAACTTAAAAAGCCAGTTCAACTGAACTTGGCTTTTTAAAATACACGATATACATAAGGATTGTCAGGCTGTCCGACCTCTTTGACCTCAGTCAAATTAAGGATAGGCAGGCTCTGTTTGAGATTTTGATAATAATCCACAGTGATGGTACCAGTGACTTTCACCCAAGTATTGTCCTTGAAGGTTTGGTCACTTCCTGTCGTTGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATTCCGAAACGGAAGATGAACTGATAACCCTTGGTTTGTGGGTCATTGTAGACAAAACCGGTATAGGTGACCTTCTTGCCCACAAAATCGTTAGGATAGAGGTAGATGAGCTCCATGACTTCCATGTAATTTTCCGTGGTAATCTGGATGGTCTCACGTCCCTTGTACTTGGCGAGCTCTCTGGTCATTTCCTTCTCATAAGCTGAGGAGGTGAAGTAGGAGCTGGTGTCTGGCTTCAAGTACTGAATAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //