Array 1 276828-278181 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALTQ01000019.1 Streptococcus agalactiae GB00588 ctg7180000003533, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 276828 36 100.0 30 .................................... TTTAGGAATTCCAACGCCGTTAGCATATTT 276894 36 100.0 30 .................................... AACTTATCTATTTCTACTTAAAAACTGATT 276960 36 100.0 30 .................................... AACTTATCTATTTCTACTTAAAAACTGATT 277026 36 100.0 30 .................................... AACTTATCTATTTCTACTTAAAAACTGATT 277092 36 100.0 30 .................................... AACAATGGTTTTTACAGTGTTGACCGCATT 277158 36 100.0 30 .................................... TGTTTTTTCTTTCCATATGTGGTGGCTTTC 277224 36 100.0 30 .................................... AAAAGAACTCTATAATCAACGTCATACTAT 277290 36 100.0 30 .................................... TCAAGAGCGAGTTTACTGGTTTGAGGCTTA 277356 36 100.0 30 .................................... TCATTGCTGTATATGAGAGTATGTCAGTTT 277422 36 100.0 30 .................................... CAATCATCCTTCTAACCTTTCTAGTAATTC 277488 36 100.0 30 .................................... ACCAACAAGTTCATTATGAACCTCGAACGT 277554 36 100.0 30 .................................... ATAAGCACCAAGTTCTCGCGTTACTCGCGA 277620 36 100.0 29 .................................... GTACCATCTATCAATTTACCGCAAGCTGT 277685 36 100.0 30 .................................... CAATGTCCTATTGAATTATTAGTAGCACAA 277751 36 100.0 30 .................................... TTAAAAGATTTAAACTATCAAGCGTCAATT 277817 36 100.0 30 .................................... TTTCTTGAGGTCGTCACGAAATTGTTTTGT 277883 36 100.0 30 .................................... AATCCTCCTTTTAGTTTGAATTCTACTTCT 277949 36 100.0 30 .................................... ATTAGCCCTGCAATACTCGCAATGACCGCA 278015 36 100.0 29 .................................... TTTTACCAATGCTTCCATATCGCTTATAT 278080 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 278146 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //